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Commit Graph

1555 Commits

Author SHA1 Message Date
Kyle Guinn 5cf028d0cd academic/octave: Updated for version 4.2.0. 
Signed-off-by: Kyle Guinn <elyk03@gmail.com>
 2016-12-04 19:28:56 +00:00
Kyle Guinn b3fc4f2027 academic/spqr: Updated for version 2.0.7. 
Signed-off-by: Kyle Guinn <elyk03@gmail.com>
 2016-12-04 19:28:56 +00:00
Kyle Guinn 9a81dc9adc academic/umfpack: Updated for version 5.7.6. 
Signed-off-by: Kyle Guinn <elyk03@gmail.com>
 2016-12-04 19:28:56 +00:00
Kyle Guinn 36c393d6dd academic/klu: Updated for version 1.3.8. 
Signed-off-by: Kyle Guinn <elyk03@gmail.com>
 2016-12-04 19:28:56 +00:00
Kyle Guinn 5d13a1088d academic/cholmod: Updated for version 3.0.11. 
Signed-off-by: Kyle Guinn <elyk03@gmail.com>
 2016-12-04 19:28:56 +00:00
Kyle Guinn 0fb73f8315 academic/rbio: Updated for version 2.2.6. 
Signed-off-by: Kyle Guinn <elyk03@gmail.com>
 2016-12-04 19:28:56 +00:00
Kyle Guinn dbcd6295df academic/btf: Updated for version 1.2.6. 
Signed-off-by: Kyle Guinn <elyk03@gmail.com>
 2016-12-04 19:28:56 +00:00
Kyle Guinn 2faa53bf58 academic/ldl: Updated for version 2.2.6. 
Signed-off-by: Kyle Guinn <elyk03@gmail.com>
 2016-12-04 19:28:56 +00:00
Kyle Guinn 50100e1876 academic/cxsparse: Updated for version 3.1.9. 
Signed-off-by: Kyle Guinn <elyk03@gmail.com>
 2016-12-04 19:28:56 +00:00
Kyle Guinn 2855967923 academic/csparse: Updated for version 3.1.9. 
Signed-off-by: Kyle Guinn <elyk03@gmail.com>
 2016-12-04 19:28:56 +00:00
Kyle Guinn b11534756d academic/ccolamd: Updated for version 2.9.6. 
Signed-off-by: Kyle Guinn <elyk03@gmail.com>
 2016-12-04 19:28:56 +00:00
Kyle Guinn 3116f65b5d academic/colamd: Updated for version 2.9.6. 
Signed-off-by: Kyle Guinn <elyk03@gmail.com>
 2016-12-04 19:28:56 +00:00
Kyle Guinn fbccb9e8dc academic/camd: Updated for version 2.4.6. 
Signed-off-by: Kyle Guinn <elyk03@gmail.com>
 2016-12-04 19:28:56 +00:00
Kyle Guinn 640897d194 academic/amd: Updated for version 2.4.6. 
Signed-off-by: Kyle Guinn <elyk03@gmail.com>
 2016-12-04 19:28:56 +00:00
Kyle Guinn d1283f4227 academic/suitesparseconfig: Updated for version 4.5.3. 
Signed-off-by: Kyle Guinn <elyk03@gmail.com>
 2016-12-04 19:28:56 +00:00
Kyle Guinn 2cd63223ba academic/arpack-ng: Updated for version 3.4.0. 
Signed-off-by: Kyle Guinn <elyk03@gmail.com>
 2016-12-04 19:28:56 +00:00
Kyle Guinn e43491d02a academic/metis: Updated for version 5.1.0. 
Signed-off-by: Kyle Guinn <elyk03@gmail.com>
 2016-12-04 19:28:56 +00:00
T3slider 89d49d2bdf academic/kurso: Switch to i586. 
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
 2016-12-04 06:28:58 +07:00
Pedro Mendes 004c02b09e
academic/copasi: Updated for version 4.18.136. 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2016-12-03 07:17:45 +07:00
Petar Petrov 922f8ab700
academic/zotero: Updated for version 4.0.29.10. 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2016-12-03 07:17:45 +07:00
Petar Petrov 551941e398
academic/spades: Updated for version 3.9.0. 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2016-12-03 07:17:45 +07:00
Petar Petrov e73e9e4eb1
academic/jalview: Updated for version 2.10.0b1. 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2016-12-03 07:17:45 +07:00
Petar Petrov 1f80605865
academic/mafft: Updated for version 7.305. 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2016-12-03 07:17:45 +07:00
Petar Petrov baca6beb0c
academic/HMMER: Added (biosequence analysis). 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2016-12-03 07:17:45 +07:00
Petar Petrov 0bb3efdbae
academic/ugene: Updated for version 1.25.0. 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2016-12-03 07:17:45 +07:00
Petar Petrov 1f0c859cff
academic/staden: Updated for version 2.0.0b11. 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2016-12-03 07:17:45 +07:00
Petar Petrov a4759dfac8
academic/seaview: Updated for version 4.6.1.2. 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2016-12-03 07:17:45 +07:00
Petar Petrov 475411e46f
academic/pamlX: Build bump for paml-4.9c. 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2016-12-03 07:17:45 +07:00
Petar Petrov 8b5da50bf5
academic/paml: Updated for version 4.9c. 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2016-12-03 07:17:45 +07:00
Petar Petrov 8688ebd442
academic/io_lib: Updated for version 1.14.8. 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2016-12-03 07:17:45 +07:00
Petar Petrov 23bc94dcfa
academic/PhyML: Updated for version 3.2.20160530. 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2016-12-03 07:17:45 +07:00
Petar Petrov e7ceeeca4f
academic/genometools: Updated for version 1.5.9. 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2016-12-03 07:17:45 +07:00
Petar Petrov 9470ff4b61
academic/gchemutils: Updated for version 0.14.16. 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2016-12-03 07:17:45 +07:00
Petar Petrov ea0545c0f0
academic/cutadapt: Updated for version 1.11. 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2016-12-03 07:17:45 +07:00
Petar Petrov f91764fcf2
academic/clustalo: Updated for version 1.2.3. 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2016-12-03 07:17:45 +07:00
Petar Petrov 8d79c453ce
academic/bwa: Updated for version 0.7.15. 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2016-12-03 07:17:45 +07:00
Petar Petrov e3ea54d6f0
academic/bedtools: Updated for version 2.26.0. 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2016-12-03 07:17:45 +07:00
Petar Petrov 3a448854ee
academic/archeopteryx: Updated for version 0.9917_beta. 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2016-12-03 07:17:45 +07:00
Petar Petrov bcc8330bee
academic/PhyTime: Added (Phylogenetic estimation). 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2016-12-03 07:17:45 +07:00
Daniil Bratashov 5c838bc753
academic/ghemical: SlackBuild updates. 
Multilib libdir slackbuild patch from Akio Nishimura.
Enabled threads and openbabel.

Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2016-12-03 07:17:45 +07:00
Glenn Becker 495d19745f academic/mendeleydesktop: Updated for version 1.17.4. 
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
 2016-12-02 07:42:01 +07:00
Willy Sudiarto Raharjo 2a406c5075 academic/sage: Downgraded to 7.2. 
Built in python was compiled against UCS-4.
Slackware's readline is not linked to ncurses, causing
problems similar to here: https://bugs.archlinux.org/task/39731.

We will try to bump sage in the next Slackware release
when everything is fixed, including Python that is
compiled against UCS-4.

Adding a note for now.

Thanks to Mehran Hosseini for the bug report.

Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
 2016-11-28 05:43:35 +07:00
Pedro Mendes 37854d6e4d
academic/copasi: Updated for version 4.17.135. 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2016-11-26 11:47:24 +07:00
Petar Petrov 592919638f
academic/perlprimer: Updated for version 1.1.21. 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2016-11-26 11:47:24 +07:00
Daniil Bratashov c66c896ae1
academic/gwyddion: Updated for version 2.47. 
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
 2016-11-20 06:50:59 +07:00
R. S. Ananda Murthy 5c0a466b6f
academic/sundials: Updated for version 2.7.0. 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2016-11-19 07:31:28 +07:00
R. S. Ananda Murthy fe7e13846b
academic/lpsolve: Updated for version 5.5.2.5. 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2016-11-19 07:31:28 +07:00
B. Watson 4901fd0ca0
academic/clustalo: Fix README. 2016-11-15 21:41:38 +07:00
B. Watson bccf1f3d88
academic/cutadapt: Fix README. 2016-11-15 21:41:38 +07:00
B. Watson dc248e8bc1
academic/WordNet: Fix README. 2016-11-15 21:41:38 +07:00