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2133 Commits

Author SHA1 Message Date
Kyle Guinn cf2810ddb2 academic/ldl: BUILD bump for SuiteSparse 5.2.0. 
Signed-off-by: Kyle Guinn <elyk03@gmail.com>
 2018-03-24 06:50:39 +07:00
Kyle Guinn dc8c1c24bf academic/cxsparse: BUILD bump for SuiteSparse 5.2.0. 
Signed-off-by: Kyle Guinn <elyk03@gmail.com>
 2018-03-24 06:50:39 +07:00
Kyle Guinn ba1a8cc2de academic/csparse: BUILD bump for SuiteSparse 5.2.0. 
Signed-off-by: Kyle Guinn <elyk03@gmail.com>
 2018-03-24 06:50:39 +07:00
Kyle Guinn c67df6116b academic/ccolamd: BUILD bump for SuiteSparse 5.2.0. 
Signed-off-by: Kyle Guinn <elyk03@gmail.com>
 2018-03-24 06:50:39 +07:00
Kyle Guinn c8777e8ce4 academic/colamd: BUILD bump for SuiteSparse 5.2.0. 
Signed-off-by: Kyle Guinn <elyk03@gmail.com>
 2018-03-24 06:50:39 +07:00
Kyle Guinn 603ee76258 academic/camd: BUILD bump for SuiteSparse 5.2.0. 
Signed-off-by: Kyle Guinn <elyk03@gmail.com>
 2018-03-24 06:50:39 +07:00
Kyle Guinn 13f22a8114 academic/amd: BUILD bump for SuiteSparse 5.2.0. 
Signed-off-by: Kyle Guinn <elyk03@gmail.com>
 2018-03-24 06:50:38 +07:00
Kyle Guinn 66cd50425f academic/suitesparseconfig: Updated for version 5.2.0. 
Signed-off-by: Kyle Guinn <elyk03@gmail.com>
 2018-03-24 06:50:38 +07:00
David Spencer 0573a9381c academic/WordNet: Switch homepage to https. 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2018-03-17 13:58:49 +00:00
Christoph Willing 47fcfad833 academic/suitesparse: Updated for version 5.2.0 
Signed-off-by: Christoph Willing <chris.willing@linux.com>
 2018-03-17 08:51:57 +07:00
melikamp 4ef39c2fcc academic/R: Updated for version 3.4.4. 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2018-03-17 08:51:50 +07:00
Fellype do Nascimento 4aed16176b academic/veusz: Updated for version 2.2.1. 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2018-03-17 08:51:47 +07:00
Benjamin Trigona-Harany 3ed6b53354 academic/cld2: Fix build on current. 
Signed-off-by: Benjamin Trigona-Harany <bosth@alumni.sfu.ca>
 2018-03-17 08:51:42 +07:00
Matteo Bernardini 8038d5c351 academic/tkgate: Mirror download url. 
Signed-off-by: Matteo Bernardini <ponce@slackbuilds.org>
 2018-03-10 07:11:14 +07:00
Matteo Bernardini aeb06159f3 academic/avogadro: Mirror download url. 
Signed-off-by: Matteo Bernardini <ponce@slackbuilds.org>
 2018-03-10 07:11:14 +07:00
David Spencer 54389e6f0f academic/papi: Fixed ownership. 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2018-03-10 07:11:02 +07:00
David Spencer 65d940ffc7 academic/xflr5: Fix slack-desc, add doinst.sh. 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2018-03-10 07:11:01 +07:00
Matteo Bernardini 8d88089e15 academic/qtoctave: Mirror download url. 
Signed-off-by: Matteo Bernardini <ponce@slackbuilds.org>
 2018-03-06 02:04:16 +07:00
Matteo Bernardini a9e6cfef57 academic/paml: Mirror download url. 
Signed-off-by: Matteo Bernardini <ponce@slackbuilds.org>
 2018-03-06 02:04:16 +07:00
Matteo Bernardini 4a4286f571 academic/artha: Mirror download url. 
Signed-off-by: Matteo Bernardini <ponce@slackbuilds.org>
 2018-03-06 02:04:16 +07:00
Willy Sudiarto Raharjo 1d23160fbf academic/galculator: Fix download url. 
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
 2018-03-06 01:27:35 +07:00
Willy Sudiarto Raharjo 63b78f9b41 academic/avogadro: Update download url. 
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
 2018-03-05 01:16:19 +07:00
Willy Sudiarto Raharjo c5b4656585 academic/tkgate: Update download url. 
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
 2018-03-05 01:16:18 +07:00
Matteo Bernardini ddb8bf0302 academic/smath-studio: Fix download urls. 
Signed-off-by: Matteo Bernardini <ponce@slackbuilds.org>
 2018-03-03 08:42:14 +07:00
Matteo Bernardini ecac82298b academic/calc: Fix download url. 
Signed-off-by: Matteo Bernardini <ponce@slackbuilds.org>
 2018-03-03 08:42:14 +07:00
Matteo Bernardini 66ae7bd28b academic/artha: Fix download url. 
Signed-off-by: Matteo Bernardini <ponce@slackbuilds.org>
 2018-03-03 08:42:14 +07:00
Matteo Bernardini 85a07c95f6 academic/PhyML: Fix download url. 
Signed-off-by: Matteo Bernardini <ponce@slackbuilds.org>
 2018-03-03 08:42:14 +07:00
Matteo Bernardini 6548134514 academic/Gblocks: Fix download url. 
Signed-off-by: Matteo Bernardini <ponce@slackbuilds.org>
 2018-03-03 08:42:14 +07:00
Fellype do Nascimento f912197242 academic/veusz: Updated for version 2.2. 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2018-03-03 08:42:06 +07:00
Daniel Prosser 227e215a23 academic/xflr5: Added (analysis tool for airfoils, wings, planes). 
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
 2018-03-03 00:04:22 +07:00
Willy Sudiarto Raharjo 274e5f8901 academic/qtoctave: Update download url. 
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
 2018-03-02 08:17:42 +07:00
Willy Sudiarto Raharjo 7d9573e554 academic/pyfits: Update download url. 
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
 2018-03-02 08:16:03 +07:00
Willy Sudiarto Raharjo dbcf1189bb academic/ncbi-blast: Updated downloar urls. 
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
 2018-03-02 08:15:00 +07:00
David Spencer 70c042e5c3 academic/engauge: Fixed build with openjpeg-2.3.0. 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2018-02-18 10:35:26 +00:00
Petar Petrov 19a57c0c92 academic/aliview: Added (Alignment viewer and editor). 
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
 2018-02-17 07:42:47 +07:00
ulivo1991 c642ff126d academic/qcl: Added (A Programming Language for Quantum Computers). 
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
 2018-02-17 07:42:46 +07:00
Vincent Batts 0468c85f60 academic/genius: Updated for version 1.0.23. 
Signed-off-by: Vincent Batts <vbatts@hashbangbash.com>
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
 2018-02-17 07:42:45 +07:00
R.S.Ananda Murthy ddaa0d86a4 academic/fet: Updated for version 5.35.2. 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2018-02-10 08:09:31 +07:00
Daniil Bratashov 91cf3cccf6 academic/gwyddion: Updated for version 2.50. 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2018-02-10 08:09:29 +07:00
Rob van Nues 22da25f287 academic/novocraft: Updated for version 3.08.02. 
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
 2018-01-27 07:43:47 +07:00
Rob van Nues faca3e09ed academic/pysam: Updated for version 0.13.0. 
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
 2018-01-27 07:43:46 +07:00
David Spencer 9fd54788e4 academic/speedcrunch: Fixed tarball handling. 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2018-01-21 11:35:28 +00:00
R.S.Ananda Murthy 8f3b25fd70 academic/fet: Updated for version 5.35.1. 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2018-01-20 12:46:40 +00:00
Alexander Verbovetsky 763b6e1cec academic/reduce-algebra: Updated for version 20180117svn4372. 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2018-01-19 22:51:55 +00:00
Fernando Lopez Jr f49981519e academic/ZeGrapher: Added (math graphing). 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2018-01-19 11:45:00 +00:00
Tim Dickson 9df0f5151f academic/sword-data-kjv: Updated for version 1.8.1. 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2018-01-17 19:46:31 +07:00
Tim Dickson 0f3b649305 academic/sword: Updated for version 1.8.1. 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2018-01-17 19:46:31 +07:00
Petar Petrov 29b8cd0625 academic/trfind: Fix executable for use with RepeatMasker. 
Sorry Petar :(

Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2018-01-17 19:46:30 +07:00
Larry Hajali b95abc4f9b academic/speedcrunch: Updated for version 0.12.0 
Signed-off-by: Larry Hajali <larryhaja[at]gmail[dot]com>
 2018-01-17 19:46:27 +07:00
Larry Hajali e897805880 academic/qalculate-gtk: Updated for version 2.2.0 
Signed-off-by: Larry Hajali <larryhaja[at]gmail[dot]com>
 2018-01-17 19:46:27 +07:00
Larry Hajali 021c5a3a36 academic/libqalculate: Updated for version 2.2.0 
Signed-off-by: Larry Hajali <larryhaja[at]gmail[dot]com>
 2018-01-17 19:46:27 +07:00
Petar Petrov 08da4a154d academic/RepeatMasker: Added (Screen DNA sequence). 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2018-01-13 07:13:05 +07:00
Petar Petrov 7e06cba42f academic/zotero: Updated for version 5.0.33. 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2018-01-13 07:13:05 +07:00
Petar Petrov 2f599eb75d academic/ugene: Updated for version 1.29.0. 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2018-01-13 07:13:05 +07:00
Petar Petrov 79d1caba14 academic/trfind: Added (Tandem repeats finder: analyze DNA seqs). 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2018-01-13 07:13:05 +07:00
Petar Petrov 6089571552 academic/snpEff: Updated for version 4.3t. 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2018-01-13 07:13:05 +07:00
Petar Petrov 8a6006c3b9 academic/seaview: Updated for version 4.6.3. 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2018-01-13 07:13:05 +07:00
Petar Petrov f9d110cf94 academic/pamlX: Updated for paml-4.9g compatibility. 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2018-01-13 07:13:04 +07:00
Petar Petrov 354557ac88 academic/paml: Updated for version 4.9g. 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2018-01-13 07:13:04 +07:00
Petar Petrov f41588ed6f academic/pal2nal: Updated for version 14.1. 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2018-01-13 07:13:04 +07:00
Petar Petrov 3f6353744d academic/ncbi-rmblastn: Added (NCBI RMBlast). 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2018-01-13 07:13:04 +07:00
Petar Petrov 2ae24aff5e academic/ncbi-blast-plus: Updated for version 2.7.1. 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2018-01-13 07:13:04 +07:00
Petar Petrov 463fe4e265 academic/mafft: Updated for version 7.313. 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2018-01-13 07:13:04 +07:00
Petar Petrov 87d9f1406a academic/hyphy: Updated for version 2.3.8. 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2018-01-13 07:13:04 +07:00
Petar Petrov 7abde72faf academic/bwa: Updated for version 0.7.17. 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2018-01-13 07:13:04 +07:00
Petar Petrov 413b996543 academic/bedtools: Updated for version 2.27.1. 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2018-01-13 07:13:04 +07:00
Felix Pfeifer a9f3b28d15 academic/pcb: Updated for version 4.0.2. 
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
 2018-01-10 23:55:51 +07:00
Christoph Willing cdc632e77b academic/suitesparse: Updated for version 5.1.2 
Signed-off-by: Christoph Willing <chris.willing@linux.com>
 2018-01-10 23:55:45 +07:00
melikamp 3f730ff237 academic/R: Updated for version 3.4.3. 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2018-01-06 06:55:32 +07:00
ArTourter 1132540a34 academic/units: Updated for version 2.16. 
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
 2018-01-06 06:41:44 +07:00
Willy Sudiarto Raharjo 5c8d4ebfd6 academic/gcompris: Updated for version 17.05. 
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
 2017-12-27 18:10:01 -06:00
Kyle Guinn c5f2951803 academic/spqr: BUILD bump for SuiteSparse 5.1.0. 
Signed-off-by: Kyle Guinn <elyk03@gmail.com>
 2017-12-21 08:19:41 +07:00
Kyle Guinn 6506c253c7 academic/umfpack: BUILD bump for SuiteSparse 5.1.0. 
Signed-off-by: Kyle Guinn <elyk03@gmail.com>
 2017-12-21 08:19:41 +07:00
Kyle Guinn aab964c19f academic/klu: BUILD bump for SuiteSparse 5.1.0. 
Signed-off-by: Kyle Guinn <elyk03@gmail.com>
 2017-12-21 08:19:40 +07:00
Kyle Guinn 41ff6d6758 academic/cholmod: BUILD bump for SuiteSparse 5.1.0. 
Signed-off-by: Kyle Guinn <elyk03@gmail.com>
 2017-12-21 08:19:40 +07:00
Kyle Guinn 7347836563 academic/rbio: BUILD bump for SuiteSparse 5.1.0. 
Signed-off-by: Kyle Guinn <elyk03@gmail.com>
 2017-12-21 08:19:40 +07:00
Kyle Guinn 5c284f692c academic/btf: BUILD bump for SuiteSparse 5.1.0. 
Signed-off-by: Kyle Guinn <elyk03@gmail.com>
 2017-12-21 08:19:40 +07:00
Kyle Guinn fd01c9581a academic/ldl: BUILD bump for SuiteSparse 5.1.0. 
Signed-off-by: Kyle Guinn <elyk03@gmail.com>
 2017-12-21 08:19:40 +07:00
Kyle Guinn 8ddb5bba15 academic/cxsparse: Updated for version 3.2.0. 
Signed-off-by: Kyle Guinn <elyk03@gmail.com>
 2017-12-21 08:19:40 +07:00
Kyle Guinn 6adc705ec1 academic/csparse: Updated for version 3.2.0. 
Signed-off-by: Kyle Guinn <elyk03@gmail.com>
 2017-12-21 08:19:40 +07:00
Kyle Guinn 59d4710721 academic/ccolamd: BUILD bump for SuiteSparse 5.1.0. 
Signed-off-by: Kyle Guinn <elyk03@gmail.com>
 2017-12-21 08:19:40 +07:00
Kyle Guinn 76b3a6a05b academic/colamd: BUILD bump for SuiteSparse 5.1.0. 
Signed-off-by: Kyle Guinn <elyk03@gmail.com>
 2017-12-21 08:19:40 +07:00
Kyle Guinn b8212c9757 academic/camd: BUILD bump for SuiteSparse 5.1.0. 
Signed-off-by: Kyle Guinn <elyk03@gmail.com>
 2017-12-21 08:19:40 +07:00
Kyle Guinn 4148ee3bc6 academic/amd: BUILD bump for SuiteSparse 5.1.0. 
Signed-off-by: Kyle Guinn <elyk03@gmail.com>
 2017-12-21 08:19:40 +07:00
Kyle Guinn 2fb2a16182 academic/suitesparseconfig: Updated for version 5.1.0. 
Signed-off-by: Kyle Guinn <elyk03@gmail.com>
 2017-12-21 08:19:39 +07:00
Kyle Guinn eda4f256bb academic/lapacke: Updated for version 3.8.0. 
Signed-off-by: Kyle Guinn <elyk03@gmail.com>
 2017-12-21 08:19:39 +07:00
Kyle Guinn 53e9010822 academic/cblas: Updated for version 3.8.0. 
Signed-off-by: Kyle Guinn <elyk03@gmail.com>
 2017-12-21 08:19:39 +07:00
Lorenzo Trevisan 2f57a1d6a5 academic/dakota: Updated for version 6.7. 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2017-12-16 07:32:03 +07:00
R. S. Ananda Murthy d5db121e73 academic/ngspice: Fixed md5sums. 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2017-12-16 07:32:03 +07:00
Willy Sudiarto Raharjo cae61da074 academic/geneconv: Switch to https. 
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
 2017-12-13 16:05:14 +07:00
Christoph Willing 2cffe54350 academic/suitesparse: Updated for version 5.1.0 
Signed-off-by: Christoph Willing <chris.willing@linux.com>
 2017-12-09 08:27:46 +07:00
Alexander Verbovetsky c96efa2dbf academic/cadabra2: Updated for version 2.1.7. 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2017-12-02 06:31:04 +07:00
Fellype do Nascimento b285d0650e academic/scidavis: Patched to fix crashes. 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2017-12-02 06:31:04 +07:00
R. S. Ananda Murthy a3253b3493 academic/gaw3: Updated for version 20170716. 
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
 2017-12-02 06:30:53 +07:00
R. S. Ananda Murthy ba3a2f5842 academic/ngspice: Updated for version 27. 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2017-11-23 17:27:05 +00:00
rob van nues da57b65b95 academic/pyCRAC: Updated for version 1.2.4.0. 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2017-11-20 17:59:07 +07:00
R.S.Ananda Murthy cca112722f academic/fet: Updated for version 5.34.0. 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2017-11-20 17:59:05 +07:00
Willy Sudiarto Raharjo e02d6858bd academic/cadabra2: Switch to https. 
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
 2017-11-20 17:42:14 +07:00
Alexander Verbovetsky 1de52fa1fa academic/reduce-algebra: Updated for version 20171112svn4264. 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2017-11-18 12:40:26 +07:00
Fellype do Nascimento 0665ce0fa6 academic/veusz: Updated for version 2.1.1. 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2017-11-18 12:40:26 +07:00
Pedro Mendes 3f886c6d05 academic/copasi: Updated for version 4.22.170. 
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
 2017-11-17 01:25:54 +07:00
Alexander Verbovetsky 8c5f20ab59 academic/cadabra2: Added (field-theory motivated computer algebra). 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2017-11-04 23:42:07 +00:00
Andrew Clemons d64fb03880 academic/paml: Update DOWNLOAD url. 
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
 2017-11-04 07:17:46 +07:00
Andrew Clemons 517db4b734 academic/itex2mml: Remove obsolete patch. 
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
 2017-11-04 07:17:46 +07:00
rob van nues 15fbb17347 academic/pyCRAC: Added (Next generation sequencing analysis). 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2017-11-03 23:18:37 +00:00
Fellype do Nascimento 5926dc0a44 academic/veusz: Updated for version 2.1. 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2017-11-01 20:45:12 +00:00
Fellype do Nascimento b3b9170cf6 academic/scidavis: Updated for version 1.22. 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2017-10-28 07:07:03 +07:00
R.S.Ananda Murthy 64c447149b academic/fet: Updated for version 5.33.3. 
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
 2017-10-28 05:58:28 +07:00
Willy Sudiarto Raharjo 094806981f academic/exonerate: Switch to https. 
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
 2017-10-26 09:25:14 +07:00
Tim Dickson d7ebd09fcd academic/xiphos: Updated for version 4.0.7. 
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
 2017-10-21 06:58:09 +07:00
Larry Hajali 79388a931d academic/qalculate-gtk: Updated for version 2.1.0 
Signed-off-by: Larry Hajali <larryhaja[at]gmail[dot]com>
 2017-10-14 14:48:50 +01:00
Larry Hajali 20b93b03f2 academic/libqalculate: Updated for version 2.1.0 
Signed-off-by: Larry Hajali <larryhaja[at]gmail[dot]com>
 2017-10-14 14:48:50 +01:00
Willy Sudiarto Raharjo 7734dee877 academic/PhyTime: Removed (Included in PhyML). 
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
 2017-10-11 21:55:00 +07:00
Petar Petrov 54bdcd5c73 academic/meme-suite: Added (Motif based sequence analysis tools). 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2017-10-11 06:19:52 +07:00
Petar Petrov cef175ce57 academic/hyphy: Added (Hypothesis Testing using Phylogenies). 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2017-10-11 06:19:52 +07:00
Petar Petrov 7f80fb2d08 academic/pal2nal: Added (Create a codon-based DNA alignment). 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2017-10-11 06:19:51 +07:00
Petar Petrov 24ed42750b academic/zotero: Updated for version 5.0.21. 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2017-10-11 06:19:51 +07:00
Petar Petrov 8c6b10784f academic/wehi-weasel: Updated for version 3.4.2.17. 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2017-10-11 06:19:51 +07:00
Petar Petrov ba3f47960d academic/vcftools: Updated for version 0.1.15. 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2017-10-11 06:19:50 +07:00
Petar Petrov 039d784312 academic/ugene: Updated for version 1.27.0. 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2017-10-11 06:19:50 +07:00
Petar Petrov f185cf17de academic/spades: Updated for version 3.11.1. 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2017-10-11 06:19:50 +07:00
Petar Petrov 6e9bd7ab71 academic/snpEff: Updated for version 4.3r. 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2017-10-11 06:19:50 +07:00
Petar Petrov f3357334f4 academic/prank-msa: Updated for version 170427. 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2017-10-11 06:19:49 +07:00
Petar Petrov 1c218cb8d4 academic/megacc: Updated for version 7.0.26_1. 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2017-10-11 06:19:49 +07:00
Petar Petrov c81add24ac academic/finchtv: Updated for version 1.3.1. 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2017-10-11 06:19:49 +07:00
Petar Petrov b4424ccb5b academic/exonerate: Updated for version 2.4.0. 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2017-10-11 06:19:49 +07:00
Petar Petrov 150b26a1a5 academic/cutadapt: Updated for version 1.14. 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2017-10-11 06:19:48 +07:00
Petar Petrov 4b7bda6cbf academic/cistrome-mdseqpos: Updated for v. git_20170829_6334683. 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2017-10-11 06:19:48 +07:00
Petar Petrov 57bed2592c academic/cistrome-extra: Updated for version git_20170829_6334683. 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2017-10-11 06:19:48 +07:00
Petar Petrov 473a25f557 academic/bwa: Updated for version 0.7.16a. 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2017-10-11 06:19:47 +07:00
Petar Petrov 1ff2bcdd6c academic/bppsuite: Updated for version 2.3.1. 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2017-10-11 06:19:47 +07:00
Petar Petrov 67a3a5df38 academic/bpp-popgen: Updated for version 2.3.1. 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2017-10-11 06:19:47 +07:00
Petar Petrov 008d1fdfda academic/bpp-phyl-omics: Updated for version 2.3.1. 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2017-10-11 06:19:47 +07:00
Petar Petrov 44f0cd13bc academic/bpp-seq-omics: Updated for version 2.3.1. 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2017-10-11 06:19:46 +07:00
Petar Petrov 004d9c7c43 academic/bpp-phyl: Updated for version 2.3.1. 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2017-10-11 06:19:46 +07:00
Petar Petrov c7c622ecf0 academic/bpp-seq: Updated for version 2.3.1. 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2017-10-11 06:19:46 +07:00
Petar Petrov bde72a38fd academic/bpp-core: Updated for version 2.3.1. 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2017-10-11 06:19:46 +07:00
Petar Petrov 6e040246c0 academic/archaeopteryx: Updated for version 0.9920b. 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2017-10-11 06:19:45 +07:00
Petar Petrov 0a3c565536 academic/PhyML: Updated for version 3.3.20170530. 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2017-10-11 06:19:45 +07:00
Matteo Bernardini 24d3216269 academic/dakota: Install the doinst.sh file. 
Signed-off-by: Matteo Bernardini <ponce@slackbuilds.org>
 2017-10-11 06:19:42 +07:00
Petar Petrov 8deab6e334 academic/FCSalyzer: Updated for version 0.9.14_alpha. 
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
 2017-10-11 06:19:32 +07:00
Willy Sudiarto Raharjo c9f9dbf657 academic/mafft: Switch to https. 
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
 2017-10-07 07:01:54 +07:00
Willy Sudiarto Raharjo c5bb39679c academic/Mnemosyne: Fix whitespaces. 
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
 2017-10-07 07:01:53 +07:00
Christoph Willing 7814cca243 academic/suitesparse: Updated for version 4.5.6 
Signed-off-by: Christoph Willing <chris.willing@linux.com>
 2017-10-07 07:01:45 +07:00
Benjamin Trigona-Harany 705695777a academic/armadillo: Updated for version 8.100.0. 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2017-10-07 00:34:52 +01:00
Tim Dickson c0ac6d14a8 academic/bibletime: Updated for version 2.11.1. 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2017-10-04 10:57:52 +01:00
R.S.Ananda Murthy 24ac1bab97 academic/fet: Updated for version 5.33.1. 
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
 2017-09-30 07:19:17 +07:00
David Spencer ceb24dc9b7 academic/OpenFOAM: Fix build. 
Thanks to Lorenzo Trevisan :)

Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2017-09-30 00:42:08 +01:00
Fellype do Nascimento 04de149254 academic/veusz: Updated for version 2.0.1. 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2017-09-30 00:42:06 +01:00
David Spencer f8e25717eb academic/bppsuite: Fix new github md5sum. 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2017-09-24 19:46:56 +01:00
R. S. Ananda Murthy a8b73487f5 academic/Mnemosyne: Updated for version 2.5. 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2017-09-24 10:27:53 +01:00
Lorenzo Trevisan 2b3ebf4023 academic/dakota: Added (optimization toolkit). 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2017-09-23 16:12:38 +01:00
Lorenzo Trevisan 416e9620f6 academic/OpenFOAM: Added (computational fluid dynamics). 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2017-09-23 14:20:17 +01:00
Rob van Nues 14c13dd569 academic/novocraft: Added (map short reads onto reference genome). 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2017-09-16 07:15:01 +07:00
Rob van Nues 87f60da8de academic/flexbar: Added (barcode and adapter removal). 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2017-09-16 07:15:01 +07:00
Rob van Nues 6b9af1ae13 academic/pysam: Added (read/write genomic data sets). 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2017-09-16 07:15:00 +07:00
Fellype do Nascimento e411e951df academic/veusz: Updated for version 1.27. 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2017-09-04 23:10:58 +01:00
Larry Hajali 4c1ac05c56 academic/qalculate-gtk: Updated for version 2.0.0 
Signed-off-by: Larry Hajali <larryhaja[at]gmail[dot]com>
 2017-09-02 10:22:28 +01:00
Larry Hajali e97c03f5d3 academic/libqalculate: Updated for version 2.0.0 
Signed-off-by: Larry Hajali <larryhaja[at]gmail[dot]com>
 2017-09-02 10:22:28 +01:00
R. S. Ananda Murthy 4bf1cf743d academic/gspiceui: Updated for version 1.1.00. 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2017-09-02 10:19:45 +01:00
Willy Sudiarto Raharjo 5a3cd3a4ce academic/sigrok-cli: Switch to https. 
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
 2017-08-26 09:30:34 +07:00
Willy Sudiarto Raharjo 7aca9cab72 academic/pulseview: Switch to https. 
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
 2017-08-26 09:29:14 +07:00
Willy Sudiarto Raharjo c8fc9f9d49 academic/easy_spice: Use tgz. 
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
 2017-08-26 07:20:03 +07:00
Tim Dickson d319567ab8 academic/xiphos: Updated for version 4.0.6. 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2017-08-26 07:19:40 +07:00
Alan Alberghini 18d408de57 academic/stellarium: Updated for version 0.16.0. 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2017-08-26 07:19:30 +07:00
R.S.Ananda Murthy 71293a049a academic/fet: Updated for version 5.32.3. 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2017-08-19 07:10:41 +07:00
Daniil Bratashov 968d77e6cd academic/gwyddion: Updated for version 2.49. 
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
 2017-08-19 07:10:31 +07:00
Willy Sudiarto Raharjo 7246684d08 academic/treeview: Updated for version 0.5.1. 
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
 2017-08-13 09:00:13 +07:00
Willy Sudiarto Raharjo 4dac29819e academic/gp2fasta: Update HOMEPAGE and DOWNLOAD urls. 
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
 2017-08-12 06:58:19 +07:00
Fellype do Nascimento 027eebfddc academic/scidavis: Updated for version 1.21. 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2017-08-12 06:57:56 +07:00
Edward W. Koenig d37edccf84 academic/sage: New maintainer. 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2017-08-12 06:57:31 +07:00
Edward W. Koenig 9e1102bd90 academic/scilab: Updated for version 6.0.0 + new maintainer. 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2017-08-12 06:57:30 +07:00
Pedro Mendes e6f64ac326 academic/copasi: Updated for version 4.20.158. 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2017-08-05 07:07:29 +07:00
Larry Hajali dbca1458b4 academic/qalculate-gtk: Updated for version 1.0.0 
Signed-off-by: Larry Hajali <larryhaja[at]gmail[dot]com>
 2017-07-29 17:50:43 +07:00
Larry Hajali 006b5eecf7 academic/libqalculate: Updated for version 1.0.0 
Signed-off-by: Larry Hajali <larryhaja[at]gmail[dot]com>
 2017-07-29 17:50:43 +07:00
Matteo Bernardini 3297a4ce56 academic/tophat: Force a single make job. 
Signed-off-by: Matteo Bernardini <ponce@slackbuilds.org>
 2017-07-29 17:50:23 +07:00
Matteo Bernardini a6a1f2bd90 academic/reduce-algebra: Force a single make job. 
Signed-off-by: Matteo Bernardini <ponce@slackbuilds.org>
 2017-07-29 17:50:23 +07:00
Matteo Bernardini 973a6b4a38 academic/gretl: Updated for version 2017c. 
Moved the documentation tarballs to self-hosted,
they were unversioned and replaced

Signed-off-by: Matteo Bernardini <ponce@slackbuilds.org>
 2017-07-29 17:50:22 +07:00
Matteo Bernardini 2c684c9c1d academic/free42: Updated for version 2.0.4. 
Needed because the tarball was always replaced

Signed-off-by: Matteo Bernardini <ponce@slackbuilds.org>
 2017-07-29 17:50:21 +07:00
Willy Sudiarto Raharjo 29eedf307b academic/sage: Updated for version 8.0. 
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
 2017-07-26 18:29:06 +07:00
R.S.Ananda Murthy 8abc93d09c academic/fet: Updated for version 5.31.9. 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2017-07-22 06:56:16 +07:00
Fellype do Nascimento 13e2dc3cf6 academic/scidavis: Updated for version 1.19. 
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
 2017-07-22 06:55:39 +07:00
Alexander Verbovetsky a5d1002442 academic/reduce-algebra: Updated for version 20170712svn4102. 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2017-07-15 07:33:40 +07:00
R.S.Ananda Murthy a0bd6ce85c academic/fet: Updated for version 5.31.8. 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2017-07-15 07:33:40 +07:00
Sebastien BALLET 2bc5d5d761 academic/cistrome-conductGO: Fix ownership. 
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
 2017-07-15 07:28:59 +07:00
Sebastien BALLET 8a9b1f238f academic/tilem2: Fix ownership. 
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
 2017-07-15 07:28:25 +07:00
Sebastien BALLET 4131bc4e90 academic/knime: Fix ownership. 
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
 2017-07-15 07:27:43 +07:00
Sebastien BALLET da03547488 academic/calcoo: Fix ownership. 
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
 2017-07-15 07:27:22 +07:00
Sebastien BALLET 68a6ea0743 academic/engauge: Fix ownership. 
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
 2017-07-15 07:27:02 +07:00
David Spencer 59e559b6a8 academic/siril: Fix doc ownership, use our cflags. 
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
 2017-07-12 16:39:17 +01:00
Kyle Guinn f7a230b7fa academic/spqr: Updated for version 2.0.8. 
Signed-off-by: Kyle Guinn <elyk03@gmail.com>
 2017-07-08 07:11:37 +07:00
Kyle Guinn 791c6a8c34 academic/umfpack: BUILD bump for SuiteSparse 4.5.5. 
Signed-off-by: Kyle Guinn <elyk03@gmail.com>
 2017-07-08 07:11:37 +07:00
Kyle Guinn db0d30e8db academic/klu: BUILD bump for SuiteSparse 4.5.5. 
Signed-off-by: Kyle Guinn <elyk03@gmail.com>
 2017-07-08 07:11:37 +07:00
Kyle Guinn 4f8e2f21f7 academic/cholmod: BUILD bump for SuiteSparse 4.5.5. 
Signed-off-by: Kyle Guinn <elyk03@gmail.com>
 2017-07-08 07:11:37 +07:00
Kyle Guinn af62d500e0 academic/rbio: BUILD bump for SuiteSparse 4.5.5. 
Signed-off-by: Kyle Guinn <elyk03@gmail.com>
 2017-07-08 07:11:36 +07:00
Kyle Guinn d887bfdd1b academic/btf: BUILD bump for SuiteSparse 4.5.5. 
Signed-off-by: Kyle Guinn <elyk03@gmail.com>
 2017-07-08 07:11:36 +07:00
Kyle Guinn e4ef2b80fd academic/ldl: BUILD bump for SuiteSparse 4.5.5. 
Signed-off-by: Kyle Guinn <elyk03@gmail.com>
 2017-07-08 07:11:36 +07:00
Kyle Guinn 40fb0c3be6 academic/cxsparse: BUILD bump for SuiteSparse 4.5.5. 
Signed-off-by: Kyle Guinn <elyk03@gmail.com>
 2017-07-08 07:11:36 +07:00
Kyle Guinn 571c88905f academic/csparse: BUILD bump for SuiteSparse 4.5.5. 
Signed-off-by: Kyle Guinn <elyk03@gmail.com>
 2017-07-08 07:11:35 +07:00
Kyle Guinn 93a204f09a academic/ccolamd: BUILD bump for SuiteSparse 4.5.5. 
Signed-off-by: Kyle Guinn <elyk03@gmail.com>
 2017-07-08 07:11:35 +07:00