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academic/bowtie2: Updated for version 2.4.2. 

Signed-off-by: Dave Woodfall <dave@slackbuilds.org>

Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
This commit is contained in:
Rob van Nues 2020-10-09 02:23:23 +01:00 committed by Willy Sudiarto Raharjo
parent 0074529fa7
commit eb54dd298a
No known key found for this signature in database
GPG Key ID: 3F617144D7238786
2 changed files with 5 additions and 7 deletions
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6
academic/bowtie2/bowtie2.SlackBuild
View File

@ -25,7 +25,7 @@
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
PRGNAM=bowtie2
VERSION=${VERSION:-2.4.1}
VERSION=${VERSION:-2.4.2}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
@ -72,8 +72,6 @@ find -L . \
-o -perm 440 -o -perm 400 \) -exec chmod 644 {} \;
#Use our FLAGS
#sed -i "/RELEASE_FLAGS/s/=/+=/" Makefile
RELEASE_FLAGS+="$SLKCFLAGS" \
make
@ -102,7 +100,7 @@ find $PKG -print0 | xargs -0 file | grep -e "executable" -e "shared object" | gr
mkdir -p $PKG/usr/doc/$PRGNAM-$VERSION
cp -a \
AUTHORS LICENSE MANUAL NEWS TUTORIAL VERSION doc \
AUTHORS LICENSE MANUAL NEWS TUTORIAL BOWTIE2_VERSION doc \
$PKG/usr/doc/$PRGNAM-$VERSION
cat $CWD/$PRGNAM.SlackBuild > $PKG/usr/doc/$PRGNAM-$VERSION/$PRGNAM.SlackBuild

6
academic/bowtie2/bowtie2.info
View File

@ -1,8 +1,8 @@
PRGNAM="bowtie2"
VERSION="2.4.1"
VERSION="2.4.2"
HOMEPAGE="https://github.com/BenLangmead/bowtie2/releases"
DOWNLOAD="https://github.com/BenLangmead/bowtie2/archive/v2.4.1/bowtie2-2.4.1.tar.gz"
MD5SUM="5938482fab363c6356f9662cce38f99c"
DOWNLOAD="https://github.com/BenLangmead/bowtie2/archive/v2.4.2/bowtie2-2.4.2.tar.gz"
MD5SUM="d5f8674aed8bdbf6b96bd07f3df528ee"
DOWNLOAD_x86_64=""
MD5SUM_x86_64=""
REQUIRES="tbb python3"