hollalinux
/
slackbuilds
mirror of https://github.com/SlackBuildsOrg/slackbuilds.git
1
0
Fork 0
Code Issues Projects Releases Wiki Activity

academic/seaview: Updated for version 4.6.1.2. 

Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
This commit is contained in:
Petar Petrov 2016-11-26 23:15:57 +00:00 committed by Willy Sudiarto Raharjo
parent a356bf0af4
commit a4759dfac8
No known key found for this signature in database
GPG Key ID: 887B8374D7333381
4 changed files with 9 additions and 9 deletions
Show Stats Download Patch File Download Diff File Expand all files Collapse all files

2
academic/seaview/README
View File

@ -16,7 +16,7 @@ sequence alignment and molecular phylogeny. Important features are:
a) parsimony, using PHYLIP's dnapars/protpars algorithm
b) distance, with NJ or BioNJ algorithms on a variety of
evolutionary distances,
c) maximum likelihood, driving program PhyML 3.1.
c) maximum likelihood, driving program PhyML
5) SeaView prints and draws phylogenetic trees on screen, SVG, PDF or
PostScript files.

8
academic/seaview/seaview.SlackBuild
View File

@ -26,13 +26,13 @@
# Thanks to developer Dr. Manolo Gouy for all his help.
PRGNAM=seaview
VERSION=${VERSION:-4.6}
VERSION=${VERSION:-4.6.1.2}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
if [ -z "$ARCH" ]; then
case "$( uname -m )" in
i?86) ARCH=i486 ;;
i?86) ARCH=i586 ;;
arm*) ARCH=arm ;;
*) ARCH=$( uname -m ) ;;
esac
@ -43,8 +43,8 @@ TMP=${TMP:-/tmp/SBo}
PKG=$TMP/package-$PRGNAM
OUTPUT=${OUTPUT:-/tmp}
if [ "$ARCH" = "i486" ]; then
SLKCFLAGS="-O2 -march=i486 -mtune=i686"
if [ "$ARCH" = "i586" ]; then
SLKCFLAGS="-O2 -march=i586 -mtune=i686"
LIBDIRSUFFIX=""
elif [ "$ARCH" = "i686" ]; then
SLKCFLAGS="-O2 -march=i686 -mtune=i686"

6
academic/seaview/seaview.info
View File

@ -1,8 +1,8 @@
PRGNAM="seaview"
VERSION="4.6"
VERSION="4.6.1.2"
HOMEPAGE="http://doua.prabi.fr/software/seaview"
DOWNLOAD="ftp://pbil.univ-lyon1.fr/pub/mol_phylogeny/seaview/archive/seaview_4.6.tar.gz"
MD5SUM="e031093389bc7973625993817a1dcb73"
DOWNLOAD="ftp://pbil.univ-lyon1.fr/pub/mol_phylogeny/seaview/archive/seaview_4.6.1.2.tar.gz"
MD5SUM="4beb86e6faef2137c2efc8ec6e4d83b8"
DOWNLOAD_x86_64=""
MD5SUM_x86_64=""
REQUIRES="fltk PDFlib-Lite Gblocks PhyML clustalo muscle"

2
academic/seaview/slack-desc
View File

@ -11,7 +11,7 @@ seaview:
seaview: SeaView is a multiplatform, graphical user interface for multiple
seaview: sequence alignment and molecular phylogeny.
seaview:
seaview: References: /usr/doc/seaview-4.6/References
seaview: References: /usr/doc/seaview-4.6.1.2/References
seaview: Home: http://doua.prabi.fr/software/seaview
seaview:
seaview: