development/chameleon: Added (solve dense linear equations)
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
This commit is contained in:
William PC
Willy Sudiarto Raharjo
parent
7c937029e4
commit
9fca7fe864
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Chameleon is a framework written in C which provides routines to
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solve dense general systems of linear equations, symmetric positive
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definite systems of linear equations and linear least squares
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problems, using LU, Cholesky, QR and LQ factorizations. Real
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arithmetic and complex arithmetic are supported in both single
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precision and double precision.
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Chameleon is based on the PLASMA source code but is not limited
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to shared-memory environment and can exploit multiple GPUs.
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Chameleon is interfaced in a generic way with StarPU, PaRSEC,
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QUARK, OpenMP runtime systems. This feature allows to analyze in
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a unified framework how sequential task-based algorithms behave
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regarding different runtime systems implementations. Using Chameleon
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with StarPU or PaRSEC runtime systems allows to exploit GPUs through
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kernels provided by cuBLAS and clusters of interconnected nodes with
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distributed memory (using MPI).
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The default scheduler is set to OpenMP, if you want to use the StarPU
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you should set the environment variable STARPU=yes and install StarPU.
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For enabling MPI set the environment variable MPI=yes, this require
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a MPI implementation (openmpi or mpich).
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#!/bin/bash
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# Slackware build script for chameleon
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# Copyright 2022 William PC - Seattle, USA
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# All rights reserved.
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#
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# Redistribution and use of this script, with or without modification, is
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# permitted provided that the following conditions are met:
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#
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# 1. Redistributions of this script must retain the above copyright
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# notice, this list of conditions and the following disclaimer.
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#
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# THIS SOFTWARE IS PROVIDED BY THE AUTHOR "AS IS" AND ANY EXPRESS OR IMPLIED
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# WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF
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# MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO
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# EVENT SHALL THE AUTHOR BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL,
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# SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
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# PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS;
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# OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY,
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# WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR
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# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
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# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
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cd $(dirname $0) ; CWD=$(pwd)
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PRGNAM=chameleon
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VERSION=${VERSION:-1.1.0}
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BUILD=${BUILD:-1}
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TAG=${TAG:-_SBo}
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PKGTYPE=${PKGTYPE:-tgz}
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if [ -z "$ARCH" ]; then
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case "$( uname -m )" in
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i?86) ARCH=i586 ;;
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arm*) ARCH=arm ;;
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*) ARCH=$( uname -m ) ;;
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esac
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fi
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# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
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# the name of the created package would be, and then exit. This information
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# could be useful to other scripts.
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if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
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echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
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exit 0
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fi
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TMP=${TMP:-/tmp/SBo}
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PKG=$TMP/package-$PRGNAM
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OUTPUT=${OUTPUT:-/tmp}
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if [ "$ARCH" = "i586" ]; then
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SLKCFLAGS="-O2 -march=i586 -mtune=i686"
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LIBDIRSUFFIX=""
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elif [ "$ARCH" = "i686" ]; then
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SLKCFLAGS="-O2 -march=i686 -mtune=i686"
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LIBDIRSUFFIX=""
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elif [ "$ARCH" = "x86_64" ]; then
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SLKCFLAGS="-O2 -fPIC"
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LIBDIRSUFFIX="64"
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else
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SLKCFLAGS="-O2"
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LIBDIRSUFFIX=""
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fi
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set -e
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rm -rf $PKG
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mkdir -p $TMP $PKG $OUTPUT
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cd $TMP
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rm -rf $PRGNAM-$VERSION
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tar xvf $CWD/$PRGNAM-$VERSION.tar.gz
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cd $PRGNAM-$VERSION
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chown -R root:root .
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find -L . \
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\( -perm 777 -o -perm 775 -o -perm 750 -o -perm 711 -o -perm 555 \
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-o -perm 511 \) -exec chmod 755 {} \; -o \
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\( -perm 666 -o -perm 664 -o -perm 640 -o -perm 600 -o -perm 444 \
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-o -perm 440 -o -perm 400 \) -exec chmod 644 {} \;
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if [ "${STARPU:-no}" == "yes" ]; then
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OPT_BUILD="-DCHAMELEON_SCHED=STARPU"
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else
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OPT_BUILD="-DCHAMELEON_SCHED=OPENMP"
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fi
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if [ "${MPI:-no}" == "yes" ]; then
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OPT_BUILD="$OPT_BUILD -DCHAMELEON_USE_MPI=ON"
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fi
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###########
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# runtime fixes
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###########
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# fix for the pkgconfig files and "hqr_env.sh" to use
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# the right library path
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sed -i 's#/lib#/lib'${LIBDIRSUFFIX}'#' \
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lib/pkgconfig/{chameleon,coreblas,cudablas}.pc.in \
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hqr/lib/pkgconfig/hqr.pc.in hqr/hqr_env.sh.in
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###########
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# installation fixes
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###########
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# fix the installation of some files that was
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# been installed to /usr/bin
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sed -i 's# bin # share/libexec/chameleon #' hqr/testings/CMakeLists.txt
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sed -i 's# DESTINATION bin/chameleon# DESTINATION share/chameleon/examples#' example/lapack_to_chameleon/CMakeLists.txt
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sed -i 's# DESTINATION bin# DESTINATION share/libexec/chameleon#' hqr/cmake_modules/GenHQRPkgConfig.cmake
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# fix lib installation path
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sed -i 's#DESTINATION lib#&'${LIBDIRSUFFIX}'#' \
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runtime/{openmp,starpu,parsec,quark}/CMakeLists.txt \
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compute/CMakeLists.txt \
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{coreblas,cudablas}/compute/CMakeLists.txt \
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hqr/src/CMakeLists.txt
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# fix installation of pkgfiles to lib${LIBDIRSUFFIX}
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sed -i 's#DESTINATION lib#&'${LIBDIRSUFFIX}'#' \
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cmake_modules/GenPkgConfig.cmake \
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hqr/cmake_modules/GenHQRPkgConfig.cmake
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mkdir -p build
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cd build
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cmake \
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-DCMAKE_C_FLAGS:STRING="$SLKCFLAGS" \
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-DCMAKE_CXX_FLAGS:STRING="$SLKCFLAGS" \
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-DCMAKE_INSTALL_PREFIX=/usr \
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-DLIB_INSTALL_DIR=lib${LIBDIRSUFFIX} \
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-DBIN_INSTALL_DIR=libexec/$PRGNAM \
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-DBUILD_SHARED_LIBS=ON \
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$OPT_BUILD \
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-DCMAKE_BUILD_TYPE=Release ..
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make
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make install/strip DESTDIR=$PKG
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cd ..
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# Don't ship .la files:
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rm -f $PKG/{,usr/}lib${LIBDIRSUFFIX}/*.la
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find $PKG -print0 | xargs -0 file | grep -e "executable" -e "shared object" | grep ELF \
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| cut -f 1 -d : | xargs strip --strip-unneeded 2> /dev/null || true
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mkdir -p $PKG/usr/doc/$PRGNAM-$VERSION
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cp -a CONTRIBUTING.org LICENCE.txt \
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$PKG/usr/doc/$PRGNAM-$VERSION
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cat $CWD/$PRGNAM.SlackBuild > $PKG/usr/doc/$PRGNAM-$VERSION/$PRGNAM.SlackBuild
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mkdir -p $PKG/install
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cat $CWD/slack-desc > $PKG/install/slack-desc
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cd $PKG
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/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
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@ -0,0 +1,10 @@
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PRGNAM="chameleon"
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VERSION="1.1.0"
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HOMEPAGE="https://solverstack.gitlabpages.inria.fr/chameleon"
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DOWNLOAD="https://gitlab.inria.fr/solverstack/chameleon/uploads/b299d6037d7636c6be16108c89bc2aab/chameleon-1.1.0.tar.gz"
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MD5SUM="a67a7f472d0e537cb984813e28a933f7"
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DOWNLOAD_x86_64=""
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MD5SUM_x86_64=""
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REQUIRES="blas cblas lapack lapacke"
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MAINTAINER="William PC"
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EMAIL="w_calandrini[at]hotmail[dot]com"
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@ -0,0 +1,19 @@
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# HOW TO EDIT THIS FILE:
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# The "handy ruler" below makes it easier to edit a package description.
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# Line up the first '|' above the ':' following the base package name, and
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# the '|' on the right side marks the last column you can put a character in.
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# You must make exactly 11 lines for the formatting to be correct. It's also
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# customary to leave one space after the ':' except on otherwise blank lines.
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|-----handy-ruler------------------------------------------------------|
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chameleon: chameleon (framework for solving dense linear equations)
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chameleon:
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chameleon:
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chameleon: Chameleon is a framework written in C which provides routines to
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chameleon: solve dense general systems of linear equations, symmetric positive
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chameleon: definite systems of linear equations and linear least squares
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chameleon: problems, using LU, Cholesky, QR and LQ factorizations. Real
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chameleon: arithmetic and complex arithmetic are supported in both single
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chameleon: precision and double precision.
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chameleon:
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chameleon:
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