libraries/trilinos: Added (trilinos project)
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
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The Trilinos Project is an effort to develop algorithms and enabling
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technologies within an object-oriented software framework for the
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solution of large-scale, complex multi-physics engineering and
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scientific problems. A unique design feature of Trilinos is its focus
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on packages.
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The package has two building methods, the default is for a single
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system (without parallelism).
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* The trilinos can also be compiled against individual packages
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(i.e. amd, umfpack and metis) outside of suitesparse.SlackBuild.
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** The suitesparse.SlackBuild, doesn't build metis by default.
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For that you can use the parMETIS.SlackBuild.
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For more details about dependeces the Xyce webpage have a
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list of required depences.
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This package is mantained for building Xyce at 32 and 64 bit
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architectures with serial and parallel mode. Nonetheless, some
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required packages for building Xyce are not compiling at 32-bit
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architectures, this is Kokkos. This SlackBuild includes a workaround
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for compiling Trilinos at 32-bit architectures, disabling some packages
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that depends on Kokkos, i.e. Amesos2 and Stokhos. These packages
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enable optional features in Xyce. However, according to the Xyce
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building instructions the ShyLU package is a requirement for
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Parallel Xyce but also depends on Kokkos.
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* The workaround solution may not allow total funtionality of
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Serial and Parallel Xyce on 32-bit architecture.
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Optional dependences:
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For enable parallelism set PARALLEL=yes. This requires the
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ParMETIS library and a MPI implementation (openmpi or mpich).
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To enable CUDA set CUDA=yes (Additional requirements: CUDA
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SDK and CUSPARSE).
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# HOW TO EDIT THIS FILE:
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# The "handy ruler" below makes it easier to edit a package description.
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# Line up the first '|' above the ':' following the base package name, and
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# the '|' on the right side marks the last column you can put a character in.
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# You must make exactly 11 lines for the formatting to be correct. It's also
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# customary to leave one space after the ':' except on otherwise blank lines.
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|-----handy-ruler------------------------------------------------------|
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trilinos: trilinos (trilinos project)
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trilinos:
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trilinos: The Trilinos Project is an effort to develop algorithms and enabling
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trilinos: technologies within an object-oriented software framework for the
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trilinos: solution of large-scale, complex multi-physics engineering and
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trilinos: scientific problems. A unique design feature of Trilinos is its focus
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trilinos: on packages.
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trilinos:
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trilinos:
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trilinos:
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trilinos:
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#!/bin/bash
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# Slackware build script for trilinos
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# Copyright 2015-2022 William PC - Seattle (USA)
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# All rights reserved.
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#
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# Redistribution and use of this script, with or without modification, is
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# permitted provided that the following conditions are met:
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#
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# 1. Redistributions of this script must retain the above copyright
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# notice, this list of conditions and the following disclaimer.
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#
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# THIS SOFTWARE IS PROVIDED BY THE AUTHOR "AS IS" AND ANY EXPRESS OR IMPLIED
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# WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF
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# MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO
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# EVENT SHALL THE AUTHOR BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL,
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# SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
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# PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS;
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# OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY,
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# WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR
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# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
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# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
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PRGNAM=trilinos
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VERSION=${VERSION:-13.2.0}
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BUILD=${BUILD:-1}
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TAG=${TAG:-_SBo}
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PKGTYPE=${PKGTYPE:-tgz}
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if [ -z "$ARCH" ]; then
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case "$( uname -m )" in
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i?86) ARCH=i586 ;;
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arm*) ARCH=arm ;;
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*) ARCH=$( uname -m ) ;;
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esac
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fi
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# If the variable PRINT_PACKAGE_NAME is set, then this script will report what
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# the name of the created package would be, and then exit. This information
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# could be useful to other scripts.
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if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then
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echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE"
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exit 0
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fi
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CWD=$(pwd)
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TMP=${TMP:-/tmp/SBo}
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PKG=$TMP/package-$PRGNAM
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OUTPUT=${OUTPUT:-/tmp}
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if [ "$ARCH" = "i586" ]; then
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SLKCFLAGS="-O2 -march=i586 -mtune=i686"
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LIBDIRSUFFIX=""
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elif [ "$ARCH" = "i686" ]; then
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SLKCFLAGS="-O2 -march=i686 -mtune=i686"
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LIBDIRSUFFIX=""
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elif [ "$ARCH" = "x86_64" ]; then
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SLKCFLAGS="-O2 -fPIC"
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LIBDIRSUFFIX="64"
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else
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SLKCFLAGS="-O2"
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LIBDIRSUFFIX=""
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fi
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set -e
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rm -rf $PKG
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mkdir -p $TMP $PKG $OUTPUT
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cd $TMP
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rm -rf Trilinos-$PRGNAM-release-13-2-0
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tar xvf $CWD/$PRGNAM-release-13-2-0.tar.gz
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cd Trilinos-$PRGNAM-release-13-2-0
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chown -R root:root .
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find -L . \
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\( -perm 777 -o -perm 775 -o -perm 750 -o -perm 711 -o -perm 555 \
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-o -perm 511 \) -exec chmod 755 {} \; -o \
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\( -perm 666 -o -perm 664 -o -perm 640 -o -perm 600 -o -perm 444 \
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-o -perm 440 -o -perm 400 \) -exec chmod 644 {} \;
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# Use CUDA SDK and CUSPARSE.
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if [ "${CUDA:-no}" == "yes" ]; then
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OPT_DEPS="$OPT_DEPS -DTPL_ENABLE_CUDA -DTPL_ENABLE_CUSPARSE"
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fi
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if [ "${EXAMPLES:-yes}" == "no" ]; then
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OPT_DEPS="$OPT_DEPS -DTrilinos_ENABLE_EXAMPLES=OFF"
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fi
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CFGCOMMON="
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-DCMAKE_MAKE_PROGRAM=make \
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-DTPL_ENABLE_BLAS=ON \
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-DTPL_ENABLE_LAPACK=ON \
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-DTrilinos_ENABLE_NOX=ON \
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-DNOX_ENABLE_LOCA=ON \
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-DTrilinos_ENABLE_EpetraExt=ON \
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-DEpetraExt_BUILD_BTF=ON \
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-DEpetraExt_BUILD_EXPERIMENTAL=ON \
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-DEpetraExt_BUILD_GRAPH_REORDERINGS=ON \
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-DTrilinos_ENABLE_AztecOO=ON \
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-DTrilinos_ENABLE_Belos=ON \
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-DTrilinos_ENABLE_TrilinosCouplings=ON \
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-DTrilinos_ENABLE_Ifpack=ON \
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-DTrilinos_ENABLE_Isorropia=ON \
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-DTrilinos_ENABLE_Teuchos=ON \
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-DTeuchos_ENABLE_COMPLEX=ON \
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-DTrilinos_ENABLE_Amesos=ON \
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-DAmesos_ENABLE_KLU=ON \
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-DAmesos_ENABLE_UMFPACK=ON \
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-DTrilinos_ENABLE_Sacado=ON \
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-DTrilinos_ENABLE_ALL_OPTIONAL_PACKAGES=OFF \
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-DTPL_ENABLE_AMD=ON \
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-DAMD_LIBRARY_DIRS=/usr/lib${LIBDIRSUFFIX} \
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-DTPL_AMD_INCLUDE_DIRS=/usr/include/suitesparse \
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-DTPL_ENABLE_UMFPACK=ON \
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-DUMFPACK_LIBRARY_DIRS=/usr/lib${LIBDIRSUFFIX} \
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-DTPL_UMFPACK_INCLUDE_DIRS=/usr/include/suitesparse \
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"
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## Workaround Kokkos error in 32-bit
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# these packages gives optional features to Xyce
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if [ "$ARCH" = "x86_64" ]; then
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CFGCOMMON="$CFGCOMMON \
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-DTrilinos_ENABLE_Amesos2=ON \
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-DAmesos2_ENABLE_KLU2=ON \
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-DAmesos2_ENABLE_Basker=ON \
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-DTrilinos_ENABLE_Stokhos=ON \
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-DTrilinos_ENABLE_Kokkos=ON"
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else
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CFGCOMMON="$CFGCOMMON \
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-DTrilinos_ENABLE_Kokkos=OFF"
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fi
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CFGSERIAL="$CFGCOMMON
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-DCMAKE_C_COMPILER=/usr/bin/gcc \
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-DCMAKE_CXX_COMPILER=/usr/bin/g++ \
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-DCMAKE_Fortran_COMPILER=/usr/bin/gfortran"
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CFGPARALLEL="$CFGCOMMON
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-DCMAKE_C_COMPILER=/usr/bin/mpicc \
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-DCMAKE_CXX_COMPILER=/usr/bin/mpic++ \
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-DCMAKE_Fortran_COMPILER=/usr/bin/mpif77 \
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-DTPL_ENABLE_ParMETIS=ON \
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-DParMETIS_LIBRARY_DIRS=/usr/lib${LIBDIRSUFFIX} \
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-DTPL_ParMETIS_INCLUDE_DIRS=/usr/include/parmetis \
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-DTPL_ENABLE_MPI=ON \
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-DTrilinos_ENABLE_Zoltan=ON"
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# ShyLU is required for use in Parallel Xyce
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# however it depends on kokkos that doesn't compile
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# on 32-bit. Yeah, another workaround.
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if [ "$ARCH" = "x86_64" ]; then
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CFGPARALLEL="$CFGPARALLEL \
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-DTrilinos_ENABLE_ShyLU=ON"
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else
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CFGPARALLEL="$CFGPARALLEL \
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-DTrilinos_ENABLE_ShyLU=OFF"
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fi
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CFGTRILINOS=$CFGSERIAL
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BUILDDIR=build-serial
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if [ "${PARALLEL:-no}" == "yes" ]; then
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CFGTRILINOS=$CFGPARALLEL
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BUILDDIR=build-parallel
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#SLKCFLAGS="CC=mpicc CXX=mpic++ F77=mpif77 $SLKCFLAGS"
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fi
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rm -fr $BUILDDIR
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mkdir -p $BUILDDIR
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cd $BUILDDIR
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cmake \
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-DCMAKE_C_FLAGS:STRING="$SLKCFLAGS" \
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-DCMAKE_CXX_FLAGS:STRING="$SLKCFLAGS" \
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-DCMAKE_Fortran_FLAGS:STRING="$SLKCFLAGS" \
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-DCMAKE_INSTALL_PREFIX=/usr \
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-DTrilinos_INSTALL_LIB_DIR=/usr/lib${LIBDIRSUFFIX} \
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-DTrilinos_INSTALL_INCLUDE_DIR=/usr/include \
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$CFGTRILINOS \
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$OPT_DEPS \
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-DBUILD_SHARED_LIBS=ON \
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-DCMAKE_BUILD_TYPE=RELEASE ..
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# check if this still necessary
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for f in $(grep -r -l /usr//usr/lib .); do
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sed -i -e 's:/usr//usr/lib:/usr/lib:g' $f
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done
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make
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ctest
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make install DESTDIR=$PKG
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cd ..
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find $PKG -print0 | xargs -0 file | grep -e "executable" -e "shared object" | grep ELF \
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| cut -f 1 -d : | xargs strip --strip-unneeded 2> /dev/null || true
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find $PKG -name perllocal.pod -o -name ".packlist" -o -name "*.bs" | xargs rm -f || true
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mkdir -p $PKG/usr/doc/$PRGNAM-$VERSION
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cp -a {Copyright.txt,LICENSE,README,RELEASE_NOTES} $PKG/usr/doc/$PRGNAM-$VERSION
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cat $CWD/$PRGNAM.SlackBuild > $PKG/usr/doc/$PRGNAM-$VERSION/$PRGNAM.SlackBuild
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mkdir -p $PKG/install
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cat $CWD/slack-desc > $PKG/install/slack-desc
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cd $PKG
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/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE
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PRGNAM="trilinos"
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VERSION="13.2.0"
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HOMEPAGE="https://github.com/trilinos/Trilinos"
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DOWNLOAD="https://github.com/trilinos/Trilinos/archive/refs/tags/trilinos-release-13-2-0.tar.gz"
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MD5SUM="099680cd3660dba5ec447ddc50a8406c"
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DOWNLOAD_x86_64=""
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MD5SUM_x86_64=""
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REQUIRES="lapack blas suitesparse"
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MAINTAINER="William PC"
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EMAIL="w_calandrini[at]hotmail[dot]com"
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