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academic/umfpack: Updated for version 5.7.8. 

Signed-off-by: Kyle Guinn <elyk03@gmail.com>
This commit is contained in:
Kyle Guinn 2019-01-01 17:45:54 -06:00 committed by Willy Sudiarto Raharjo
parent 7ac407794e
commit 40b7b4d17e
No known key found for this signature in database
GPG Key ID: 887B8374D7333381
3 changed files with 82 additions and 75 deletions
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143
academic/umfpack/patches/autoconfiscate.diff
View File

@ -749,7 +749,7 @@ new file mode 100644
+# Process this file with autoconf to produce a configure script.
+
+AC_PREREQ([2.69])
+AC_INIT([UMFPACK],[5.7.6],[DrTimothyAldenDavis@gmail.com],[umfpack],[http://www.suitesparse.com/])
+AC_INIT([UMFPACK],[5.7.8],[DrTimothyAldenDavis@gmail.com],[umfpack],[http://www.suitesparse.com/])
+AC_CONFIG_SRCDIR([Source/umfpack_solve.c])
+AC_CONFIG_AUX_DIR([build-aux])
+AC_CONFIG_MACRO_DIR([m4])
@ -809,7 +809,7 @@ new file mode 100644
+
+AC_SUBST([UMFPACK_REQUIRES])
+
+PKG_INSTALLDIR
+m4_ifdef([PKG_INSTALLDIR], [PKG_INSTALLDIR], [AC_SUBST([pkgconfigdir], [${libdir}/pkgconfig])])
+AC_CONFIG_FILES([
+ umfpack.pc
+ Makefile
@ -932,11 +932,11 @@ new file mode 100644
+# modified version of the Autoconf Macro, you may extend this special
+# exception to the GPL to apply to your modified version as well.
+
+#serial 15
+#serial 16
+
+AU_ALIAS([ACX_BLAS], [AX_BLAS])
+AC_DEFUN([AX_BLAS], [
+AC_PREREQ(2.50)
+AC_PREREQ([2.55])
+AC_REQUIRE([AC_F77_LIBRARY_LDFLAGS])
+AC_REQUIRE([AC_CANONICAL_HOST])
+ax_blas_ok=no
@ -962,7 +962,7 @@ new file mode 100644
+if test "x$BLAS_LIBS" != x; then
+ save_LIBS="$LIBS"; LIBS="$BLAS_LIBS $LIBS"
+ AC_MSG_CHECKING([for $sgemm in $BLAS_LIBS])
+ AC_TRY_LINK_FUNC($sgemm, [ax_blas_ok=yes], [BLAS_LIBS=""])
+ AC_LINK_IFELSE([AC_LANG_CALL([], [$sgemm])], [ax_blas_ok=yes], [BLAS_LIBS=""])
+ AC_MSG_RESULT($ax_blas_ok)
+ LIBS="$save_LIBS"
+fi
@ -972,7 +972,7 @@ new file mode 100644
+if test $ax_blas_ok = no; then
+ save_LIBS="$LIBS"; LIBS="$LIBS"
+ AC_MSG_CHECKING([if $sgemm is being linked in already])
+ AC_TRY_LINK_FUNC($sgemm, [ax_blas_ok=yes])
+ AC_LINK_IFELSE([AC_LANG_CALL([], [$sgemm])], [ax_blas_ok=yes])
+ AC_MSG_RESULT($ax_blas_ok)
+ LIBS="$save_LIBS"
+fi
@ -1043,7 +1043,7 @@ new file mode 100644
+if test $ax_blas_ok = no; then
+ save_LIBS="$LIBS"; LIBS="-framework vecLib $LIBS"
+ AC_MSG_CHECKING([for $sgemm in -framework vecLib])
+ AC_TRY_LINK_FUNC($sgemm, [ax_blas_ok=yes;BLAS_LIBS="-framework vecLib"])
+ AC_LINK_IFELSE([AC_LANG_CALL([], [$sgemm])], [ax_blas_ok=yes;BLAS_LIBS="-framework vecLib"])
+ AC_MSG_RESULT($ax_blas_ok)
+ LIBS="$save_LIBS"
+fi
@ -1109,7 +1109,7 @@ diff --git a/m4/ax_code_coverage.m4 b/m4/ax_code_coverage.m4
new file mode 100644
--- /dev/null
+++ b/m4/ax_code_coverage.m4
@@ -0,0 +1,264 @@
@@ -0,0 +1,271 @@
+# ===========================================================================
+# https://www.gnu.org/software/autoconf-archive/ax_code_coverage.html
+# ===========================================================================
@ -1187,68 +1187,48 @@ new file mode 100644
+# You should have received a copy of the GNU Lesser General Public License
+# along with this program. If not, see <https://www.gnu.org/licenses/>.
+
+#serial 24
+#serial 27
+
+AC_DEFUN([AX_CODE_COVERAGE],[
+ dnl Check for --enable-code-coverage
+ AC_REQUIRE([AC_PROG_SED])
+
+ # allow to override gcov location
+ AC_ARG_WITH([gcov],
+ [AS_HELP_STRING([--with-gcov[=GCOV]], [use given GCOV for coverage (GCOV=gcov).])],
+ [_AX_CODE_COVERAGE_GCOV_PROG_WITH=$with_gcov],
+ [_AX_CODE_COVERAGE_GCOV_PROG_WITH=gcov])
+
+ AC_MSG_CHECKING([whether to build with code coverage support])
+ AC_ARG_ENABLE([code-coverage],
+ AS_HELP_STRING([--enable-code-coverage],
+ [Whether to enable code coverage support]),,
+ enable_code_coverage=no)
+
+ AM_CONDITIONAL([CODE_COVERAGE_ENABLED], [test x$enable_code_coverage = xyes])
+ AC_SUBST([CODE_COVERAGE_ENABLED], [$enable_code_coverage])
+ AC_MSG_RESULT($enable_code_coverage)
+
+ AS_IF([ test "$enable_code_coverage" = "yes" ], [
+ # check for gcov
+ AC_CHECK_TOOL([GCOV],
+AC_DEFUN([_AX_CODE_COVERAGE_ENABLED],[
+ # check for gcov
+ AC_CHECK_TOOL([GCOV],
+ [$_AX_CODE_COVERAGE_GCOV_PROG_WITH],
+ [:])
+ AS_IF([test "X$GCOV" = "X:"],
+ [AC_MSG_ERROR([gcov is needed to do coverage])])
+ AC_SUBST([GCOV])
+ AS_IF([test "X$GCOV" = "X:"],
+ [AC_MSG_ERROR([gcov is needed to do coverage])])
+ AC_SUBST([GCOV])
+
+ dnl Check if gcc is being used
+ AS_IF([ test "$GCC" = "no" ], [
+ AC_MSG_ERROR([not compiling with gcc, which is required for gcov code coverage])
+ ])
+ dnl Check if gcc is being used
+ AS_IF([ test "$GCC" = "no" ], [
+ AC_MSG_ERROR([not compiling with gcc, which is required for gcov code coverage])
+ ])
+
+ AC_CHECK_PROG([LCOV], [lcov], [lcov])
+ AC_CHECK_PROG([GENHTML], [genhtml], [genhtml])
+ AC_CHECK_PROG([LCOV], [lcov], [lcov])
+ AC_CHECK_PROG([GENHTML], [genhtml], [genhtml])
+
+ AS_IF([ test -z "$LCOV" ], [
+ AC_MSG_ERROR([To enable code coverage reporting you must have lcov installed])
+ ])
+ AS_IF([ test x"$LCOV" = x ], [
+ AC_MSG_ERROR([To enable code coverage reporting you must have lcov installed])
+ ])
+
+ AS_IF([ test -z "$GENHTML" ], [
+ AC_MSG_ERROR([Could not find genhtml from the lcov package])
+ ])
+ AS_IF([ test x"$GENHTML" = x ], [
+ AC_MSG_ERROR([Could not find genhtml from the lcov package])
+ ])
+
+ dnl Build the code coverage flags
+ dnl Define CODE_COVERAGE_LDFLAGS for backwards compatibility
+ CODE_COVERAGE_CPPFLAGS="-DNDEBUG"
+ CODE_COVERAGE_CFLAGS="-O0 -g -fprofile-arcs -ftest-coverage"
+ CODE_COVERAGE_CXXFLAGS="-O0 -g -fprofile-arcs -ftest-coverage"
+ CODE_COVERAGE_LIBS="-lgcov"
+ CODE_COVERAGE_LDFLAGS="$CODE_COVERAGE_LIBS"
+ dnl Build the code coverage flags
+ dnl Define CODE_COVERAGE_LDFLAGS for backwards compatibility
+ CODE_COVERAGE_CPPFLAGS="-DNDEBUG"
+ CODE_COVERAGE_CFLAGS="-O0 -g -fprofile-arcs -ftest-coverage"
+ CODE_COVERAGE_CXXFLAGS="-O0 -g -fprofile-arcs -ftest-coverage"
+ CODE_COVERAGE_LIBS="-lgcov"
+ CODE_COVERAGE_LDFLAGS="$CODE_COVERAGE_LIBS"
+
+ AC_SUBST([CODE_COVERAGE_CPPFLAGS])
+ AC_SUBST([CODE_COVERAGE_CFLAGS])
+ AC_SUBST([CODE_COVERAGE_CXXFLAGS])
+ AC_SUBST([CODE_COVERAGE_LIBS])
+ AC_SUBST([CODE_COVERAGE_LDFLAGS])
+ AC_SUBST([CODE_COVERAGE_CPPFLAGS])
+ AC_SUBST([CODE_COVERAGE_CFLAGS])
+ AC_SUBST([CODE_COVERAGE_CXXFLAGS])
+ AC_SUBST([CODE_COVERAGE_LIBS])
+ AC_SUBST([CODE_COVERAGE_LDFLAGS])
+
+ [CODE_COVERAGE_RULES_CHECK='
+ [CODE_COVERAGE_RULES_CHECK='
+ -$(A''M_V_at)$(MAKE) $(AM_MAKEFLAGS) -k check
+ $(A''M_V_at)$(MAKE) $(AM_MAKEFLAGS) code-coverage-capture
+']
@ -1267,12 +1247,39 @@ new file mode 100644
+ -rm -rf $(CODE_COVERAGE_OUTPUT_FILE) $(CODE_COVERAGE_OUTPUT_FILE).tmp $(CODE_COVERAGE_OUTPUT_DIRECTORY)
+ -find . \( -name "*.gcda" -o -name "*.gcno" -o -name "*.gcov" \) -delete
+']
+ ], [
+ [CODE_COVERAGE_RULES_CHECK='
+])
+
+AC_DEFUN([_AX_CODE_COVERAGE_DISABLED],[
+ [CODE_COVERAGE_RULES_CHECK='
+ @echo "Need to reconfigure with --enable-code-coverage"
+']
+ CODE_COVERAGE_RULES_CAPTURE="$CODE_COVERAGE_RULES_CHECK"
+ CODE_COVERAGE_RULES_CLEAN=''
+ ']
+ CODE_COVERAGE_RULES_CAPTURE="$CODE_COVERAGE_RULES_CHECK"
+ CODE_COVERAGE_RULES_CLEAN=''
+])
+
+AC_DEFUN([AX_CODE_COVERAGE],[
+ dnl Check for --enable-code-coverage
+
+ # allow to override gcov location
+ AC_ARG_WITH([gcov],
+ [AS_HELP_STRING([--with-gcov[=GCOV]], [use given GCOV for coverage (GCOV=gcov).])],
+ [_AX_CODE_COVERAGE_GCOV_PROG_WITH=$with_gcov],
+ [_AX_CODE_COVERAGE_GCOV_PROG_WITH=gcov])
+
+ AC_MSG_CHECKING([whether to build with code coverage support])
+ AC_ARG_ENABLE([code-coverage],
+ AS_HELP_STRING([--enable-code-coverage],
+ [Whether to enable code coverage support]),,
+ enable_code_coverage=no)
+
+ AM_CONDITIONAL([CODE_COVERAGE_ENABLED], [test "x$enable_code_coverage" = xyes])
+ AC_SUBST([CODE_COVERAGE_ENABLED], [$enable_code_coverage])
+ AC_MSG_RESULT($enable_code_coverage)
+
+ AS_IF([ test "x$enable_code_coverage" = xyes ], [
+ _AX_CODE_COVERAGE_ENABLED
+ ], [
+ _AX_CODE_COVERAGE_DISABLED
+ ])
+
+[CODE_COVERAGE_RULES='
@ -1333,6 +1340,9 @@ new file mode 100644
+CODE_COVERAGE_GENHTML_OPTIONS ?= $(CODE_COVERAGE_GENHTML_OPTIONS_DEFAULT)
+CODE_COVERAGE_IGNORE_PATTERN ?=
+
+GITIGNOREFILES ?=
+GITIGNOREFILES += $(CODE_COVERAGE_OUTPUT_FILE) $(CODE_COVERAGE_OUTPUT_DIRECTORY)
+
+code_coverage_v_lcov_cap = $(code_coverage_v_lcov_cap_$(V))
+code_coverage_v_lcov_cap_ = $(code_coverage_v_lcov_cap_$(AM_DEFAULT_VERBOSITY))
+code_coverage_v_lcov_cap_0 = @echo " LCOV --capture"\
@ -1362,9 +1372,6 @@ new file mode 100644
+
+'"$CODE_COVERAGE_RULES_CLEAN"'
+
+GITIGNOREFILES ?=
+GITIGNOREFILES += $(CODE_COVERAGE_OUTPUT_FILE) $(CODE_COVERAGE_OUTPUT_DIRECTORY)
+
+A''M_DISTCHECK_CONFIGURE_FLAGS ?=
+A''M_DISTCHECK_CONFIGURE_FLAGS += --disable-code-coverage
+

8
academic/umfpack/umfpack.SlackBuild
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@ -2,7 +2,7 @@
# Slackware build script for UMFPACK
# Copyright 2013-2018 Kyle Guinn <elyk03@gmail.com>, USA
# Copyright 2013-2019 Kyle Guinn <elyk03@gmail.com>
# All rights reserved.
#
# Redistribution and use of this script, with or without modification, is
@ -25,9 +25,9 @@
PRGNAM=umfpack
SRCNAM=SuiteSparse
SUBDIR=UMFPACK
VERSION=${VERSION:-5.7.6}
SRCVER=${SRCVER:-5.2.0}
BUILD=${BUILD:-4}
VERSION=${VERSION:-5.7.8}
SRCVER=${SRCVER:-5.4.0}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
if [ -z "$ARCH" ]; then

6
academic/umfpack/umfpack.info
View File

@ -1,8 +1,8 @@
PRGNAM="umfpack"
VERSION="5.7.6"
VERSION="5.7.8"
HOMEPAGE="http://faculty.cse.tamu.edu/davis/suitesparse.html"
DOWNLOAD="http://faculty.cse.tamu.edu/davis/SuiteSparse/SuiteSparse-5.2.0.tar.gz"
MD5SUM="8e625539dbeed061cc62fbdfed9be7cf"
DOWNLOAD="http://faculty.cse.tamu.edu/davis/SuiteSparse/SuiteSparse-5.4.0.tar.gz"
MD5SUM="4a6d4e74fc44c503f52996ae95cad03a"
DOWNLOAD_x86_64=""
MD5SUM_x86_64=""
REQUIRES="blas suitesparseconfig amd cholmod"