academic/qrupdate: Improve BLAS/LAPACK support + New maintainer.
Signed-off-by: Kyle Guinn <elyk03@gmail.com>
This commit is contained in:
Kyle Guinn
Willy Sudiarto Raharjo
parent
7a3d199311
commit
152a8346eb
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@ -1,6 +1,12 @@
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qrupdate (A Fortran library for QR and Cholesky decompositions)
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qrupdate is a Fortran library for fast updates of QR and Cholesky
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decompositions.
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qrupdate is an optional dependency for the octave package.
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This requires a BLAS/LAPACK implementation. Choose one of these package sets:
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* OpenBLAS (includes both a BLAS and a LAPACK implementation)
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* atlas (includes both a BLAS and a LAPACK implementation)
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* blas, lapack (the Netlib reference implementations)
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If more than one set is installed (assuming there are no packaging conflicts)
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then the auto-detection will use the first implementation from this list that
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it finds. If in doubt, choose the Netlib reference implementations; other
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packages that require a BLAS or LAPACK implementation may not build if they
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are not configured to detect/use alternate implementations.
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@ -0,0 +1,21 @@
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diff --git a/m4/ax_blas.m4 b/m4/ax_blas.m4
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--- a/m4/ax_blas.m4
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+++ b/m4/ax_blas.m4
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@@ -116,13 +116,10 @@
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# BLAS in ATLAS library? (http://math-atlas.sourceforge.net/)
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if test $ax_blas_ok = no; then
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- AC_CHECK_LIB(atlas, ATL_xerbla,
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- [AC_CHECK_LIB(f77blas, $sgemm,
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- [AC_CHECK_LIB(cblas, cblas_dgemm,
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- [ax_blas_ok=yes
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- BLAS_LIBS="-lcblas -lf77blas -latlas"],
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- [], [-lf77blas -latlas])],
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- [], [-latlas])])
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+ AC_CHECK_LIB(tatlas, $sgemm,
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+ [ax_blas_ok=yes; BLAS_LIBS="-ltatlas"],
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+ [AC_CHECK_LIB(satlas, $sgemm,
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+ [ax_blas_ok=yes; BLAS_LIBS="-lsatlas"])])
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fi
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# BLAS in PhiPACK libraries? (requires generic BLAS lib, too)
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@ -0,0 +1,504 @@
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diff --git a/Makefile.am b/Makefile.am
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new file mode 100644
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--- /dev/null
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+++ b/Makefile.am
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@@ -0,0 +1,3 @@
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+SUBDIRS = src test
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+
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+pkgconfig_DATA = qrupdate.pc
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diff --git a/ax_blas.m4 b/ax_blas.m4
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new file mode 100644
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--- /dev/null
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+++ b/ax_blas.m4
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@@ -0,0 +1,238 @@
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+# ===========================================================================
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+# https://www.gnu.org/software/autoconf-archive/ax_blas.html
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+# ===========================================================================
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+#
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+# SYNOPSIS
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+#
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+# AX_BLAS([ACTION-IF-FOUND[, ACTION-IF-NOT-FOUND]])
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+#
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+# DESCRIPTION
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+#
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+# This macro looks for a library that implements the BLAS linear-algebra
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+# interface (see http://www.netlib.org/blas/). On success, it sets the
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+# BLAS_LIBS output variable to hold the requisite library linkages.
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+#
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+# To link with BLAS, you should link with:
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+#
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+# $BLAS_LIBS $LIBS $FLIBS
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+#
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+# in that order. FLIBS is the output variable of the
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+# AC_F77_LIBRARY_LDFLAGS macro (called if necessary by AX_BLAS), and is
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+# sometimes necessary in order to link with F77 libraries. Users will also
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+# need to use AC_F77_DUMMY_MAIN (see the autoconf manual), for the same
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+# reason.
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+#
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+# Many libraries are searched for, from ATLAS to CXML to ESSL. The user
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+# may also use --with-blas=<lib> in order to use some specific BLAS
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+# library <lib>. In order to link successfully, however, be aware that you
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+# will probably need to use the same Fortran compiler (which can be set
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+# via the F77 env. var.) as was used to compile the BLAS library.
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+#
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+# ACTION-IF-FOUND is a list of shell commands to run if a BLAS library is
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+# found, and ACTION-IF-NOT-FOUND is a list of commands to run it if it is
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+# not found. If ACTION-IF-FOUND is not specified, the default action will
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+# define HAVE_BLAS.
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+#
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+# LICENSE
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+#
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+# Copyright (c) 2008 Steven G. Johnson <stevenj@alum.mit.edu>
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+#
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+# This program is free software: you can redistribute it and/or modify it
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+# under the terms of the GNU General Public License as published by the
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+# Free Software Foundation, either version 3 of the License, or (at your
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+# option) any later version.
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+#
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+# This program is distributed in the hope that it will be useful, but
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+# WITHOUT ANY WARRANTY; without even the implied warranty of
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+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General
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+# Public License for more details.
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+#
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+# You should have received a copy of the GNU General Public License along
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+# with this program. If not, see <https://www.gnu.org/licenses/>.
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+#
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+# As a special exception, the respective Autoconf Macro's copyright owner
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+# gives unlimited permission to copy, distribute and modify the configure
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+# scripts that are the output of Autoconf when processing the Macro. You
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+# need not follow the terms of the GNU General Public License when using
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+# or distributing such scripts, even though portions of the text of the
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+# Macro appear in them. The GNU General Public License (GPL) does govern
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+# all other use of the material that constitutes the Autoconf Macro.
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+#
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+# This special exception to the GPL applies to versions of the Autoconf
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+# Macro released by the Autoconf Archive. When you make and distribute a
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+# modified version of the Autoconf Macro, you may extend this special
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+# exception to the GPL to apply to your modified version as well.
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+
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+#serial 15
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+
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+AU_ALIAS([ACX_BLAS], [AX_BLAS])
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+AC_DEFUN([AX_BLAS], [
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+AC_PREREQ(2.50)
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+AC_REQUIRE([AC_F77_LIBRARY_LDFLAGS])
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+AC_REQUIRE([AC_CANONICAL_HOST])
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+ax_blas_ok=no
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+
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+AC_ARG_WITH(blas,
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+ [AS_HELP_STRING([--with-blas=<lib>], [use BLAS library <lib>])])
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+case $with_blas in
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+ yes | "") ;;
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+ no) ax_blas_ok=disable ;;
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+ -* | */* | *.a | *.so | *.so.* | *.o) BLAS_LIBS="$with_blas" ;;
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+ *) BLAS_LIBS="-l$with_blas" ;;
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+esac
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+
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+# Get fortran linker names of BLAS functions to check for.
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+AC_F77_FUNC(sgemm)
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+AC_F77_FUNC(dgemm)
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+
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+ax_blas_save_LIBS="$LIBS"
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+LIBS="$LIBS $FLIBS"
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+
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+# First, check BLAS_LIBS environment variable
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+if test $ax_blas_ok = no; then
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+if test "x$BLAS_LIBS" != x; then
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+ save_LIBS="$LIBS"; LIBS="$BLAS_LIBS $LIBS"
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+ AC_MSG_CHECKING([for $sgemm in $BLAS_LIBS])
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+ AC_TRY_LINK_FUNC($sgemm, [ax_blas_ok=yes], [BLAS_LIBS=""])
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+ AC_MSG_RESULT($ax_blas_ok)
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+ LIBS="$save_LIBS"
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+fi
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+fi
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+
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+# BLAS linked to by default? (happens on some supercomputers)
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+if test $ax_blas_ok = no; then
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+ save_LIBS="$LIBS"; LIBS="$LIBS"
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+ AC_MSG_CHECKING([if $sgemm is being linked in already])
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+ AC_TRY_LINK_FUNC($sgemm, [ax_blas_ok=yes])
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+ AC_MSG_RESULT($ax_blas_ok)
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+ LIBS="$save_LIBS"
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+fi
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+
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+# BLAS in OpenBLAS library? (http://xianyi.github.com/OpenBLAS/)
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+if test $ax_blas_ok = no; then
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+ AC_CHECK_LIB(openblas, $sgemm, [ax_blas_ok=yes
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+ BLAS_LIBS="-lopenblas"])
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+fi
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+
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+# BLAS in ATLAS library? (http://math-atlas.sourceforge.net/)
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+if test $ax_blas_ok = no; then
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+ AC_CHECK_LIB(atlas, ATL_xerbla,
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+ [AC_CHECK_LIB(f77blas, $sgemm,
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+ [AC_CHECK_LIB(cblas, cblas_dgemm,
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+ [ax_blas_ok=yes
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+ BLAS_LIBS="-lcblas -lf77blas -latlas"],
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+ [], [-lf77blas -latlas])],
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+ [], [-latlas])])
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+fi
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+
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+# BLAS in PhiPACK libraries? (requires generic BLAS lib, too)
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+if test $ax_blas_ok = no; then
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+ AC_CHECK_LIB(blas, $sgemm,
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+ [AC_CHECK_LIB(dgemm, $dgemm,
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+ [AC_CHECK_LIB(sgemm, $sgemm,
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+ [ax_blas_ok=yes; BLAS_LIBS="-lsgemm -ldgemm -lblas"],
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+ [], [-lblas])],
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+ [], [-lblas])])
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+fi
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+
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+# BLAS in Intel MKL library?
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+if test $ax_blas_ok = no; then
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+ # MKL for gfortran
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+ if test x"$ac_cv_fc_compiler_gnu" = xyes; then
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+ # 64 bit
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+ if test $host_cpu = x86_64; then
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+ AC_CHECK_LIB(mkl_gf_lp64, $sgemm,
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+ [ax_blas_ok=yes;BLAS_LIBS="-lmkl_gf_lp64 -lmkl_sequential -lmkl_core -lpthread"],,
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+ [-lmkl_gf_lp64 -lmkl_sequential -lmkl_core -lpthread])
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+ # 32 bit
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+ elif test $host_cpu = i686; then
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+ AC_CHECK_LIB(mkl_gf, $sgemm,
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+ [ax_blas_ok=yes;BLAS_LIBS="-lmkl_gf -lmkl_sequential -lmkl_core -lpthread"],,
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+ [-lmkl_gf -lmkl_sequential -lmkl_core -lpthread])
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+ fi
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+ # MKL for other compilers (Intel, PGI, ...?)
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+ else
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+ # 64-bit
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+ if test $host_cpu = x86_64; then
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+ AC_CHECK_LIB(mkl_intel_lp64, $sgemm,
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+ [ax_blas_ok=yes;BLAS_LIBS="-lmkl_intel_lp64 -lmkl_sequential -lmkl_core -lpthread"],,
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+ [-lmkl_intel_lp64 -lmkl_sequential -lmkl_core -lpthread])
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+ # 32-bit
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+ elif test $host_cpu = i686; then
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+ AC_CHECK_LIB(mkl_intel, $sgemm,
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+ [ax_blas_ok=yes;BLAS_LIBS="-lmkl_intel -lmkl_sequential -lmkl_core -lpthread"],,
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+ [-lmkl_intel -lmkl_sequential -lmkl_core -lpthread])
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+ fi
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+ fi
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+fi
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+# Old versions of MKL
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+if test $ax_blas_ok = no; then
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+ AC_CHECK_LIB(mkl, $sgemm, [ax_blas_ok=yes;BLAS_LIBS="-lmkl -lguide -lpthread"],,[-lguide -lpthread])
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+fi
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+
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+# BLAS in Apple vecLib library?
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+if test $ax_blas_ok = no; then
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+ save_LIBS="$LIBS"; LIBS="-framework vecLib $LIBS"
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+ AC_MSG_CHECKING([for $sgemm in -framework vecLib])
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+ AC_TRY_LINK_FUNC($sgemm, [ax_blas_ok=yes;BLAS_LIBS="-framework vecLib"])
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+ AC_MSG_RESULT($ax_blas_ok)
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+ LIBS="$save_LIBS"
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+fi
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+
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+# BLAS in Alpha CXML library?
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+if test $ax_blas_ok = no; then
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+ AC_CHECK_LIB(cxml, $sgemm, [ax_blas_ok=yes;BLAS_LIBS="-lcxml"])
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+fi
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+
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+# BLAS in Alpha DXML library? (now called CXML, see above)
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+if test $ax_blas_ok = no; then
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+ AC_CHECK_LIB(dxml, $sgemm, [ax_blas_ok=yes;BLAS_LIBS="-ldxml"])
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+fi
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+
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+# BLAS in Sun Performance library?
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+if test $ax_blas_ok = no; then
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+ if test "x$GCC" != xyes; then # only works with Sun CC
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+ AC_CHECK_LIB(sunmath, acosp,
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+ [AC_CHECK_LIB(sunperf, $sgemm,
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+ [BLAS_LIBS="-xlic_lib=sunperf -lsunmath"
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+ ax_blas_ok=yes],[],[-lsunmath])])
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+ fi
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+fi
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+
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+# BLAS in SCSL library? (SGI/Cray Scientific Library)
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+if test $ax_blas_ok = no; then
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+ AC_CHECK_LIB(scs, $sgemm, [ax_blas_ok=yes; BLAS_LIBS="-lscs"])
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+fi
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+
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+# BLAS in SGIMATH library?
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+if test $ax_blas_ok = no; then
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+ AC_CHECK_LIB(complib.sgimath, $sgemm,
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+ [ax_blas_ok=yes; BLAS_LIBS="-lcomplib.sgimath"])
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+fi
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+
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+# BLAS in IBM ESSL library? (requires generic BLAS lib, too)
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+if test $ax_blas_ok = no; then
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+ AC_CHECK_LIB(blas, $sgemm,
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+ [AC_CHECK_LIB(essl, $sgemm,
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+ [ax_blas_ok=yes; BLAS_LIBS="-lessl -lblas"],
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+ [], [-lblas $FLIBS])])
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+fi
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+
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+# Generic BLAS library?
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+if test $ax_blas_ok = no; then
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+ AC_CHECK_LIB(blas, $sgemm, [ax_blas_ok=yes; BLAS_LIBS="-lblas"])
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+fi
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+
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+AC_SUBST(BLAS_LIBS)
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+
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+LIBS="$ax_blas_save_LIBS"
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+
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+# Finally, execute ACTION-IF-FOUND/ACTION-IF-NOT-FOUND:
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+if test x"$ax_blas_ok" = xyes; then
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+ ifelse([$1],,AC_DEFINE(HAVE_BLAS,1,[Define if you have a BLAS library.]),[$1])
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+ :
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+else
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+ ax_blas_ok=no
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+ $2
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+fi
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+])dnl AX_BLAS
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diff --git a/ax_lapack.m4 b/ax_lapack.m4
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new file mode 100644
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--- /dev/null
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+++ b/ax_lapack.m4
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@@ -0,0 +1,131 @@
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+# ===========================================================================
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+# https://www.gnu.org/software/autoconf-archive/ax_lapack.html
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+# ===========================================================================
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+#
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+# SYNOPSIS
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+#
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+# AX_LAPACK([ACTION-IF-FOUND[, ACTION-IF-NOT-FOUND]])
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+#
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+# DESCRIPTION
|
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+#
|
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+# This macro looks for a library that implements the LAPACK linear-algebra
|
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+# interface (see http://www.netlib.org/lapack/). On success, it sets the
|
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+# LAPACK_LIBS output variable to hold the requisite library linkages.
|
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+#
|
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+# To link with LAPACK, you should link with:
|
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+#
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+# $LAPACK_LIBS $BLAS_LIBS $LIBS $FLIBS
|
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+#
|
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+# in that order. BLAS_LIBS is the output variable of the AX_BLAS macro,
|
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+# called automatically. FLIBS is the output variable of the
|
||||
+# AC_F77_LIBRARY_LDFLAGS macro (called if necessary by AX_BLAS), and is
|
||||
+# sometimes necessary in order to link with F77 libraries. Users will also
|
||||
+# need to use AC_F77_DUMMY_MAIN (see the autoconf manual), for the same
|
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+# reason.
|
||||
+#
|
||||
+# The user may also use --with-lapack=<lib> in order to use some specific
|
||||
+# LAPACK library <lib>. In order to link successfully, however, be aware
|
||||
+# that you will probably need to use the same Fortran compiler (which can
|
||||
+# be set via the F77 env. var.) as was used to compile the LAPACK and BLAS
|
||||
+# libraries.
|
||||
+#
|
||||
+# ACTION-IF-FOUND is a list of shell commands to run if a LAPACK library
|
||||
+# is found, and ACTION-IF-NOT-FOUND is a list of commands to run it if it
|
||||
+# is not found. If ACTION-IF-FOUND is not specified, the default action
|
||||
+# will define HAVE_LAPACK.
|
||||
+#
|
||||
+# LICENSE
|
||||
+#
|
||||
+# Copyright (c) 2009 Steven G. Johnson <stevenj@alum.mit.edu>
|
||||
+#
|
||||
+# This program is free software: you can redistribute it and/or modify it
|
||||
+# under the terms of the GNU General Public License as published by the
|
||||
+# Free Software Foundation, either version 3 of the License, or (at your
|
||||
+# option) any later version.
|
||||
+#
|
||||
+# This program is distributed in the hope that it will be useful, but
|
||||
+# WITHOUT ANY WARRANTY; without even the implied warranty of
|
||||
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General
|
||||
+# Public License for more details.
|
||||
+#
|
||||
+# You should have received a copy of the GNU General Public License along
|
||||
+# with this program. If not, see <https://www.gnu.org/licenses/>.
|
||||
+#
|
||||
+# As a special exception, the respective Autoconf Macro's copyright owner
|
||||
+# gives unlimited permission to copy, distribute and modify the configure
|
||||
+# scripts that are the output of Autoconf when processing the Macro. You
|
||||
+# need not follow the terms of the GNU General Public License when using
|
||||
+# or distributing such scripts, even though portions of the text of the
|
||||
+# Macro appear in them. The GNU General Public License (GPL) does govern
|
||||
+# all other use of the material that constitutes the Autoconf Macro.
|
||||
+#
|
||||
+# This special exception to the GPL applies to versions of the Autoconf
|
||||
+# Macro released by the Autoconf Archive. When you make and distribute a
|
||||
+# modified version of the Autoconf Macro, you may extend this special
|
||||
+# exception to the GPL to apply to your modified version as well.
|
||||
+
|
||||
+#serial 8
|
||||
+
|
||||
+AU_ALIAS([ACX_LAPACK], [AX_LAPACK])
|
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+AC_DEFUN([AX_LAPACK], [
|
||||
+AC_REQUIRE([AX_BLAS])
|
||||
+ax_lapack_ok=no
|
||||
+
|
||||
+AC_ARG_WITH(lapack,
|
||||
+ [AS_HELP_STRING([--with-lapack=<lib>], [use LAPACK library <lib>])])
|
||||
+case $with_lapack in
|
||||
+ yes | "") ;;
|
||||
+ no) ax_lapack_ok=disable ;;
|
||||
+ -* | */* | *.a | *.so | *.so.* | *.o) LAPACK_LIBS="$with_lapack" ;;
|
||||
+ *) LAPACK_LIBS="-l$with_lapack" ;;
|
||||
+esac
|
||||
+
|
||||
+# Get fortran linker name of LAPACK function to check for.
|
||||
+AC_F77_FUNC(cheev)
|
||||
+
|
||||
+# We cannot use LAPACK if BLAS is not found
|
||||
+if test "x$ax_blas_ok" != xyes; then
|
||||
+ ax_lapack_ok=noblas
|
||||
+ LAPACK_LIBS=""
|
||||
+fi
|
||||
+
|
||||
+# First, check LAPACK_LIBS environment variable
|
||||
+if test "x$LAPACK_LIBS" != x; then
|
||||
+ save_LIBS="$LIBS"; LIBS="$LAPACK_LIBS $BLAS_LIBS $LIBS $FLIBS"
|
||||
+ AC_MSG_CHECKING([for $cheev in $LAPACK_LIBS])
|
||||
+ AC_TRY_LINK_FUNC($cheev, [ax_lapack_ok=yes], [LAPACK_LIBS=""])
|
||||
+ AC_MSG_RESULT($ax_lapack_ok)
|
||||
+ LIBS="$save_LIBS"
|
||||
+ if test $ax_lapack_ok = no; then
|
||||
+ LAPACK_LIBS=""
|
||||
+ fi
|
||||
+fi
|
||||
+
|
||||
+# LAPACK linked to by default? (is sometimes included in BLAS lib)
|
||||
+if test $ax_lapack_ok = no; then
|
||||
+ save_LIBS="$LIBS"; LIBS="$LIBS $BLAS_LIBS $FLIBS"
|
||||
+ AC_CHECK_FUNC($cheev, [ax_lapack_ok=yes])
|
||||
+ LIBS="$save_LIBS"
|
||||
+fi
|
||||
+
|
||||
+# Generic LAPACK library?
|
||||
+for lapack in lapack lapack_rs6k; do
|
||||
+ if test $ax_lapack_ok = no; then
|
||||
+ save_LIBS="$LIBS"; LIBS="$BLAS_LIBS $LIBS"
|
||||
+ AC_CHECK_LIB($lapack, $cheev,
|
||||
+ [ax_lapack_ok=yes; LAPACK_LIBS="-l$lapack"], [], [$FLIBS])
|
||||
+ LIBS="$save_LIBS"
|
||||
+ fi
|
||||
+done
|
||||
+
|
||||
+AC_SUBST(LAPACK_LIBS)
|
||||
+
|
||||
+# Finally, execute ACTION-IF-FOUND/ACTION-IF-NOT-FOUND:
|
||||
+if test x"$ax_lapack_ok" = xyes; then
|
||||
+ ifelse([$1],,AC_DEFINE(HAVE_LAPACK,1,[Define if you have LAPACK library.]),[$1])
|
||||
+ :
|
||||
+else
|
||||
+ ax_lapack_ok=no
|
||||
+ $2
|
||||
+fi
|
||||
+])dnl AX_LAPACK
|
||||
diff --git a/configure.ac b/configure.ac
|
||||
new file mode 100644
|
||||
--- /dev/null
|
||||
+++ b/configure.ac
|
||||
@@ -0,0 +1,36 @@
|
||||
+# -*- Autoconf -*-
|
||||
+# Process this file with autoconf to produce a configure script.
|
||||
+
|
||||
+AC_PREREQ([2.69])
|
||||
+AC_INIT([qrupdate],[1.1.2],[highegg@gmail.com],[qrupdate],[https://sourceforge.net/projects/qrupdate/])
|
||||
+AC_CONFIG_SRCDIR([src/sqr1up.f])
|
||||
+AC_CONFIG_HEADERS([src/config.h])
|
||||
+AM_INIT_AUTOMAKE([foreign])
|
||||
+LT_INIT
|
||||
+
|
||||
+# Checks for programs.
|
||||
+AC_PROG_INSTALL
|
||||
+AC_PROG_F77
|
||||
+
|
||||
+# Checks for libraries.
|
||||
+sinclude([ax_blas.m4])
|
||||
+AX_BLAS([], [AC_MSG_ERROR([cannot find BLAS])])
|
||||
+
|
||||
+sinclude([ax_lapack.m4])
|
||||
+AX_LAPACK([], [AC_MSG_ERROR([cannot find LAPACK])])
|
||||
+
|
||||
+# Checks for header files.
|
||||
+
|
||||
+# Checks for typedefs, structures, and compiler characteristics.
|
||||
+
|
||||
+# Checks for library functions.
|
||||
+
|
||||
+m4_ifdef([PKG_INSTALLDIR], [PKG_INSTALLDIR], [AC_SUBST([pkgconfigdir], [${libdir}/pkgconfig])])
|
||||
+
|
||||
+AC_CONFIG_FILES([
|
||||
+ qrupdate.pc
|
||||
+ Makefile
|
||||
+ src/Makefile
|
||||
+ test/Makefile
|
||||
+])
|
||||
+AC_OUTPUT
|
||||
diff --git a/qrupdate.pc.in b/qrupdate.pc.in
|
||||
new file mode 100644
|
||||
--- /dev/null
|
||||
+++ b/qrupdate.pc.in
|
||||
@@ -0,0 +1,10 @@
|
||||
+prefix=@prefix@
|
||||
+exec_prefix=@exec_prefix@
|
||||
+libdir=@libdir@
|
||||
+
|
||||
+Name: @PACKAGE_NAME@
|
||||
+Description: Library for fast updating of QR and Cholesky decompositions
|
||||
+Version: @PACKAGE_VERSION@
|
||||
+URL: @PACKAGE_URL@
|
||||
+Libs: -L${libdir} -lqrupdate
|
||||
+Libs.private: @LAPACK_LIBS@ @BLAS_LIBS@
|
||||
diff --git a/src/Makefile.am b/src/Makefile.am
|
||||
new file mode 100644
|
||||
--- /dev/null
|
||||
+++ b/src/Makefile.am
|
||||
@@ -0,0 +1,19 @@
|
||||
+AM_FFLAGS = -fimplicit-none -O3 -funroll-loops
|
||||
+
|
||||
+SRC = caxcpy.f cch1dn.f cch1up.f cchdex.f cchinx.f cchshx.f cgqvec.f \
|
||||
+cqhqr.f cqr1up.f cqrdec.f cqrder.f cqrinc.f cqrinr.f cqrot.f cqrqh.f \
|
||||
+cqrshc.f cqrtv1.f dch1dn.f dch1up.f dchdex.f dchinx.f dchshx.f \
|
||||
+dgqvec.f dqhqr.f dqr1up.f dqrdec.f dqrder.f dqrinc.f dqrinr.f dqrot.f \
|
||||
+dqrqh.f dqrshc.f dqrtv1.f sch1dn.f sch1up.f schdex.f schinx.f schshx.f \
|
||||
+sgqvec.f sqhqr.f sqr1up.f sqrdec.f sqrder.f sqrinc.f sqrinr.f sqrot.f \
|
||||
+sqrqh.f sqrshc.f sqrtv1.f zaxcpy.f zch1dn.f zch1up.f zchdex.f zchinx.f \
|
||||
+zchshx.f zgqvec.f zqhqr.f zqr1up.f zqrdec.f zqrder.f zqrinc.f zqrinr.f \
|
||||
+zqrot.f zqrqh.f zqrshc.f zqrtv1.f \
|
||||
+clu1up.f dlu1up.f slu1up.f zlu1up.f \
|
||||
+clup1up.f dlup1up.f slup1up.f zlup1up.f
|
||||
+
|
||||
+lib_LTLIBRARIES = libqrupdate.la
|
||||
+
|
||||
+libqrupdate_la_SOURCES = $(SRC)
|
||||
+libqrupdate_la_LIBADD = $(LAPACK_LIBS) $(BLAS_LIBS)
|
||||
+libqrupdate_la_LDFLAGS = -no-undefined -version-number 1:1:2
|
||||
diff --git a/test/Makefile.am b/test/Makefile.am
|
||||
new file mode 100644
|
||||
--- /dev/null
|
||||
+++ b/test/Makefile.am
|
||||
@@ -0,0 +1,32 @@
|
||||
+AM_FFLAGS = -fimplicit-none -O3 -funroll-loops
|
||||
+LDADD = $(top_builddir)/src/libqrupdate.la
|
||||
+
|
||||
+EXTRA_DIST = report_results
|
||||
+
|
||||
+check_PROGRAMS = \
|
||||
+ tqr1up tqrinc tqrdec tqrshc tqrinr tqrder \
|
||||
+ tch1up tch1dn tchinx tchdex tchshx \
|
||||
+ tlu1up tlup1up
|
||||
+
|
||||
+tqr1up_SOURCES = tqr1up.f utils.f
|
||||
+tqrinc_SOURCES = tqrinc.f utils.f
|
||||
+tqrdec_SOURCES = tqrdec.f utils.f
|
||||
+tqrshc_SOURCES = tqrshc.f utils.f
|
||||
+tqrinr_SOURCES = tqrinr.f utils.f
|
||||
+tqrder_SOURCES = tqrder.f utils.f
|
||||
+tch1up_SOURCES = tch1up.f utils.f
|
||||
+tch1dn_SOURCES = tch1dn.f utils.f
|
||||
+tchinx_SOURCES = tchinx.f utils.f
|
||||
+tchdex_SOURCES = tchdex.f utils.f
|
||||
+tchshx_SOURCES = tchshx.f utils.f
|
||||
+tlu1up_SOURCES = tlu1up.f utils.f
|
||||
+tlup1up_SOURCES = tlup1up.f utils.f
|
||||
+
|
||||
+check-local: $(check_PROGRAMS)
|
||||
+ @for i in $(check_PROGRAMS); do \
|
||||
+ echo > $$i.out; \
|
||||
+ ./$$i | tee $$i.out; \
|
||||
+ done
|
||||
+ @$(srcdir)/report_results $(check_PROGRAMS:%=%.out)
|
||||
+
|
||||
+CLEANFILES = *.out
|
||||
|
|
@ -2,18 +2,36 @@
|
|||
|
||||
# Slackware build script for qrupdate
|
||||
|
||||
# Written by Pablo Santamaria (pablosantamaria@gmail.com)
|
||||
# Copyright 2017 Kyle Guinn <elyk03@gmail.com>, USA
|
||||
# All rights reserved.
|
||||
#
|
||||
# Redistribution and use of this script, with or without modification, is
|
||||
# permitted provided that the following conditions are met:
|
||||
#
|
||||
# 1. Redistributions of this script must retain the above copyright
|
||||
# notice, this list of conditions and the following disclaimer.
|
||||
#
|
||||
# THIS SOFTWARE IS PROVIDED BY THE AUTHOR "AS IS" AND ANY EXPRESS OR IMPLIED
|
||||
# WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF
|
||||
# MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO
|
||||
# EVENT SHALL THE AUTHOR BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL,
|
||||
# SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
|
||||
# PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS;
|
||||
# OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY,
|
||||
# WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR
|
||||
# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
|
||||
# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
|
||||
|
||||
PRGNAM=qrupdate
|
||||
VERSION=${VERSION:-1.1.2}
|
||||
BUILD=${BUILD:-2}
|
||||
BUILD=${BUILD:-3}
|
||||
TAG=${TAG:-_SBo}
|
||||
|
||||
if [ -z "$ARCH" ]; then
|
||||
case "$( uname -m )" in
|
||||
i?86) ARCH=i486 ;;
|
||||
case "$(uname -m)" in
|
||||
i?86) ARCH=i586 ;;
|
||||
arm*) ARCH=arm ;;
|
||||
*) ARCH=$( uname -m ) ;;
|
||||
*) ARCH=$(uname -m) ;;
|
||||
esac
|
||||
fi
|
||||
|
||||
|
|
@ -22,9 +40,14 @@ TMP=${TMP:-/tmp/SBo}
|
|||
PKG=$TMP/package-$PRGNAM
|
||||
OUTPUT=${OUTPUT:-/tmp}
|
||||
|
||||
DOCS="COPYING ChangeLog README"
|
||||
|
||||
if [ "$ARCH" = "i486" ]; then
|
||||
SLKCFLAGS="-O2 -march=i486 -mtune=i686"
|
||||
LIBDIRSUFFIX=""
|
||||
elif [ "$ARCH" = "i586" ]; then
|
||||
SLKCFLAGS="-O2 -march=i586 -mtune=i686"
|
||||
LIBDIRSUFFIX=""
|
||||
elif [ "$ARCH" = "i686" ]; then
|
||||
SLKCFLAGS="-O2 -march=i686 -mtune=i686"
|
||||
LIBDIRSUFFIX=""
|
||||
|
|
@ -45,21 +68,34 @@ rm -rf $PRGNAM-$VERSION
|
|||
tar xvf $CWD/$PRGNAM-$VERSION.tar.gz
|
||||
cd $PRGNAM-$VERSION
|
||||
chown -R root:root .
|
||||
find -L . \
|
||||
\( -perm 777 -o -perm 775 -o -perm 750 -o -perm 711 -o -perm 555 \
|
||||
-o -perm 511 \) -exec chmod 755 {} \; -o \
|
||||
\( -perm 666 -o -perm 664 -o -perm 640 -o -perm 600 -o -perm 444 \
|
||||
-o -perm 440 -o -perm 400 \) -exec chmod 644 {} \;
|
||||
chmod -R u+w,go-w,a+rX-st .
|
||||
|
||||
make solib FC=gfortran FFLAGS="$SLKCFLAGS -fimplicit-none -funroll-loops"
|
||||
make install-shlib LIBDIR=/usr/lib${LIBDIRSUFFIX} PREFIX=$PKG
|
||||
chmod 755 $PKG/usr/lib${LIBDIRSUFFIX}/libqrupdate.so.*
|
||||
patch -p1 < $CWD/patches/autotoolize.diff
|
||||
patch -p2 < $CWD/patches/atlas-lib-rename.diff
|
||||
autoreconf -vif
|
||||
|
||||
find $PKG -print0 | xargs -0 file | grep -e "executable" -e "shared object" | grep ELF \
|
||||
| cut -f 1 -d : | xargs strip --strip-unneeded 2> /dev/null || true
|
||||
./configure \
|
||||
--prefix=/usr \
|
||||
--libdir=/usr/lib${LIBDIRSUFFIX} \
|
||||
--sysconfdir=/etc \
|
||||
--localstatedir=/var \
|
||||
--mandir=/usr/man \
|
||||
--infodir=/usr/info \
|
||||
--docdir=/usr/doc/$PRGNAM-$VERSION \
|
||||
--enable-shared \
|
||||
--disable-static \
|
||||
--disable-dependency-tracking \
|
||||
--build=$ARCH-slackware-linux \
|
||||
FFLAGS="$SLKCFLAGS" \
|
||||
|
||||
make
|
||||
make check
|
||||
make install-strip DESTDIR=$PKG
|
||||
|
||||
find $PKG/usr/lib${LIBDIRSUFFIX} -name '*.la' -delete
|
||||
|
||||
mkdir -p $PKG/usr/doc/$PRGNAM-$VERSION
|
||||
install -m644 COPYING README ChangeLog $PKG/usr/doc/$PRGNAM-$VERSION
|
||||
cp -a $DOCS $PKG/usr/doc/$PRGNAM-$VERSION
|
||||
cat $CWD/$PRGNAM.SlackBuild > $PKG/usr/doc/$PRGNAM-$VERSION/$PRGNAM.SlackBuild
|
||||
|
||||
mkdir -p $PKG/install
|
||||
|
|
|
|||
|
|
@ -5,6 +5,6 @@ DOWNLOAD="http://downloads.sourceforge.net/qrupdate/qrupdate-1.1.2.tar.gz"
|
|||
MD5SUM="6d073887c6e858c24aeda5b54c57a8c4"
|
||||
DOWNLOAD_x86_64=""
|
||||
MD5SUM_x86_64=""
|
||||
REQUIRES="lapack"
|
||||
MAINTAINER="Pablo Santamaria"
|
||||
EMAIL="pablosantamaria@gmail.com"
|
||||
REQUIRES="blas lapack"
|
||||
MAINTAINER="Kyle Guinn"
|
||||
EMAIL="elyk03@gmail.com"
|
||||
|
|
|
|||
Loading…
Reference in New Issue