11919 lines
583 KiB
C
11919 lines
583 KiB
C
/* Generated by Cython 0.20.1 on Thu Apr 3 16:22:28 2014 */
|
|
|
|
#define PY_SSIZE_T_CLEAN
|
|
#ifndef CYTHON_USE_PYLONG_INTERNALS
|
|
#ifdef PYLONG_BITS_IN_DIGIT
|
|
#define CYTHON_USE_PYLONG_INTERNALS 0
|
|
#else
|
|
#include "pyconfig.h"
|
|
#ifdef PYLONG_BITS_IN_DIGIT
|
|
#define CYTHON_USE_PYLONG_INTERNALS 1
|
|
#else
|
|
#define CYTHON_USE_PYLONG_INTERNALS 0
|
|
#endif
|
|
#endif
|
|
#endif
|
|
#include "Python.h"
|
|
#ifndef Py_PYTHON_H
|
|
#error Python headers needed to compile C extensions, please install development version of Python.
|
|
#elif PY_VERSION_HEX < 0x02040000
|
|
#error Cython requires Python 2.4+.
|
|
#else
|
|
#define CYTHON_ABI "0_20_1"
|
|
#include <stddef.h> /* For offsetof */
|
|
#ifndef offsetof
|
|
#define offsetof(type, member) ( (size_t) & ((type*)0) -> member )
|
|
#endif
|
|
#if !defined(WIN32) && !defined(MS_WINDOWS)
|
|
#ifndef __stdcall
|
|
#define __stdcall
|
|
#endif
|
|
#ifndef __cdecl
|
|
#define __cdecl
|
|
#endif
|
|
#ifndef __fastcall
|
|
#define __fastcall
|
|
#endif
|
|
#endif
|
|
#ifndef DL_IMPORT
|
|
#define DL_IMPORT(t) t
|
|
#endif
|
|
#ifndef DL_EXPORT
|
|
#define DL_EXPORT(t) t
|
|
#endif
|
|
#ifndef PY_LONG_LONG
|
|
#define PY_LONG_LONG LONG_LONG
|
|
#endif
|
|
#ifndef Py_HUGE_VAL
|
|
#define Py_HUGE_VAL HUGE_VAL
|
|
#endif
|
|
#ifdef PYPY_VERSION
|
|
#define CYTHON_COMPILING_IN_PYPY 1
|
|
#define CYTHON_COMPILING_IN_CPYTHON 0
|
|
#else
|
|
#define CYTHON_COMPILING_IN_PYPY 0
|
|
#define CYTHON_COMPILING_IN_CPYTHON 1
|
|
#endif
|
|
#if CYTHON_COMPILING_IN_PYPY
|
|
#define Py_OptimizeFlag 0
|
|
#endif
|
|
#if PY_VERSION_HEX < 0x02050000
|
|
typedef int Py_ssize_t;
|
|
#define PY_SSIZE_T_MAX INT_MAX
|
|
#define PY_SSIZE_T_MIN INT_MIN
|
|
#define PY_FORMAT_SIZE_T ""
|
|
#define CYTHON_FORMAT_SSIZE_T ""
|
|
#define PyInt_FromSsize_t(z) PyInt_FromLong(z)
|
|
#define PyInt_AsSsize_t(o) __Pyx_PyInt_As_int(o)
|
|
#define PyNumber_Index(o) ((PyNumber_Check(o) && !PyFloat_Check(o)) ? PyNumber_Int(o) : \
|
|
(PyErr_Format(PyExc_TypeError, \
|
|
"expected index value, got %.200s", Py_TYPE(o)->tp_name), \
|
|
(PyObject*)0))
|
|
#define __Pyx_PyIndex_Check(o) (PyNumber_Check(o) && !PyFloat_Check(o) && \
|
|
!PyComplex_Check(o))
|
|
#define PyIndex_Check __Pyx_PyIndex_Check
|
|
#define PyErr_WarnEx(category, message, stacklevel) PyErr_Warn(category, message)
|
|
#define __PYX_BUILD_PY_SSIZE_T "i"
|
|
#else
|
|
#define __PYX_BUILD_PY_SSIZE_T "n"
|
|
#define CYTHON_FORMAT_SSIZE_T "z"
|
|
#define __Pyx_PyIndex_Check PyIndex_Check
|
|
#endif
|
|
#if PY_VERSION_HEX < 0x02060000
|
|
#define Py_REFCNT(ob) (((PyObject*)(ob))->ob_refcnt)
|
|
#define Py_TYPE(ob) (((PyObject*)(ob))->ob_type)
|
|
#define Py_SIZE(ob) (((PyVarObject*)(ob))->ob_size)
|
|
#define PyVarObject_HEAD_INIT(type, size) \
|
|
PyObject_HEAD_INIT(type) size,
|
|
#define PyType_Modified(t)
|
|
typedef struct {
|
|
void *buf;
|
|
PyObject *obj;
|
|
Py_ssize_t len;
|
|
Py_ssize_t itemsize;
|
|
int readonly;
|
|
int ndim;
|
|
char *format;
|
|
Py_ssize_t *shape;
|
|
Py_ssize_t *strides;
|
|
Py_ssize_t *suboffsets;
|
|
void *internal;
|
|
} Py_buffer;
|
|
#define PyBUF_SIMPLE 0
|
|
#define PyBUF_WRITABLE 0x0001
|
|
#define PyBUF_FORMAT 0x0004
|
|
#define PyBUF_ND 0x0008
|
|
#define PyBUF_STRIDES (0x0010 | PyBUF_ND)
|
|
#define PyBUF_C_CONTIGUOUS (0x0020 | PyBUF_STRIDES)
|
|
#define PyBUF_F_CONTIGUOUS (0x0040 | PyBUF_STRIDES)
|
|
#define PyBUF_ANY_CONTIGUOUS (0x0080 | PyBUF_STRIDES)
|
|
#define PyBUF_INDIRECT (0x0100 | PyBUF_STRIDES)
|
|
#define PyBUF_RECORDS (PyBUF_STRIDES | PyBUF_FORMAT | PyBUF_WRITABLE)
|
|
#define PyBUF_FULL (PyBUF_INDIRECT | PyBUF_FORMAT | PyBUF_WRITABLE)
|
|
typedef int (*getbufferproc)(PyObject *, Py_buffer *, int);
|
|
typedef void (*releasebufferproc)(PyObject *, Py_buffer *);
|
|
#endif
|
|
#if PY_MAJOR_VERSION < 3
|
|
#define __Pyx_BUILTIN_MODULE_NAME "__builtin__"
|
|
#define __Pyx_PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) \
|
|
PyCode_New(a+k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos)
|
|
#define __Pyx_DefaultClassType PyClass_Type
|
|
#else
|
|
#define __Pyx_BUILTIN_MODULE_NAME "builtins"
|
|
#define __Pyx_PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) \
|
|
PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos)
|
|
#define __Pyx_DefaultClassType PyType_Type
|
|
#endif
|
|
#if PY_VERSION_HEX < 0x02060000
|
|
#define PyUnicode_FromString(s) PyUnicode_Decode(s, strlen(s), "UTF-8", "strict")
|
|
#endif
|
|
#if PY_MAJOR_VERSION >= 3
|
|
#define Py_TPFLAGS_CHECKTYPES 0
|
|
#define Py_TPFLAGS_HAVE_INDEX 0
|
|
#endif
|
|
#if (PY_VERSION_HEX < 0x02060000) || (PY_MAJOR_VERSION >= 3)
|
|
#define Py_TPFLAGS_HAVE_NEWBUFFER 0
|
|
#endif
|
|
#if PY_VERSION_HEX < 0x02060000
|
|
#define Py_TPFLAGS_HAVE_VERSION_TAG 0
|
|
#endif
|
|
#if PY_VERSION_HEX < 0x02060000 && !defined(Py_TPFLAGS_IS_ABSTRACT)
|
|
#define Py_TPFLAGS_IS_ABSTRACT 0
|
|
#endif
|
|
#if PY_VERSION_HEX < 0x030400a1 && !defined(Py_TPFLAGS_HAVE_FINALIZE)
|
|
#define Py_TPFLAGS_HAVE_FINALIZE 0
|
|
#endif
|
|
#if PY_VERSION_HEX > 0x03030000 && defined(PyUnicode_KIND)
|
|
#define CYTHON_PEP393_ENABLED 1
|
|
#define __Pyx_PyUnicode_READY(op) (likely(PyUnicode_IS_READY(op)) ? \
|
|
0 : _PyUnicode_Ready((PyObject *)(op)))
|
|
#define __Pyx_PyUnicode_GET_LENGTH(u) PyUnicode_GET_LENGTH(u)
|
|
#define __Pyx_PyUnicode_READ_CHAR(u, i) PyUnicode_READ_CHAR(u, i)
|
|
#define __Pyx_PyUnicode_KIND(u) PyUnicode_KIND(u)
|
|
#define __Pyx_PyUnicode_DATA(u) PyUnicode_DATA(u)
|
|
#define __Pyx_PyUnicode_READ(k, d, i) PyUnicode_READ(k, d, i)
|
|
#else
|
|
#define CYTHON_PEP393_ENABLED 0
|
|
#define __Pyx_PyUnicode_READY(op) (0)
|
|
#define __Pyx_PyUnicode_GET_LENGTH(u) PyUnicode_GET_SIZE(u)
|
|
#define __Pyx_PyUnicode_READ_CHAR(u, i) ((Py_UCS4)(PyUnicode_AS_UNICODE(u)[i]))
|
|
#define __Pyx_PyUnicode_KIND(u) (sizeof(Py_UNICODE))
|
|
#define __Pyx_PyUnicode_DATA(u) ((void*)PyUnicode_AS_UNICODE(u))
|
|
#define __Pyx_PyUnicode_READ(k, d, i) ((void)(k), (Py_UCS4)(((Py_UNICODE*)d)[i]))
|
|
#endif
|
|
#if CYTHON_COMPILING_IN_PYPY
|
|
#define __Pyx_PyUnicode_Concat(a, b) PyNumber_Add(a, b)
|
|
#define __Pyx_PyUnicode_ConcatSafe(a, b) PyNumber_Add(a, b)
|
|
#else
|
|
#define __Pyx_PyUnicode_Concat(a, b) PyUnicode_Concat(a, b)
|
|
#define __Pyx_PyUnicode_ConcatSafe(a, b) ((unlikely((a) == Py_None) || unlikely((b) == Py_None)) ? \
|
|
PyNumber_Add(a, b) : __Pyx_PyUnicode_Concat(a, b))
|
|
#endif
|
|
#define __Pyx_PyString_FormatSafe(a, b) ((unlikely((a) == Py_None)) ? PyNumber_Remainder(a, b) : __Pyx_PyString_Format(a, b))
|
|
#define __Pyx_PyUnicode_FormatSafe(a, b) ((unlikely((a) == Py_None)) ? PyNumber_Remainder(a, b) : PyUnicode_Format(a, b))
|
|
#if PY_MAJOR_VERSION >= 3
|
|
#define __Pyx_PyString_Format(a, b) PyUnicode_Format(a, b)
|
|
#else
|
|
#define __Pyx_PyString_Format(a, b) PyString_Format(a, b)
|
|
#endif
|
|
#if PY_MAJOR_VERSION >= 3
|
|
#define PyBaseString_Type PyUnicode_Type
|
|
#define PyStringObject PyUnicodeObject
|
|
#define PyString_Type PyUnicode_Type
|
|
#define PyString_Check PyUnicode_Check
|
|
#define PyString_CheckExact PyUnicode_CheckExact
|
|
#endif
|
|
#if PY_VERSION_HEX < 0x02060000
|
|
#define PyBytesObject PyStringObject
|
|
#define PyBytes_Type PyString_Type
|
|
#define PyBytes_Check PyString_Check
|
|
#define PyBytes_CheckExact PyString_CheckExact
|
|
#define PyBytes_FromString PyString_FromString
|
|
#define PyBytes_FromStringAndSize PyString_FromStringAndSize
|
|
#define PyBytes_FromFormat PyString_FromFormat
|
|
#define PyBytes_DecodeEscape PyString_DecodeEscape
|
|
#define PyBytes_AsString PyString_AsString
|
|
#define PyBytes_AsStringAndSize PyString_AsStringAndSize
|
|
#define PyBytes_Size PyString_Size
|
|
#define PyBytes_AS_STRING PyString_AS_STRING
|
|
#define PyBytes_GET_SIZE PyString_GET_SIZE
|
|
#define PyBytes_Repr PyString_Repr
|
|
#define PyBytes_Concat PyString_Concat
|
|
#define PyBytes_ConcatAndDel PyString_ConcatAndDel
|
|
#endif
|
|
#if PY_MAJOR_VERSION >= 3
|
|
#define __Pyx_PyBaseString_Check(obj) PyUnicode_Check(obj)
|
|
#define __Pyx_PyBaseString_CheckExact(obj) PyUnicode_CheckExact(obj)
|
|
#else
|
|
#define __Pyx_PyBaseString_Check(obj) (PyString_CheckExact(obj) || PyUnicode_CheckExact(obj) || \
|
|
PyString_Check(obj) || PyUnicode_Check(obj))
|
|
#define __Pyx_PyBaseString_CheckExact(obj) (PyString_CheckExact(obj) || PyUnicode_CheckExact(obj))
|
|
#endif
|
|
#if PY_VERSION_HEX < 0x02060000
|
|
#define PySet_Check(obj) PyObject_TypeCheck(obj, &PySet_Type)
|
|
#define PyFrozenSet_Check(obj) PyObject_TypeCheck(obj, &PyFrozenSet_Type)
|
|
#endif
|
|
#ifndef PySet_CheckExact
|
|
#define PySet_CheckExact(obj) (Py_TYPE(obj) == &PySet_Type)
|
|
#endif
|
|
#define __Pyx_TypeCheck(obj, type) PyObject_TypeCheck(obj, (PyTypeObject *)type)
|
|
#if PY_MAJOR_VERSION >= 3
|
|
#define PyIntObject PyLongObject
|
|
#define PyInt_Type PyLong_Type
|
|
#define PyInt_Check(op) PyLong_Check(op)
|
|
#define PyInt_CheckExact(op) PyLong_CheckExact(op)
|
|
#define PyInt_FromString PyLong_FromString
|
|
#define PyInt_FromUnicode PyLong_FromUnicode
|
|
#define PyInt_FromLong PyLong_FromLong
|
|
#define PyInt_FromSize_t PyLong_FromSize_t
|
|
#define PyInt_FromSsize_t PyLong_FromSsize_t
|
|
#define PyInt_AsLong PyLong_AsLong
|
|
#define PyInt_AS_LONG PyLong_AS_LONG
|
|
#define PyInt_AsSsize_t PyLong_AsSsize_t
|
|
#define PyInt_AsUnsignedLongMask PyLong_AsUnsignedLongMask
|
|
#define PyInt_AsUnsignedLongLongMask PyLong_AsUnsignedLongLongMask
|
|
#define PyNumber_Int PyNumber_Long
|
|
#endif
|
|
#if PY_MAJOR_VERSION >= 3
|
|
#define PyBoolObject PyLongObject
|
|
#endif
|
|
#if PY_VERSION_HEX < 0x030200A4
|
|
typedef long Py_hash_t;
|
|
#define __Pyx_PyInt_FromHash_t PyInt_FromLong
|
|
#define __Pyx_PyInt_AsHash_t PyInt_AsLong
|
|
#else
|
|
#define __Pyx_PyInt_FromHash_t PyInt_FromSsize_t
|
|
#define __Pyx_PyInt_AsHash_t PyInt_AsSsize_t
|
|
#endif
|
|
#if (PY_MAJOR_VERSION < 3) || (PY_VERSION_HEX >= 0x03010300)
|
|
#define __Pyx_PySequence_GetSlice(obj, a, b) PySequence_GetSlice(obj, a, b)
|
|
#define __Pyx_PySequence_SetSlice(obj, a, b, value) PySequence_SetSlice(obj, a, b, value)
|
|
#define __Pyx_PySequence_DelSlice(obj, a, b) PySequence_DelSlice(obj, a, b)
|
|
#else
|
|
#define __Pyx_PySequence_GetSlice(obj, a, b) (unlikely(!(obj)) ? \
|
|
(PyErr_SetString(PyExc_SystemError, "null argument to internal routine"), (PyObject*)0) : \
|
|
(likely((obj)->ob_type->tp_as_mapping) ? (PySequence_GetSlice(obj, a, b)) : \
|
|
(PyErr_Format(PyExc_TypeError, "'%.200s' object is unsliceable", (obj)->ob_type->tp_name), (PyObject*)0)))
|
|
#define __Pyx_PySequence_SetSlice(obj, a, b, value) (unlikely(!(obj)) ? \
|
|
(PyErr_SetString(PyExc_SystemError, "null argument to internal routine"), -1) : \
|
|
(likely((obj)->ob_type->tp_as_mapping) ? (PySequence_SetSlice(obj, a, b, value)) : \
|
|
(PyErr_Format(PyExc_TypeError, "'%.200s' object doesn't support slice assignment", (obj)->ob_type->tp_name), -1)))
|
|
#define __Pyx_PySequence_DelSlice(obj, a, b) (unlikely(!(obj)) ? \
|
|
(PyErr_SetString(PyExc_SystemError, "null argument to internal routine"), -1) : \
|
|
(likely((obj)->ob_type->tp_as_mapping) ? (PySequence_DelSlice(obj, a, b)) : \
|
|
(PyErr_Format(PyExc_TypeError, "'%.200s' object doesn't support slice deletion", (obj)->ob_type->tp_name), -1)))
|
|
#endif
|
|
#if PY_MAJOR_VERSION >= 3
|
|
#define PyMethod_New(func, self, klass) ((self) ? PyMethod_New(func, self) : PyInstanceMethod_New(func))
|
|
#endif
|
|
#if PY_VERSION_HEX < 0x02050000
|
|
#define __Pyx_GetAttrString(o,n) PyObject_GetAttrString((o),((char *)(n)))
|
|
#define __Pyx_SetAttrString(o,n,a) PyObject_SetAttrString((o),((char *)(n)),(a))
|
|
#define __Pyx_DelAttrString(o,n) PyObject_DelAttrString((o),((char *)(n)))
|
|
#else
|
|
#define __Pyx_GetAttrString(o,n) PyObject_GetAttrString((o),(n))
|
|
#define __Pyx_SetAttrString(o,n,a) PyObject_SetAttrString((o),(n),(a))
|
|
#define __Pyx_DelAttrString(o,n) PyObject_DelAttrString((o),(n))
|
|
#endif
|
|
#if PY_VERSION_HEX < 0x02050000
|
|
#define __Pyx_NAMESTR(n) ((char *)(n))
|
|
#define __Pyx_DOCSTR(n) ((char *)(n))
|
|
#else
|
|
#define __Pyx_NAMESTR(n) (n)
|
|
#define __Pyx_DOCSTR(n) (n)
|
|
#endif
|
|
#ifndef CYTHON_INLINE
|
|
#if defined(__GNUC__)
|
|
#define CYTHON_INLINE __inline__
|
|
#elif defined(_MSC_VER)
|
|
#define CYTHON_INLINE __inline
|
|
#elif defined (__STDC_VERSION__) && __STDC_VERSION__ >= 199901L
|
|
#define CYTHON_INLINE inline
|
|
#else
|
|
#define CYTHON_INLINE
|
|
#endif
|
|
#endif
|
|
#ifndef CYTHON_RESTRICT
|
|
#if defined(__GNUC__)
|
|
#define CYTHON_RESTRICT __restrict__
|
|
#elif defined(_MSC_VER) && _MSC_VER >= 1400
|
|
#define CYTHON_RESTRICT __restrict
|
|
#elif defined (__STDC_VERSION__) && __STDC_VERSION__ >= 199901L
|
|
#define CYTHON_RESTRICT restrict
|
|
#else
|
|
#define CYTHON_RESTRICT
|
|
#endif
|
|
#endif
|
|
#ifdef NAN
|
|
#define __PYX_NAN() ((float) NAN)
|
|
#else
|
|
static CYTHON_INLINE float __PYX_NAN() {
|
|
/* Initialize NaN. The sign is irrelevant, an exponent with all bits 1 and
|
|
a nonzero mantissa means NaN. If the first bit in the mantissa is 1, it is
|
|
a quiet NaN. */
|
|
float value;
|
|
memset(&value, 0xFF, sizeof(value));
|
|
return value;
|
|
}
|
|
#endif
|
|
|
|
|
|
#if PY_MAJOR_VERSION >= 3
|
|
#define __Pyx_PyNumber_Divide(x,y) PyNumber_TrueDivide(x,y)
|
|
#define __Pyx_PyNumber_InPlaceDivide(x,y) PyNumber_InPlaceTrueDivide(x,y)
|
|
#else
|
|
#define __Pyx_PyNumber_Divide(x,y) PyNumber_Divide(x,y)
|
|
#define __Pyx_PyNumber_InPlaceDivide(x,y) PyNumber_InPlaceDivide(x,y)
|
|
#endif
|
|
|
|
#ifndef __PYX_EXTERN_C
|
|
#ifdef __cplusplus
|
|
#define __PYX_EXTERN_C extern "C"
|
|
#else
|
|
#define __PYX_EXTERN_C extern
|
|
#endif
|
|
#endif
|
|
|
|
#if defined(WIN32) || defined(MS_WINDOWS)
|
|
#define _USE_MATH_DEFINES
|
|
#endif
|
|
#include <math.h>
|
|
#define __PYX_HAVE__sklearn__svm__libsvm
|
|
#define __PYX_HAVE_API__sklearn__svm__libsvm
|
|
#include "string.h"
|
|
#include "stdio.h"
|
|
#include "stdlib.h"
|
|
#include "numpy/arrayobject.h"
|
|
#include "numpy/ufuncobject.h"
|
|
#include "svm.h"
|
|
#include "libsvm_helper.c"
|
|
#ifdef _OPENMP
|
|
#include <omp.h>
|
|
#endif /* _OPENMP */
|
|
|
|
#ifdef PYREX_WITHOUT_ASSERTIONS
|
|
#define CYTHON_WITHOUT_ASSERTIONS
|
|
#endif
|
|
|
|
#ifndef CYTHON_UNUSED
|
|
# if defined(__GNUC__)
|
|
# if !(defined(__cplusplus)) || (__GNUC__ > 3 || (__GNUC__ == 3 && __GNUC_MINOR__ >= 4))
|
|
# define CYTHON_UNUSED __attribute__ ((__unused__))
|
|
# else
|
|
# define CYTHON_UNUSED
|
|
# endif
|
|
# elif defined(__ICC) || (defined(__INTEL_COMPILER) && !defined(_MSC_VER))
|
|
# define CYTHON_UNUSED __attribute__ ((__unused__))
|
|
# else
|
|
# define CYTHON_UNUSED
|
|
# endif
|
|
#endif
|
|
typedef struct {PyObject **p; char *s; const Py_ssize_t n; const char* encoding;
|
|
const char is_unicode; const char is_str; const char intern; } __Pyx_StringTabEntry; /*proto*/
|
|
|
|
#define __PYX_DEFAULT_STRING_ENCODING_IS_ASCII 0
|
|
#define __PYX_DEFAULT_STRING_ENCODING_IS_DEFAULT 0
|
|
#define __PYX_DEFAULT_STRING_ENCODING ""
|
|
#define __Pyx_PyObject_FromString __Pyx_PyBytes_FromString
|
|
#define __Pyx_PyObject_FromStringAndSize __Pyx_PyBytes_FromStringAndSize
|
|
#define __Pyx_fits_Py_ssize_t(v, type, is_signed) ( \
|
|
(sizeof(type) < sizeof(Py_ssize_t)) || \
|
|
(sizeof(type) > sizeof(Py_ssize_t) && \
|
|
likely(v < (type)PY_SSIZE_T_MAX || \
|
|
v == (type)PY_SSIZE_T_MAX) && \
|
|
(!is_signed || likely(v > (type)PY_SSIZE_T_MIN || \
|
|
v == (type)PY_SSIZE_T_MIN))) || \
|
|
(sizeof(type) == sizeof(Py_ssize_t) && \
|
|
(is_signed || likely(v < (type)PY_SSIZE_T_MAX || \
|
|
v == (type)PY_SSIZE_T_MAX))) )
|
|
static CYTHON_INLINE char* __Pyx_PyObject_AsString(PyObject*);
|
|
static CYTHON_INLINE char* __Pyx_PyObject_AsStringAndSize(PyObject*, Py_ssize_t* length);
|
|
#define __Pyx_PyByteArray_FromString(s) PyByteArray_FromStringAndSize((const char*)s, strlen((const char*)s))
|
|
#define __Pyx_PyByteArray_FromStringAndSize(s, l) PyByteArray_FromStringAndSize((const char*)s, l)
|
|
#define __Pyx_PyBytes_FromString PyBytes_FromString
|
|
#define __Pyx_PyBytes_FromStringAndSize PyBytes_FromStringAndSize
|
|
static CYTHON_INLINE PyObject* __Pyx_PyUnicode_FromString(char*);
|
|
#if PY_MAJOR_VERSION < 3
|
|
#define __Pyx_PyStr_FromString __Pyx_PyBytes_FromString
|
|
#define __Pyx_PyStr_FromStringAndSize __Pyx_PyBytes_FromStringAndSize
|
|
#else
|
|
#define __Pyx_PyStr_FromString __Pyx_PyUnicode_FromString
|
|
#define __Pyx_PyStr_FromStringAndSize __Pyx_PyUnicode_FromStringAndSize
|
|
#endif
|
|
#define __Pyx_PyObject_AsSString(s) ((signed char*) __Pyx_PyObject_AsString(s))
|
|
#define __Pyx_PyObject_AsUString(s) ((unsigned char*) __Pyx_PyObject_AsString(s))
|
|
#define __Pyx_PyObject_FromUString(s) __Pyx_PyObject_FromString((char*)s)
|
|
#define __Pyx_PyBytes_FromUString(s) __Pyx_PyBytes_FromString((char*)s)
|
|
#define __Pyx_PyByteArray_FromUString(s) __Pyx_PyByteArray_FromString((char*)s)
|
|
#define __Pyx_PyStr_FromUString(s) __Pyx_PyStr_FromString((char*)s)
|
|
#define __Pyx_PyUnicode_FromUString(s) __Pyx_PyUnicode_FromString((char*)s)
|
|
#if PY_MAJOR_VERSION < 3
|
|
static CYTHON_INLINE size_t __Pyx_Py_UNICODE_strlen(const Py_UNICODE *u)
|
|
{
|
|
const Py_UNICODE *u_end = u;
|
|
while (*u_end++) ;
|
|
return u_end - u - 1;
|
|
}
|
|
#else
|
|
#define __Pyx_Py_UNICODE_strlen Py_UNICODE_strlen
|
|
#endif
|
|
#define __Pyx_PyUnicode_FromUnicode(u) PyUnicode_FromUnicode(u, __Pyx_Py_UNICODE_strlen(u))
|
|
#define __Pyx_PyUnicode_FromUnicodeAndLength PyUnicode_FromUnicode
|
|
#define __Pyx_PyUnicode_AsUnicode PyUnicode_AsUnicode
|
|
#define __Pyx_Owned_Py_None(b) (Py_INCREF(Py_None), Py_None)
|
|
#define __Pyx_PyBool_FromLong(b) ((b) ? (Py_INCREF(Py_True), Py_True) : (Py_INCREF(Py_False), Py_False))
|
|
static CYTHON_INLINE int __Pyx_PyObject_IsTrue(PyObject*);
|
|
static CYTHON_INLINE PyObject* __Pyx_PyNumber_Int(PyObject* x);
|
|
static CYTHON_INLINE Py_ssize_t __Pyx_PyIndex_AsSsize_t(PyObject*);
|
|
static CYTHON_INLINE PyObject * __Pyx_PyInt_FromSize_t(size_t);
|
|
#if CYTHON_COMPILING_IN_CPYTHON
|
|
#define __pyx_PyFloat_AsDouble(x) (PyFloat_CheckExact(x) ? PyFloat_AS_DOUBLE(x) : PyFloat_AsDouble(x))
|
|
#else
|
|
#define __pyx_PyFloat_AsDouble(x) PyFloat_AsDouble(x)
|
|
#endif
|
|
#define __pyx_PyFloat_AsFloat(x) ((float) __pyx_PyFloat_AsDouble(x))
|
|
#if PY_MAJOR_VERSION < 3 && __PYX_DEFAULT_STRING_ENCODING_IS_ASCII
|
|
static int __Pyx_sys_getdefaultencoding_not_ascii;
|
|
static int __Pyx_init_sys_getdefaultencoding_params(void) {
|
|
PyObject* sys = NULL;
|
|
PyObject* default_encoding = NULL;
|
|
PyObject* ascii_chars_u = NULL;
|
|
PyObject* ascii_chars_b = NULL;
|
|
sys = PyImport_ImportModule("sys");
|
|
if (sys == NULL) goto bad;
|
|
default_encoding = PyObject_CallMethod(sys, (char*) (const char*) "getdefaultencoding", NULL);
|
|
if (default_encoding == NULL) goto bad;
|
|
if (strcmp(PyBytes_AsString(default_encoding), "ascii") == 0) {
|
|
__Pyx_sys_getdefaultencoding_not_ascii = 0;
|
|
} else {
|
|
const char* default_encoding_c = PyBytes_AS_STRING(default_encoding);
|
|
char ascii_chars[128];
|
|
int c;
|
|
for (c = 0; c < 128; c++) {
|
|
ascii_chars[c] = c;
|
|
}
|
|
__Pyx_sys_getdefaultencoding_not_ascii = 1;
|
|
ascii_chars_u = PyUnicode_DecodeASCII(ascii_chars, 128, NULL);
|
|
if (ascii_chars_u == NULL) goto bad;
|
|
ascii_chars_b = PyUnicode_AsEncodedString(ascii_chars_u, default_encoding_c, NULL);
|
|
if (ascii_chars_b == NULL || strncmp(ascii_chars, PyBytes_AS_STRING(ascii_chars_b), 128) != 0) {
|
|
PyErr_Format(
|
|
PyExc_ValueError,
|
|
"This module compiled with c_string_encoding=ascii, but default encoding '%.200s' is not a superset of ascii.",
|
|
default_encoding_c);
|
|
goto bad;
|
|
}
|
|
}
|
|
Py_XDECREF(sys);
|
|
Py_XDECREF(default_encoding);
|
|
Py_XDECREF(ascii_chars_u);
|
|
Py_XDECREF(ascii_chars_b);
|
|
return 0;
|
|
bad:
|
|
Py_XDECREF(sys);
|
|
Py_XDECREF(default_encoding);
|
|
Py_XDECREF(ascii_chars_u);
|
|
Py_XDECREF(ascii_chars_b);
|
|
return -1;
|
|
}
|
|
#endif
|
|
#if __PYX_DEFAULT_STRING_ENCODING_IS_DEFAULT && PY_MAJOR_VERSION >= 3
|
|
#define __Pyx_PyUnicode_FromStringAndSize(c_str, size) PyUnicode_DecodeUTF8(c_str, size, NULL)
|
|
#else
|
|
#define __Pyx_PyUnicode_FromStringAndSize(c_str, size) PyUnicode_Decode(c_str, size, __PYX_DEFAULT_STRING_ENCODING, NULL)
|
|
#if __PYX_DEFAULT_STRING_ENCODING_IS_DEFAULT
|
|
static char* __PYX_DEFAULT_STRING_ENCODING;
|
|
static int __Pyx_init_sys_getdefaultencoding_params(void) {
|
|
PyObject* sys = NULL;
|
|
PyObject* default_encoding = NULL;
|
|
char* default_encoding_c;
|
|
sys = PyImport_ImportModule("sys");
|
|
if (sys == NULL) goto bad;
|
|
default_encoding = PyObject_CallMethod(sys, (char*) (const char*) "getdefaultencoding", NULL);
|
|
if (default_encoding == NULL) goto bad;
|
|
default_encoding_c = PyBytes_AS_STRING(default_encoding);
|
|
__PYX_DEFAULT_STRING_ENCODING = (char*) malloc(strlen(default_encoding_c));
|
|
strcpy(__PYX_DEFAULT_STRING_ENCODING, default_encoding_c);
|
|
Py_DECREF(sys);
|
|
Py_DECREF(default_encoding);
|
|
return 0;
|
|
bad:
|
|
Py_XDECREF(sys);
|
|
Py_XDECREF(default_encoding);
|
|
return -1;
|
|
}
|
|
#endif
|
|
#endif
|
|
|
|
|
|
#ifdef __GNUC__
|
|
/* Test for GCC > 2.95 */
|
|
#if __GNUC__ > 2 || (__GNUC__ == 2 && (__GNUC_MINOR__ > 95))
|
|
#define likely(x) __builtin_expect(!!(x), 1)
|
|
#define unlikely(x) __builtin_expect(!!(x), 0)
|
|
#else /* __GNUC__ > 2 ... */
|
|
#define likely(x) (x)
|
|
#define unlikely(x) (x)
|
|
#endif /* __GNUC__ > 2 ... */
|
|
#else /* __GNUC__ */
|
|
#define likely(x) (x)
|
|
#define unlikely(x) (x)
|
|
#endif /* __GNUC__ */
|
|
|
|
static PyObject *__pyx_m;
|
|
static PyObject *__pyx_d;
|
|
static PyObject *__pyx_b;
|
|
static PyObject *__pyx_empty_tuple;
|
|
static PyObject *__pyx_empty_bytes;
|
|
static int __pyx_lineno;
|
|
static int __pyx_clineno = 0;
|
|
static const char * __pyx_cfilenm= __FILE__;
|
|
static const char *__pyx_filename;
|
|
|
|
#if !defined(CYTHON_CCOMPLEX)
|
|
#if defined(__cplusplus)
|
|
#define CYTHON_CCOMPLEX 1
|
|
#elif defined(_Complex_I)
|
|
#define CYTHON_CCOMPLEX 1
|
|
#else
|
|
#define CYTHON_CCOMPLEX 0
|
|
#endif
|
|
#endif
|
|
#if CYTHON_CCOMPLEX
|
|
#ifdef __cplusplus
|
|
#include <complex>
|
|
#else
|
|
#include <complex.h>
|
|
#endif
|
|
#endif
|
|
#if CYTHON_CCOMPLEX && !defined(__cplusplus) && defined(__sun__) && defined(__GNUC__)
|
|
#undef _Complex_I
|
|
#define _Complex_I 1.0fj
|
|
#endif
|
|
|
|
|
|
static const char *__pyx_f[] = {
|
|
"libsvm.pyx",
|
|
"__init__.pxd",
|
|
"type.pxd",
|
|
};
|
|
#define IS_UNSIGNED(type) (((type) -1) > 0)
|
|
struct __Pyx_StructField_;
|
|
#define __PYX_BUF_FLAGS_PACKED_STRUCT (1 << 0)
|
|
typedef struct {
|
|
const char* name; /* for error messages only */
|
|
struct __Pyx_StructField_* fields;
|
|
size_t size; /* sizeof(type) */
|
|
size_t arraysize[8]; /* length of array in each dimension */
|
|
int ndim;
|
|
char typegroup; /* _R_eal, _C_omplex, Signed _I_nt, _U_nsigned int, _S_truct, _P_ointer, _O_bject, c_H_ar */
|
|
char is_unsigned;
|
|
int flags;
|
|
} __Pyx_TypeInfo;
|
|
typedef struct __Pyx_StructField_ {
|
|
__Pyx_TypeInfo* type;
|
|
const char* name;
|
|
size_t offset;
|
|
} __Pyx_StructField;
|
|
typedef struct {
|
|
__Pyx_StructField* field;
|
|
size_t parent_offset;
|
|
} __Pyx_BufFmt_StackElem;
|
|
typedef struct {
|
|
__Pyx_StructField root;
|
|
__Pyx_BufFmt_StackElem* head;
|
|
size_t fmt_offset;
|
|
size_t new_count, enc_count;
|
|
size_t struct_alignment;
|
|
int is_complex;
|
|
char enc_type;
|
|
char new_packmode;
|
|
char enc_packmode;
|
|
char is_valid_array;
|
|
} __Pyx_BufFmt_Context;
|
|
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":723
|
|
* # in Cython to enable them only on the right systems.
|
|
*
|
|
* ctypedef npy_int8 int8_t # <<<<<<<<<<<<<<
|
|
* ctypedef npy_int16 int16_t
|
|
* ctypedef npy_int32 int32_t
|
|
*/
|
|
typedef npy_int8 __pyx_t_5numpy_int8_t;
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":724
|
|
*
|
|
* ctypedef npy_int8 int8_t
|
|
* ctypedef npy_int16 int16_t # <<<<<<<<<<<<<<
|
|
* ctypedef npy_int32 int32_t
|
|
* ctypedef npy_int64 int64_t
|
|
*/
|
|
typedef npy_int16 __pyx_t_5numpy_int16_t;
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":725
|
|
* ctypedef npy_int8 int8_t
|
|
* ctypedef npy_int16 int16_t
|
|
* ctypedef npy_int32 int32_t # <<<<<<<<<<<<<<
|
|
* ctypedef npy_int64 int64_t
|
|
* #ctypedef npy_int96 int96_t
|
|
*/
|
|
typedef npy_int32 __pyx_t_5numpy_int32_t;
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":726
|
|
* ctypedef npy_int16 int16_t
|
|
* ctypedef npy_int32 int32_t
|
|
* ctypedef npy_int64 int64_t # <<<<<<<<<<<<<<
|
|
* #ctypedef npy_int96 int96_t
|
|
* #ctypedef npy_int128 int128_t
|
|
*/
|
|
typedef npy_int64 __pyx_t_5numpy_int64_t;
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":730
|
|
* #ctypedef npy_int128 int128_t
|
|
*
|
|
* ctypedef npy_uint8 uint8_t # <<<<<<<<<<<<<<
|
|
* ctypedef npy_uint16 uint16_t
|
|
* ctypedef npy_uint32 uint32_t
|
|
*/
|
|
typedef npy_uint8 __pyx_t_5numpy_uint8_t;
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":731
|
|
*
|
|
* ctypedef npy_uint8 uint8_t
|
|
* ctypedef npy_uint16 uint16_t # <<<<<<<<<<<<<<
|
|
* ctypedef npy_uint32 uint32_t
|
|
* ctypedef npy_uint64 uint64_t
|
|
*/
|
|
typedef npy_uint16 __pyx_t_5numpy_uint16_t;
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":732
|
|
* ctypedef npy_uint8 uint8_t
|
|
* ctypedef npy_uint16 uint16_t
|
|
* ctypedef npy_uint32 uint32_t # <<<<<<<<<<<<<<
|
|
* ctypedef npy_uint64 uint64_t
|
|
* #ctypedef npy_uint96 uint96_t
|
|
*/
|
|
typedef npy_uint32 __pyx_t_5numpy_uint32_t;
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":733
|
|
* ctypedef npy_uint16 uint16_t
|
|
* ctypedef npy_uint32 uint32_t
|
|
* ctypedef npy_uint64 uint64_t # <<<<<<<<<<<<<<
|
|
* #ctypedef npy_uint96 uint96_t
|
|
* #ctypedef npy_uint128 uint128_t
|
|
*/
|
|
typedef npy_uint64 __pyx_t_5numpy_uint64_t;
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":737
|
|
* #ctypedef npy_uint128 uint128_t
|
|
*
|
|
* ctypedef npy_float32 float32_t # <<<<<<<<<<<<<<
|
|
* ctypedef npy_float64 float64_t
|
|
* #ctypedef npy_float80 float80_t
|
|
*/
|
|
typedef npy_float32 __pyx_t_5numpy_float32_t;
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":738
|
|
*
|
|
* ctypedef npy_float32 float32_t
|
|
* ctypedef npy_float64 float64_t # <<<<<<<<<<<<<<
|
|
* #ctypedef npy_float80 float80_t
|
|
* #ctypedef npy_float128 float128_t
|
|
*/
|
|
typedef npy_float64 __pyx_t_5numpy_float64_t;
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":747
|
|
* # The int types are mapped a bit surprising --
|
|
* # numpy.int corresponds to 'l' and numpy.long to 'q'
|
|
* ctypedef npy_long int_t # <<<<<<<<<<<<<<
|
|
* ctypedef npy_longlong long_t
|
|
* ctypedef npy_longlong longlong_t
|
|
*/
|
|
typedef npy_long __pyx_t_5numpy_int_t;
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":748
|
|
* # numpy.int corresponds to 'l' and numpy.long to 'q'
|
|
* ctypedef npy_long int_t
|
|
* ctypedef npy_longlong long_t # <<<<<<<<<<<<<<
|
|
* ctypedef npy_longlong longlong_t
|
|
*
|
|
*/
|
|
typedef npy_longlong __pyx_t_5numpy_long_t;
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":749
|
|
* ctypedef npy_long int_t
|
|
* ctypedef npy_longlong long_t
|
|
* ctypedef npy_longlong longlong_t # <<<<<<<<<<<<<<
|
|
*
|
|
* ctypedef npy_ulong uint_t
|
|
*/
|
|
typedef npy_longlong __pyx_t_5numpy_longlong_t;
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":751
|
|
* ctypedef npy_longlong longlong_t
|
|
*
|
|
* ctypedef npy_ulong uint_t # <<<<<<<<<<<<<<
|
|
* ctypedef npy_ulonglong ulong_t
|
|
* ctypedef npy_ulonglong ulonglong_t
|
|
*/
|
|
typedef npy_ulong __pyx_t_5numpy_uint_t;
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":752
|
|
*
|
|
* ctypedef npy_ulong uint_t
|
|
* ctypedef npy_ulonglong ulong_t # <<<<<<<<<<<<<<
|
|
* ctypedef npy_ulonglong ulonglong_t
|
|
*
|
|
*/
|
|
typedef npy_ulonglong __pyx_t_5numpy_ulong_t;
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":753
|
|
* ctypedef npy_ulong uint_t
|
|
* ctypedef npy_ulonglong ulong_t
|
|
* ctypedef npy_ulonglong ulonglong_t # <<<<<<<<<<<<<<
|
|
*
|
|
* ctypedef npy_intp intp_t
|
|
*/
|
|
typedef npy_ulonglong __pyx_t_5numpy_ulonglong_t;
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":755
|
|
* ctypedef npy_ulonglong ulonglong_t
|
|
*
|
|
* ctypedef npy_intp intp_t # <<<<<<<<<<<<<<
|
|
* ctypedef npy_uintp uintp_t
|
|
*
|
|
*/
|
|
typedef npy_intp __pyx_t_5numpy_intp_t;
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":756
|
|
*
|
|
* ctypedef npy_intp intp_t
|
|
* ctypedef npy_uintp uintp_t # <<<<<<<<<<<<<<
|
|
*
|
|
* ctypedef npy_double float_t
|
|
*/
|
|
typedef npy_uintp __pyx_t_5numpy_uintp_t;
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":758
|
|
* ctypedef npy_uintp uintp_t
|
|
*
|
|
* ctypedef npy_double float_t # <<<<<<<<<<<<<<
|
|
* ctypedef npy_double double_t
|
|
* ctypedef npy_longdouble longdouble_t
|
|
*/
|
|
typedef npy_double __pyx_t_5numpy_float_t;
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":759
|
|
*
|
|
* ctypedef npy_double float_t
|
|
* ctypedef npy_double double_t # <<<<<<<<<<<<<<
|
|
* ctypedef npy_longdouble longdouble_t
|
|
*
|
|
*/
|
|
typedef npy_double __pyx_t_5numpy_double_t;
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":760
|
|
* ctypedef npy_double float_t
|
|
* ctypedef npy_double double_t
|
|
* ctypedef npy_longdouble longdouble_t # <<<<<<<<<<<<<<
|
|
*
|
|
* ctypedef npy_cfloat cfloat_t
|
|
*/
|
|
typedef npy_longdouble __pyx_t_5numpy_longdouble_t;
|
|
#if CYTHON_CCOMPLEX
|
|
#ifdef __cplusplus
|
|
typedef ::std::complex< float > __pyx_t_float_complex;
|
|
#else
|
|
typedef float _Complex __pyx_t_float_complex;
|
|
#endif
|
|
#else
|
|
typedef struct { float real, imag; } __pyx_t_float_complex;
|
|
#endif
|
|
|
|
#if CYTHON_CCOMPLEX
|
|
#ifdef __cplusplus
|
|
typedef ::std::complex< double > __pyx_t_double_complex;
|
|
#else
|
|
typedef double _Complex __pyx_t_double_complex;
|
|
#endif
|
|
#else
|
|
typedef struct { double real, imag; } __pyx_t_double_complex;
|
|
#endif
|
|
|
|
|
|
/*--- Type declarations ---*/
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":762
|
|
* ctypedef npy_longdouble longdouble_t
|
|
*
|
|
* ctypedef npy_cfloat cfloat_t # <<<<<<<<<<<<<<
|
|
* ctypedef npy_cdouble cdouble_t
|
|
* ctypedef npy_clongdouble clongdouble_t
|
|
*/
|
|
typedef npy_cfloat __pyx_t_5numpy_cfloat_t;
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":763
|
|
*
|
|
* ctypedef npy_cfloat cfloat_t
|
|
* ctypedef npy_cdouble cdouble_t # <<<<<<<<<<<<<<
|
|
* ctypedef npy_clongdouble clongdouble_t
|
|
*
|
|
*/
|
|
typedef npy_cdouble __pyx_t_5numpy_cdouble_t;
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":764
|
|
* ctypedef npy_cfloat cfloat_t
|
|
* ctypedef npy_cdouble cdouble_t
|
|
* ctypedef npy_clongdouble clongdouble_t # <<<<<<<<<<<<<<
|
|
*
|
|
* ctypedef npy_cdouble complex_t
|
|
*/
|
|
typedef npy_clongdouble __pyx_t_5numpy_clongdouble_t;
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":766
|
|
* ctypedef npy_clongdouble clongdouble_t
|
|
*
|
|
* ctypedef npy_cdouble complex_t # <<<<<<<<<<<<<<
|
|
*
|
|
* cdef inline object PyArray_MultiIterNew1(a):
|
|
*/
|
|
typedef npy_cdouble __pyx_t_5numpy_complex_t;
|
|
#ifndef CYTHON_REFNANNY
|
|
#define CYTHON_REFNANNY 0
|
|
#endif
|
|
#if CYTHON_REFNANNY
|
|
typedef struct {
|
|
void (*INCREF)(void*, PyObject*, int);
|
|
void (*DECREF)(void*, PyObject*, int);
|
|
void (*GOTREF)(void*, PyObject*, int);
|
|
void (*GIVEREF)(void*, PyObject*, int);
|
|
void* (*SetupContext)(const char*, int, const char*);
|
|
void (*FinishContext)(void**);
|
|
} __Pyx_RefNannyAPIStruct;
|
|
static __Pyx_RefNannyAPIStruct *__Pyx_RefNanny = NULL;
|
|
static __Pyx_RefNannyAPIStruct *__Pyx_RefNannyImportAPI(const char *modname); /*proto*/
|
|
#define __Pyx_RefNannyDeclarations void *__pyx_refnanny = NULL;
|
|
#ifdef WITH_THREAD
|
|
#define __Pyx_RefNannySetupContext(name, acquire_gil) \
|
|
if (acquire_gil) { \
|
|
PyGILState_STATE __pyx_gilstate_save = PyGILState_Ensure(); \
|
|
__pyx_refnanny = __Pyx_RefNanny->SetupContext((name), __LINE__, __FILE__); \
|
|
PyGILState_Release(__pyx_gilstate_save); \
|
|
} else { \
|
|
__pyx_refnanny = __Pyx_RefNanny->SetupContext((name), __LINE__, __FILE__); \
|
|
}
|
|
#else
|
|
#define __Pyx_RefNannySetupContext(name, acquire_gil) \
|
|
__pyx_refnanny = __Pyx_RefNanny->SetupContext((name), __LINE__, __FILE__)
|
|
#endif
|
|
#define __Pyx_RefNannyFinishContext() \
|
|
__Pyx_RefNanny->FinishContext(&__pyx_refnanny)
|
|
#define __Pyx_INCREF(r) __Pyx_RefNanny->INCREF(__pyx_refnanny, (PyObject *)(r), __LINE__)
|
|
#define __Pyx_DECREF(r) __Pyx_RefNanny->DECREF(__pyx_refnanny, (PyObject *)(r), __LINE__)
|
|
#define __Pyx_GOTREF(r) __Pyx_RefNanny->GOTREF(__pyx_refnanny, (PyObject *)(r), __LINE__)
|
|
#define __Pyx_GIVEREF(r) __Pyx_RefNanny->GIVEREF(__pyx_refnanny, (PyObject *)(r), __LINE__)
|
|
#define __Pyx_XINCREF(r) do { if((r) != NULL) {__Pyx_INCREF(r); }} while(0)
|
|
#define __Pyx_XDECREF(r) do { if((r) != NULL) {__Pyx_DECREF(r); }} while(0)
|
|
#define __Pyx_XGOTREF(r) do { if((r) != NULL) {__Pyx_GOTREF(r); }} while(0)
|
|
#define __Pyx_XGIVEREF(r) do { if((r) != NULL) {__Pyx_GIVEREF(r);}} while(0)
|
|
#else
|
|
#define __Pyx_RefNannyDeclarations
|
|
#define __Pyx_RefNannySetupContext(name, acquire_gil)
|
|
#define __Pyx_RefNannyFinishContext()
|
|
#define __Pyx_INCREF(r) Py_INCREF(r)
|
|
#define __Pyx_DECREF(r) Py_DECREF(r)
|
|
#define __Pyx_GOTREF(r)
|
|
#define __Pyx_GIVEREF(r)
|
|
#define __Pyx_XINCREF(r) Py_XINCREF(r)
|
|
#define __Pyx_XDECREF(r) Py_XDECREF(r)
|
|
#define __Pyx_XGOTREF(r)
|
|
#define __Pyx_XGIVEREF(r)
|
|
#endif /* CYTHON_REFNANNY */
|
|
#define __Pyx_XDECREF_SET(r, v) do { \
|
|
PyObject *tmp = (PyObject *) r; \
|
|
r = v; __Pyx_XDECREF(tmp); \
|
|
} while (0)
|
|
#define __Pyx_DECREF_SET(r, v) do { \
|
|
PyObject *tmp = (PyObject *) r; \
|
|
r = v; __Pyx_DECREF(tmp); \
|
|
} while (0)
|
|
#define __Pyx_CLEAR(r) do { PyObject* tmp = ((PyObject*)(r)); r = NULL; __Pyx_DECREF(tmp);} while(0)
|
|
#define __Pyx_XCLEAR(r) do { if((r) != NULL) {PyObject* tmp = ((PyObject*)(r)); r = NULL; __Pyx_DECREF(tmp);}} while(0)
|
|
|
|
#if CYTHON_COMPILING_IN_CPYTHON
|
|
static CYTHON_INLINE PyObject* __Pyx_PyObject_GetAttrStr(PyObject* obj, PyObject* attr_name) {
|
|
PyTypeObject* tp = Py_TYPE(obj);
|
|
if (likely(tp->tp_getattro))
|
|
return tp->tp_getattro(obj, attr_name);
|
|
#if PY_MAJOR_VERSION < 3
|
|
if (likely(tp->tp_getattr))
|
|
return tp->tp_getattr(obj, PyString_AS_STRING(attr_name));
|
|
#endif
|
|
return PyObject_GetAttr(obj, attr_name);
|
|
}
|
|
#else
|
|
#define __Pyx_PyObject_GetAttrStr(o,n) PyObject_GetAttr(o,n)
|
|
#endif
|
|
|
|
static PyObject *__Pyx_GetBuiltinName(PyObject *name); /*proto*/
|
|
|
|
static void __Pyx_RaiseArgtupleInvalid(const char* func_name, int exact,
|
|
Py_ssize_t num_min, Py_ssize_t num_max, Py_ssize_t num_found); /*proto*/
|
|
|
|
static void __Pyx_RaiseDoubleKeywordsError(const char* func_name, PyObject* kw_name); /*proto*/
|
|
|
|
static int __Pyx_ParseOptionalKeywords(PyObject *kwds, PyObject **argnames[], \
|
|
PyObject *kwds2, PyObject *values[], Py_ssize_t num_pos_args, \
|
|
const char* function_name); /*proto*/
|
|
|
|
static CYTHON_INLINE int __Pyx_ArgTypeTest(PyObject *obj, PyTypeObject *type, int none_allowed,
|
|
const char *name, int exact); /*proto*/
|
|
|
|
static CYTHON_INLINE int __Pyx_GetBufferAndValidate(Py_buffer* buf, PyObject* obj,
|
|
__Pyx_TypeInfo* dtype, int flags, int nd, int cast, __Pyx_BufFmt_StackElem* stack);
|
|
static CYTHON_INLINE void __Pyx_SafeReleaseBuffer(Py_buffer* info);
|
|
|
|
static CYTHON_INLINE PyObject *__Pyx_GetModuleGlobalName(PyObject *name); /*proto*/
|
|
|
|
#if CYTHON_COMPILING_IN_CPYTHON
|
|
static CYTHON_INLINE PyObject* __Pyx_PyObject_Call(PyObject *func, PyObject *arg, PyObject *kw); /*proto*/
|
|
#else
|
|
#define __Pyx_PyObject_Call(func, arg, kw) PyObject_Call(func, arg, kw)
|
|
#endif
|
|
|
|
static CYTHON_INLINE int __Pyx_TypeTest(PyObject *obj, PyTypeObject *type); /*proto*/
|
|
|
|
static void __Pyx_RaiseBufferFallbackError(void); /*proto*/
|
|
|
|
static CYTHON_INLINE void __Pyx_ErrRestore(PyObject *type, PyObject *value, PyObject *tb); /*proto*/
|
|
static CYTHON_INLINE void __Pyx_ErrFetch(PyObject **type, PyObject **value, PyObject **tb); /*proto*/
|
|
|
|
static void __Pyx_Raise(PyObject *type, PyObject *value, PyObject *tb, PyObject *cause); /*proto*/
|
|
|
|
#include <string.h>
|
|
|
|
static CYTHON_INLINE PyObject* __Pyx_decode_c_string(
|
|
const char* cstring, Py_ssize_t start, Py_ssize_t stop,
|
|
const char* encoding, const char* errors,
|
|
PyObject* (*decode_func)(const char *s, Py_ssize_t size, const char *errors));
|
|
|
|
static int __Pyx_GetException(PyObject **type, PyObject **value, PyObject **tb); /*proto*/
|
|
|
|
static CYTHON_INLINE void __Pyx_ExceptionSwap(PyObject **type, PyObject **value, PyObject **tb); /*proto*/
|
|
|
|
static CYTHON_INLINE void __Pyx_ExceptionSave(PyObject **type, PyObject **value, PyObject **tb); /*proto*/
|
|
static void __Pyx_ExceptionReset(PyObject *type, PyObject *value, PyObject *tb); /*proto*/
|
|
|
|
static CYTHON_INLINE long __Pyx_div_long(long, long); /* proto */
|
|
|
|
static CYTHON_INLINE void __Pyx_RaiseTooManyValuesError(Py_ssize_t expected);
|
|
|
|
static CYTHON_INLINE void __Pyx_RaiseNeedMoreValuesError(Py_ssize_t index);
|
|
|
|
static CYTHON_INLINE void __Pyx_RaiseNoneNotIterableError(void);
|
|
|
|
typedef struct {
|
|
Py_ssize_t shape, strides, suboffsets;
|
|
} __Pyx_Buf_DimInfo;
|
|
typedef struct {
|
|
size_t refcount;
|
|
Py_buffer pybuffer;
|
|
} __Pyx_Buffer;
|
|
typedef struct {
|
|
__Pyx_Buffer *rcbuffer;
|
|
char *data;
|
|
__Pyx_Buf_DimInfo diminfo[8];
|
|
} __Pyx_LocalBuf_ND;
|
|
|
|
#if PY_MAJOR_VERSION < 3
|
|
static int __Pyx_GetBuffer(PyObject *obj, Py_buffer *view, int flags);
|
|
static void __Pyx_ReleaseBuffer(Py_buffer *view);
|
|
#else
|
|
#define __Pyx_GetBuffer PyObject_GetBuffer
|
|
#define __Pyx_ReleaseBuffer PyBuffer_Release
|
|
#endif
|
|
|
|
|
|
static Py_ssize_t __Pyx_zeros[] = {0, 0, 0, 0, 0, 0, 0, 0};
|
|
static Py_ssize_t __Pyx_minusones[] = {-1, -1, -1, -1, -1, -1, -1, -1};
|
|
|
|
static PyObject *__Pyx_Import(PyObject *name, PyObject *from_list, int level); /*proto*/
|
|
|
|
static CYTHON_INLINE int __Pyx_PyInt_As_int(PyObject *);
|
|
|
|
static CYTHON_INLINE PyObject* __Pyx_PyInt_From_Py_intptr_t(Py_intptr_t value);
|
|
|
|
#ifndef __PYX_FORCE_INIT_THREADS
|
|
#define __PYX_FORCE_INIT_THREADS 0
|
|
#endif
|
|
|
|
static CYTHON_INLINE PyObject* __Pyx_PyInt_From_int(int value);
|
|
|
|
#if CYTHON_CCOMPLEX
|
|
#ifdef __cplusplus
|
|
#define __Pyx_CREAL(z) ((z).real())
|
|
#define __Pyx_CIMAG(z) ((z).imag())
|
|
#else
|
|
#define __Pyx_CREAL(z) (__real__(z))
|
|
#define __Pyx_CIMAG(z) (__imag__(z))
|
|
#endif
|
|
#else
|
|
#define __Pyx_CREAL(z) ((z).real)
|
|
#define __Pyx_CIMAG(z) ((z).imag)
|
|
#endif
|
|
#if (defined(_WIN32) || defined(__clang__)) && defined(__cplusplus) && CYTHON_CCOMPLEX
|
|
#define __Pyx_SET_CREAL(z,x) ((z).real(x))
|
|
#define __Pyx_SET_CIMAG(z,y) ((z).imag(y))
|
|
#else
|
|
#define __Pyx_SET_CREAL(z,x) __Pyx_CREAL(z) = (x)
|
|
#define __Pyx_SET_CIMAG(z,y) __Pyx_CIMAG(z) = (y)
|
|
#endif
|
|
|
|
static CYTHON_INLINE __pyx_t_float_complex __pyx_t_float_complex_from_parts(float, float);
|
|
|
|
#if CYTHON_CCOMPLEX
|
|
#define __Pyx_c_eqf(a, b) ((a)==(b))
|
|
#define __Pyx_c_sumf(a, b) ((a)+(b))
|
|
#define __Pyx_c_difff(a, b) ((a)-(b))
|
|
#define __Pyx_c_prodf(a, b) ((a)*(b))
|
|
#define __Pyx_c_quotf(a, b) ((a)/(b))
|
|
#define __Pyx_c_negf(a) (-(a))
|
|
#ifdef __cplusplus
|
|
#define __Pyx_c_is_zerof(z) ((z)==(float)0)
|
|
#define __Pyx_c_conjf(z) (::std::conj(z))
|
|
#if 1
|
|
#define __Pyx_c_absf(z) (::std::abs(z))
|
|
#define __Pyx_c_powf(a, b) (::std::pow(a, b))
|
|
#endif
|
|
#else
|
|
#define __Pyx_c_is_zerof(z) ((z)==0)
|
|
#define __Pyx_c_conjf(z) (conjf(z))
|
|
#if 1
|
|
#define __Pyx_c_absf(z) (cabsf(z))
|
|
#define __Pyx_c_powf(a, b) (cpowf(a, b))
|
|
#endif
|
|
#endif
|
|
#else
|
|
static CYTHON_INLINE int __Pyx_c_eqf(__pyx_t_float_complex, __pyx_t_float_complex);
|
|
static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_sumf(__pyx_t_float_complex, __pyx_t_float_complex);
|
|
static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_difff(__pyx_t_float_complex, __pyx_t_float_complex);
|
|
static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_prodf(__pyx_t_float_complex, __pyx_t_float_complex);
|
|
static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_quotf(__pyx_t_float_complex, __pyx_t_float_complex);
|
|
static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_negf(__pyx_t_float_complex);
|
|
static CYTHON_INLINE int __Pyx_c_is_zerof(__pyx_t_float_complex);
|
|
static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_conjf(__pyx_t_float_complex);
|
|
#if 1
|
|
static CYTHON_INLINE float __Pyx_c_absf(__pyx_t_float_complex);
|
|
static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_powf(__pyx_t_float_complex, __pyx_t_float_complex);
|
|
#endif
|
|
#endif
|
|
|
|
static CYTHON_INLINE __pyx_t_double_complex __pyx_t_double_complex_from_parts(double, double);
|
|
|
|
#if CYTHON_CCOMPLEX
|
|
#define __Pyx_c_eq(a, b) ((a)==(b))
|
|
#define __Pyx_c_sum(a, b) ((a)+(b))
|
|
#define __Pyx_c_diff(a, b) ((a)-(b))
|
|
#define __Pyx_c_prod(a, b) ((a)*(b))
|
|
#define __Pyx_c_quot(a, b) ((a)/(b))
|
|
#define __Pyx_c_neg(a) (-(a))
|
|
#ifdef __cplusplus
|
|
#define __Pyx_c_is_zero(z) ((z)==(double)0)
|
|
#define __Pyx_c_conj(z) (::std::conj(z))
|
|
#if 1
|
|
#define __Pyx_c_abs(z) (::std::abs(z))
|
|
#define __Pyx_c_pow(a, b) (::std::pow(a, b))
|
|
#endif
|
|
#else
|
|
#define __Pyx_c_is_zero(z) ((z)==0)
|
|
#define __Pyx_c_conj(z) (conj(z))
|
|
#if 1
|
|
#define __Pyx_c_abs(z) (cabs(z))
|
|
#define __Pyx_c_pow(a, b) (cpow(a, b))
|
|
#endif
|
|
#endif
|
|
#else
|
|
static CYTHON_INLINE int __Pyx_c_eq(__pyx_t_double_complex, __pyx_t_double_complex);
|
|
static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_sum(__pyx_t_double_complex, __pyx_t_double_complex);
|
|
static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_diff(__pyx_t_double_complex, __pyx_t_double_complex);
|
|
static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_prod(__pyx_t_double_complex, __pyx_t_double_complex);
|
|
static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_quot(__pyx_t_double_complex, __pyx_t_double_complex);
|
|
static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_neg(__pyx_t_double_complex);
|
|
static CYTHON_INLINE int __Pyx_c_is_zero(__pyx_t_double_complex);
|
|
static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_conj(__pyx_t_double_complex);
|
|
#if 1
|
|
static CYTHON_INLINE double __Pyx_c_abs(__pyx_t_double_complex);
|
|
static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_pow(__pyx_t_double_complex, __pyx_t_double_complex);
|
|
#endif
|
|
#endif
|
|
|
|
static CYTHON_INLINE PyObject* __Pyx_PyInt_From_long(long value);
|
|
|
|
static CYTHON_INLINE long __Pyx_PyInt_As_long(PyObject *);
|
|
|
|
static int __Pyx_check_binary_version(void);
|
|
|
|
#if !defined(__Pyx_PyIdentifier_FromString)
|
|
#if PY_MAJOR_VERSION < 3
|
|
#define __Pyx_PyIdentifier_FromString(s) PyString_FromString(s)
|
|
#else
|
|
#define __Pyx_PyIdentifier_FromString(s) PyUnicode_FromString(s)
|
|
#endif
|
|
#endif
|
|
|
|
static PyObject *__Pyx_ImportModule(const char *name); /*proto*/
|
|
|
|
static PyTypeObject *__Pyx_ImportType(const char *module_name, const char *class_name, size_t size, int strict); /*proto*/
|
|
|
|
typedef struct {
|
|
int code_line;
|
|
PyCodeObject* code_object;
|
|
} __Pyx_CodeObjectCacheEntry;
|
|
struct __Pyx_CodeObjectCache {
|
|
int count;
|
|
int max_count;
|
|
__Pyx_CodeObjectCacheEntry* entries;
|
|
};
|
|
static struct __Pyx_CodeObjectCache __pyx_code_cache = {0,0,NULL};
|
|
static int __pyx_bisect_code_objects(__Pyx_CodeObjectCacheEntry* entries, int count, int code_line);
|
|
static PyCodeObject *__pyx_find_code_object(int code_line);
|
|
static void __pyx_insert_code_object(int code_line, PyCodeObject* code_object);
|
|
|
|
static void __Pyx_AddTraceback(const char *funcname, int c_line,
|
|
int py_line, const char *filename); /*proto*/
|
|
|
|
static int __Pyx_InitStrings(__Pyx_StringTabEntry *t); /*proto*/
|
|
|
|
|
|
/* Module declarations from 'cpython.buffer' */
|
|
|
|
/* Module declarations from 'cpython.ref' */
|
|
|
|
/* Module declarations from 'libc.string' */
|
|
|
|
/* Module declarations from 'libc.stdio' */
|
|
|
|
/* Module declarations from 'cpython.object' */
|
|
|
|
/* Module declarations from '__builtin__' */
|
|
|
|
/* Module declarations from 'cpython.type' */
|
|
static PyTypeObject *__pyx_ptype_7cpython_4type_type = 0;
|
|
|
|
/* Module declarations from 'libc.stdlib' */
|
|
|
|
/* Module declarations from 'numpy' */
|
|
|
|
/* Module declarations from 'numpy' */
|
|
static PyTypeObject *__pyx_ptype_5numpy_dtype = 0;
|
|
static PyTypeObject *__pyx_ptype_5numpy_flatiter = 0;
|
|
static PyTypeObject *__pyx_ptype_5numpy_broadcast = 0;
|
|
static PyTypeObject *__pyx_ptype_5numpy_ndarray = 0;
|
|
static PyTypeObject *__pyx_ptype_5numpy_ufunc = 0;
|
|
static CYTHON_INLINE char *__pyx_f_5numpy__util_dtypestring(PyArray_Descr *, char *, char *, int *); /*proto*/
|
|
|
|
/* Module declarations from 'sklearn.svm.libsvm' */
|
|
static void __pyx_f_7sklearn_3svm_6libsvm_set_predict_params(struct svm_parameter *, int, PyObject *, int, double, double, double, int, int, char *, char *); /*proto*/
|
|
static __Pyx_TypeInfo __Pyx_TypeInfo_nn___pyx_t_5numpy_float64_t = { "float64_t", NULL, sizeof(__pyx_t_5numpy_float64_t), { 0 }, 0, 'R', 0, 0 };
|
|
static __Pyx_TypeInfo __Pyx_TypeInfo_nn___pyx_t_5numpy_int32_t = { "int32_t", NULL, sizeof(__pyx_t_5numpy_int32_t), { 0 }, 0, IS_UNSIGNED(__pyx_t_5numpy_int32_t) ? 'U' : 'I', IS_UNSIGNED(__pyx_t_5numpy_int32_t), 0 };
|
|
#define __Pyx_MODULE_NAME "sklearn.svm.libsvm"
|
|
int __pyx_module_is_main_sklearn__svm__libsvm = 0;
|
|
|
|
/* Implementation of 'sklearn.svm.libsvm' */
|
|
static PyObject *__pyx_builtin_MemoryError;
|
|
static PyObject *__pyx_builtin_ValueError;
|
|
static PyObject *__pyx_builtin_range;
|
|
static PyObject *__pyx_builtin_RuntimeError;
|
|
static PyObject *__pyx_pf_7sklearn_3svm_6libsvm_fit(CYTHON_UNUSED PyObject *__pyx_self, PyArrayObject *__pyx_v_X, PyArrayObject *__pyx_v_Y, int __pyx_v_svm_type, PyObject *__pyx_v_kernel, int __pyx_v_degree, double __pyx_v_gamma, double __pyx_v_coef0, double __pyx_v_tol, double __pyx_v_C, double __pyx_v_nu, double __pyx_v_epsilon, PyArrayObject *__pyx_v_class_weight, PyArrayObject *__pyx_v_sample_weight, int __pyx_v_shrinking, int __pyx_v_probability, double __pyx_v_cache_size, int __pyx_v_max_iter, int __pyx_v_random_seed); /* proto */
|
|
static PyObject *__pyx_pf_7sklearn_3svm_6libsvm_2predict(CYTHON_UNUSED PyObject *__pyx_self, PyArrayObject *__pyx_v_X, PyArrayObject *__pyx_v_support, PyArrayObject *__pyx_v_SV, PyArrayObject *__pyx_v_nSV, PyArrayObject *__pyx_v_sv_coef, PyArrayObject *__pyx_v_intercept, PyArrayObject *__pyx_v_probA, PyArrayObject *__pyx_v_probB, int __pyx_v_svm_type, PyObject *__pyx_v_kernel, int __pyx_v_degree, double __pyx_v_gamma, double __pyx_v_coef0, PyArrayObject *__pyx_v_class_weight, CYTHON_UNUSED PyArrayObject *__pyx_v_sample_weight, double __pyx_v_cache_size); /* proto */
|
|
static PyObject *__pyx_pf_7sklearn_3svm_6libsvm_4predict_proba(CYTHON_UNUSED PyObject *__pyx_self, PyArrayObject *__pyx_v_X, PyArrayObject *__pyx_v_support, PyArrayObject *__pyx_v_SV, PyArrayObject *__pyx_v_nSV, PyArrayObject *__pyx_v_sv_coef, PyArrayObject *__pyx_v_intercept, PyArrayObject *__pyx_v_probA, PyArrayObject *__pyx_v_probB, int __pyx_v_svm_type, PyObject *__pyx_v_kernel, int __pyx_v_degree, double __pyx_v_gamma, double __pyx_v_coef0, PyArrayObject *__pyx_v_class_weight, CYTHON_UNUSED PyArrayObject *__pyx_v_sample_weight, double __pyx_v_cache_size); /* proto */
|
|
static PyObject *__pyx_pf_7sklearn_3svm_6libsvm_6decision_function(CYTHON_UNUSED PyObject *__pyx_self, PyArrayObject *__pyx_v_X, PyArrayObject *__pyx_v_support, PyArrayObject *__pyx_v_SV, PyArrayObject *__pyx_v_nSV, PyArrayObject *__pyx_v_sv_coef, PyArrayObject *__pyx_v_intercept, PyArrayObject *__pyx_v_probA, PyArrayObject *__pyx_v_probB, int __pyx_v_svm_type, PyObject *__pyx_v_kernel, int __pyx_v_degree, double __pyx_v_gamma, double __pyx_v_coef0, PyArrayObject *__pyx_v_class_weight, CYTHON_UNUSED PyArrayObject *__pyx_v_sample_weight, double __pyx_v_cache_size); /* proto */
|
|
static PyObject *__pyx_pf_7sklearn_3svm_6libsvm_8cross_validation(CYTHON_UNUSED PyObject *__pyx_self, PyArrayObject *__pyx_v_X, PyArrayObject *__pyx_v_Y, int __pyx_v_n_fold, PyObject *__pyx_v_svm_type, PyObject *__pyx_v_kernel, int __pyx_v_degree, double __pyx_v_gamma, double __pyx_v_coef0, double __pyx_v_tol, double __pyx_v_C, double __pyx_v_nu, CYTHON_UNUSED double __pyx_v_epsilon, PyArrayObject *__pyx_v_class_weight, PyArrayObject *__pyx_v_sample_weight, int __pyx_v_shrinking, int __pyx_v_probability, double __pyx_v_cache_size, int __pyx_v_max_iter, int __pyx_v_random_seed); /* proto */
|
|
static PyObject *__pyx_pf_7sklearn_3svm_6libsvm_10set_verbosity_wrap(CYTHON_UNUSED PyObject *__pyx_self, int __pyx_v_verbosity); /* proto */
|
|
static int __pyx_pf_5numpy_7ndarray___getbuffer__(PyArrayObject *__pyx_v_self, Py_buffer *__pyx_v_info, int __pyx_v_flags); /* proto */
|
|
static void __pyx_pf_5numpy_7ndarray_2__releasebuffer__(PyArrayObject *__pyx_v_self, Py_buffer *__pyx_v_info); /* proto */
|
|
static char __pyx_k_B[] = "B";
|
|
static char __pyx_k_C[] = "C";
|
|
static char __pyx_k_H[] = "H";
|
|
static char __pyx_k_I[] = "I";
|
|
static char __pyx_k_L[] = "L";
|
|
static char __pyx_k_O[] = "O";
|
|
static char __pyx_k_Q[] = "Q";
|
|
static char __pyx_k_X[] = "X";
|
|
static char __pyx_k_Y[] = "Y";
|
|
static char __pyx_k_b[] = "b";
|
|
static char __pyx_k_d[] = "d";
|
|
static char __pyx_k_f[] = "f";
|
|
static char __pyx_k_g[] = "g";
|
|
static char __pyx_k_h[] = "h";
|
|
static char __pyx_k_i[] = "i";
|
|
static char __pyx_k_l[] = "l";
|
|
static char __pyx_k_q[] = "q";
|
|
static char __pyx_k_SV[] = "SV";
|
|
static char __pyx_k_Zd[] = "Zd";
|
|
static char __pyx_k_Zf[] = "Zf";
|
|
static char __pyx_k_Zg[] = "Zg";
|
|
static char __pyx_k_np[] = "np";
|
|
static char __pyx_k_nr[] = "nr";
|
|
static char __pyx_k_nu[] = "nu";
|
|
static char __pyx_k_rv[] = "rv";
|
|
static char __pyx_k_fit[] = "fit";
|
|
static char __pyx_k_nSV[] = "nSV";
|
|
static char __pyx_k_p_0[] = "p < 0";
|
|
static char __pyx_k_rbf[] = "rbf";
|
|
static char __pyx_k_tol[] = "tol";
|
|
static char __pyx_k_main[] = "__main__";
|
|
static char __pyx_k_ones[] = "ones";
|
|
static char __pyx_k_poly[] = "poly";
|
|
static char __pyx_k_test[] = "__test__";
|
|
static char __pyx_k_coef0[] = "coef0";
|
|
static char __pyx_k_dtype[] = "dtype";
|
|
static char __pyx_k_empty[] = "empty";
|
|
static char __pyx_k_gamma[] = "gamma";
|
|
static char __pyx_k_index[] = "index";
|
|
static char __pyx_k_int32[] = "int32";
|
|
static char __pyx_k_model[] = "model";
|
|
static char __pyx_k_numpy[] = "numpy";
|
|
static char __pyx_k_param[] = "param";
|
|
static char __pyx_k_probA[] = "probA";
|
|
static char __pyx_k_probB[] = "probB";
|
|
static char __pyx_k_range[] = "range";
|
|
static char __pyx_k_SV_len[] = "SV_len";
|
|
static char __pyx_k_arange[] = "arange";
|
|
static char __pyx_k_degree[] = "degree";
|
|
static char __pyx_k_import[] = "__import__";
|
|
static char __pyx_k_kernel[] = "kernel";
|
|
static char __pyx_k_linear[] = "linear";
|
|
static char __pyx_k_n_fold[] = "n_fold";
|
|
static char __pyx_k_target[] = "target";
|
|
static char __pyx_k_epsilon[] = "epsilon";
|
|
static char __pyx_k_float64[] = "float64";
|
|
static char __pyx_k_n_class[] = "n_class";
|
|
static char __pyx_k_predict[] = "predict";
|
|
static char __pyx_k_problem[] = "problem";
|
|
static char __pyx_k_sigmoid[] = "sigmoid";
|
|
static char __pyx_k_support[] = "support";
|
|
static char __pyx_k_sv_coef[] = "sv_coef";
|
|
static char __pyx_k_max_iter[] = "max_iter";
|
|
static char __pyx_k_svm_type[] = "svm_type";
|
|
static char __pyx_k_warnings[] = "warnings";
|
|
static char __pyx_k_epsilon_0[] = "epsilon < 0";
|
|
static char __pyx_k_error_msg[] = "error_msg";
|
|
static char __pyx_k_intercept[] = "intercept";
|
|
static char __pyx_k_shrinking[] = "shrinking";
|
|
static char __pyx_k_verbosity[] = "verbosity";
|
|
static char __pyx_k_ValueError[] = "ValueError";
|
|
static char __pyx_k_cache_size[] = "cache_size";
|
|
static char __pyx_k_dec_values[] = "dec_values";
|
|
static char __pyx_k_error_repl[] = "error_repl";
|
|
static char __pyx_k_fit_status[] = "fit_status";
|
|
static char __pyx_k_n_class_SV[] = "n_class_SV";
|
|
static char __pyx_k_MemoryError[] = "MemoryError";
|
|
static char __pyx_k_precomputed[] = "precomputed";
|
|
static char __pyx_k_probability[] = "probability";
|
|
static char __pyx_k_random_seed[] = "random_seed";
|
|
static char __pyx_k_RuntimeError[] = "RuntimeError";
|
|
static char __pyx_k_class_weight[] = "class_weight";
|
|
static char __pyx_k_kernel_index[] = "kernel_index";
|
|
static char __pyx_k_predict_proba[] = "predict_proba";
|
|
static char __pyx_k_pyx_getbuffer[] = "__pyx_getbuffer";
|
|
static char __pyx_k_sample_weight[] = "sample_weight";
|
|
static char __pyx_k_support_vectors[] = "support_vectors";
|
|
static char __pyx_k_cross_validation[] = "cross_validation";
|
|
static char __pyx_k_decision_function[] = "decision_function";
|
|
static char __pyx_k_pyx_releasebuffer[] = "__pyx_releasebuffer";
|
|
static char __pyx_k_class_weight_label[] = "class_weight_label";
|
|
static char __pyx_k_set_verbosity_wrap[] = "set_verbosity_wrap";
|
|
static char __pyx_k_sklearn_svm_libsvm[] = "sklearn.svm.libsvm";
|
|
static char __pyx_k_LIBSVM_KERNEL_TYPES[] = "LIBSVM_KERNEL_TYPES";
|
|
static char __pyx_k_We_ve_run_out_of_memory[] = "We've run out of memory";
|
|
static char __pyx_k_ndarray_is_not_C_contiguous[] = "ndarray is not C contiguous";
|
|
static char __pyx_k_Seems_we_ve_run_out_of_memory[] = "Seems we've run out of memory";
|
|
static char __pyx_k_Binding_for_libsvm_skl_These_ar[] = "\nBinding for libsvm_skl\n----------------------\n\nThese are the bindings for libsvm_skl, which is a fork of libsvm[1]\nthat adds to libsvm some capabilities, like index of support vectors\nand efficient representation of dense matrices.\n\nThese are low-level routines, but can be used for flexibility or\nperformance reasons. See sklearn.svm for a higher-level API.\n\nLow-level memory management is done in libsvm_helper.c. If we happen\nto run out of memory a MemoryError will be raised. In practice this is\nnot very helpful since hight changes are malloc fails inside svm.cpp,\nwhere no sort of memory checks are done.\n\n[1] http://www.csie.ntu.edu.tw/~cjlin/libsvm/\n\nNotes\n-----\nMaybe we could speed it a bit further by decorating functions with\n@cython.boundscheck(False), but probably it is not worth since all\nwork is done in lisvm_helper.c\nAlso, the signature mode='c' is somewhat superficial, since we already\ncheck that arrays are C-contiguous in svm.py\n\nAuthors\n-------\n2010: Fabian Pedregosa <fabian.pedregosa@inria.fr>\n Gael Varoquaux <gael.varoquaux@normalesup.org>\n";
|
|
static char __pyx_k_home_larsb_src_scikit_learn_skl[] = "/home/larsb/src/scikit-learn/sklearn/svm/libsvm.pyx";
|
|
static char __pyx_k_unknown_dtype_code_in_numpy_pxd[] = "unknown dtype code in numpy.pxd (%d)";
|
|
static char __pyx_k_Format_string_allocated_too_shor[] = "Format string allocated too short, see comment in numpy.pxd";
|
|
static char __pyx_k_Non_native_byte_order_not_suppor[] = "Non-native byte order not supported";
|
|
static char __pyx_k_Number_of_samples_is_less_than_n[] = "Number of samples is less than number of folds";
|
|
static char __pyx_k_ndarray_is_not_Fortran_contiguou[] = "ndarray is not Fortran contiguous";
|
|
static char __pyx_k_sample_weight_and_X_have_incompa[] = "sample_weight and X have incompatible shapes: ";
|
|
static char __pyx_k_sample_weight_has_s_samples_whil[] = "sample_weight has %s samples while X has %s";
|
|
static char __pyx_k_Format_string_allocated_too_shor_2[] = "Format string allocated too short.";
|
|
static PyObject *__pyx_n_s_C;
|
|
static PyObject *__pyx_kp_u_Format_string_allocated_too_shor;
|
|
static PyObject *__pyx_kp_u_Format_string_allocated_too_shor_2;
|
|
static PyObject *__pyx_n_s_LIBSVM_KERNEL_TYPES;
|
|
static PyObject *__pyx_n_s_MemoryError;
|
|
static PyObject *__pyx_kp_u_Non_native_byte_order_not_suppor;
|
|
static PyObject *__pyx_kp_s_Number_of_samples_is_less_than_n;
|
|
static PyObject *__pyx_n_s_RuntimeError;
|
|
static PyObject *__pyx_n_s_SV;
|
|
static PyObject *__pyx_n_s_SV_len;
|
|
static PyObject *__pyx_kp_s_Seems_we_ve_run_out_of_memory;
|
|
static PyObject *__pyx_n_s_ValueError;
|
|
static PyObject *__pyx_kp_s_We_ve_run_out_of_memory;
|
|
static PyObject *__pyx_n_s_X;
|
|
static PyObject *__pyx_n_s_Y;
|
|
static PyObject *__pyx_n_s_arange;
|
|
static PyObject *__pyx_n_s_cache_size;
|
|
static PyObject *__pyx_n_s_class_weight;
|
|
static PyObject *__pyx_n_s_class_weight_label;
|
|
static PyObject *__pyx_n_s_coef0;
|
|
static PyObject *__pyx_n_s_cross_validation;
|
|
static PyObject *__pyx_n_s_dec_values;
|
|
static PyObject *__pyx_n_s_decision_function;
|
|
static PyObject *__pyx_n_s_degree;
|
|
static PyObject *__pyx_n_s_dtype;
|
|
static PyObject *__pyx_n_s_empty;
|
|
static PyObject *__pyx_n_s_epsilon;
|
|
static PyObject *__pyx_kp_s_epsilon_0;
|
|
static PyObject *__pyx_n_s_error_msg;
|
|
static PyObject *__pyx_n_s_error_repl;
|
|
static PyObject *__pyx_n_s_fit;
|
|
static PyObject *__pyx_n_s_fit_status;
|
|
static PyObject *__pyx_n_s_float64;
|
|
static PyObject *__pyx_n_s_gamma;
|
|
static PyObject *__pyx_kp_s_home_larsb_src_scikit_learn_skl;
|
|
static PyObject *__pyx_n_s_import;
|
|
static PyObject *__pyx_n_s_index;
|
|
static PyObject *__pyx_n_s_int32;
|
|
static PyObject *__pyx_n_s_intercept;
|
|
static PyObject *__pyx_n_s_kernel;
|
|
static PyObject *__pyx_n_s_kernel_index;
|
|
static PyObject *__pyx_n_s_linear;
|
|
static PyObject *__pyx_n_s_main;
|
|
static PyObject *__pyx_n_s_max_iter;
|
|
static PyObject *__pyx_n_s_model;
|
|
static PyObject *__pyx_n_s_nSV;
|
|
static PyObject *__pyx_n_s_n_class;
|
|
static PyObject *__pyx_n_s_n_class_SV;
|
|
static PyObject *__pyx_n_s_n_fold;
|
|
static PyObject *__pyx_kp_u_ndarray_is_not_C_contiguous;
|
|
static PyObject *__pyx_kp_u_ndarray_is_not_Fortran_contiguou;
|
|
static PyObject *__pyx_n_s_np;
|
|
static PyObject *__pyx_n_s_nr;
|
|
static PyObject *__pyx_n_s_nu;
|
|
static PyObject *__pyx_n_s_numpy;
|
|
static PyObject *__pyx_n_s_ones;
|
|
static PyObject *__pyx_kp_s_p_0;
|
|
static PyObject *__pyx_n_s_param;
|
|
static PyObject *__pyx_n_s_poly;
|
|
static PyObject *__pyx_n_s_precomputed;
|
|
static PyObject *__pyx_n_s_predict;
|
|
static PyObject *__pyx_n_s_predict_proba;
|
|
static PyObject *__pyx_n_s_probA;
|
|
static PyObject *__pyx_n_s_probB;
|
|
static PyObject *__pyx_n_s_probability;
|
|
static PyObject *__pyx_n_s_problem;
|
|
static PyObject *__pyx_n_s_pyx_getbuffer;
|
|
static PyObject *__pyx_n_s_pyx_releasebuffer;
|
|
static PyObject *__pyx_n_s_random_seed;
|
|
static PyObject *__pyx_n_s_range;
|
|
static PyObject *__pyx_n_s_rbf;
|
|
static PyObject *__pyx_n_s_rv;
|
|
static PyObject *__pyx_n_s_sample_weight;
|
|
static PyObject *__pyx_kp_s_sample_weight_and_X_have_incompa;
|
|
static PyObject *__pyx_kp_s_sample_weight_has_s_samples_whil;
|
|
static PyObject *__pyx_n_s_set_verbosity_wrap;
|
|
static PyObject *__pyx_n_s_shrinking;
|
|
static PyObject *__pyx_n_s_sigmoid;
|
|
static PyObject *__pyx_n_s_sklearn_svm_libsvm;
|
|
static PyObject *__pyx_n_s_support;
|
|
static PyObject *__pyx_n_s_support_vectors;
|
|
static PyObject *__pyx_n_s_sv_coef;
|
|
static PyObject *__pyx_n_s_svm_type;
|
|
static PyObject *__pyx_n_s_target;
|
|
static PyObject *__pyx_n_s_test;
|
|
static PyObject *__pyx_n_s_tol;
|
|
static PyObject *__pyx_kp_u_unknown_dtype_code_in_numpy_pxd;
|
|
static PyObject *__pyx_n_s_verbosity;
|
|
static PyObject *__pyx_n_s_warnings;
|
|
static PyObject *__pyx_int_0;
|
|
static PyObject *__pyx_int_1;
|
|
static PyObject *__pyx_int_2;
|
|
static PyObject *__pyx_int_4;
|
|
static PyArrayObject *__pyx_k_;
|
|
static PyArrayObject *__pyx_k__2;
|
|
static PyArrayObject *__pyx_k__10;
|
|
static PyArrayObject *__pyx_k__11;
|
|
static PyArrayObject *__pyx_k__12;
|
|
static PyArrayObject *__pyx_k__13;
|
|
static PyArrayObject *__pyx_k__15;
|
|
static PyArrayObject *__pyx_k__16;
|
|
static PyArrayObject *__pyx_k__17;
|
|
static PyArrayObject *__pyx_k__18;
|
|
static PyArrayObject *__pyx_k__20;
|
|
static PyArrayObject *__pyx_k__21;
|
|
static PyArrayObject *__pyx_k__22;
|
|
static PyArrayObject *__pyx_k__23;
|
|
static PyArrayObject *__pyx_k__25;
|
|
static PyArrayObject *__pyx_k__26;
|
|
static PyObject *__pyx_tuple__3;
|
|
static PyObject *__pyx_tuple__4;
|
|
static PyObject *__pyx_tuple__5;
|
|
static PyObject *__pyx_tuple__6;
|
|
static PyObject *__pyx_tuple__7;
|
|
static PyObject *__pyx_tuple__8;
|
|
static PyObject *__pyx_tuple__9;
|
|
static PyObject *__pyx_tuple__14;
|
|
static PyObject *__pyx_tuple__19;
|
|
static PyObject *__pyx_tuple__24;
|
|
static PyObject *__pyx_tuple__27;
|
|
static PyObject *__pyx_tuple__28;
|
|
static PyObject *__pyx_tuple__29;
|
|
static PyObject *__pyx_tuple__30;
|
|
static PyObject *__pyx_tuple__31;
|
|
static PyObject *__pyx_tuple__32;
|
|
static PyObject *__pyx_tuple__33;
|
|
static PyObject *__pyx_tuple__34;
|
|
static PyObject *__pyx_tuple__35;
|
|
static PyObject *__pyx_tuple__36;
|
|
static PyObject *__pyx_tuple__37;
|
|
static PyObject *__pyx_tuple__39;
|
|
static PyObject *__pyx_tuple__40;
|
|
static PyObject *__pyx_tuple__41;
|
|
static PyObject *__pyx_tuple__42;
|
|
static PyObject *__pyx_tuple__43;
|
|
static PyObject *__pyx_tuple__45;
|
|
static PyObject *__pyx_tuple__46;
|
|
static PyObject *__pyx_tuple__47;
|
|
static PyObject *__pyx_tuple__48;
|
|
static PyObject *__pyx_tuple__49;
|
|
static PyObject *__pyx_tuple__51;
|
|
static PyObject *__pyx_tuple__52;
|
|
static PyObject *__pyx_tuple__53;
|
|
static PyObject *__pyx_tuple__54;
|
|
static PyObject *__pyx_tuple__55;
|
|
static PyObject *__pyx_tuple__57;
|
|
static PyObject *__pyx_tuple__58;
|
|
static PyObject *__pyx_tuple__59;
|
|
static PyObject *__pyx_tuple__61;
|
|
static PyObject *__pyx_codeobj__38;
|
|
static PyObject *__pyx_codeobj__44;
|
|
static PyObject *__pyx_codeobj__50;
|
|
static PyObject *__pyx_codeobj__56;
|
|
static PyObject *__pyx_codeobj__60;
|
|
static PyObject *__pyx_codeobj__62;
|
|
|
|
/* "sklearn/svm/libsvm.pyx":54
|
|
* # Wrapper functions
|
|
*
|
|
* def fit( # <<<<<<<<<<<<<<
|
|
* np.ndarray[np.float64_t, ndim=2, mode='c'] X,
|
|
* np.ndarray[np.float64_t, ndim=1, mode='c'] Y,
|
|
*/
|
|
|
|
/* Python wrapper */
|
|
static PyObject *__pyx_pw_7sklearn_3svm_6libsvm_1fit(PyObject *__pyx_self, PyObject *__pyx_args, PyObject *__pyx_kwds); /*proto*/
|
|
static char __pyx_doc_7sklearn_3svm_6libsvm_fit[] = "\n Train the model using libsvm (low-level method)\n\n Parameters\n ----------\n X : array-like, dtype=float64, size=[n_samples, n_features]\n\n Y : array, dtype=float64, size=[n_samples]\n target vector\n\n svm_type : {0, 1, 2, 3, 4}, optional\n Type of SVM: C_SVC, NuSVC, OneClassSVM, EpsilonSVR or NuSVR\n respectively. 0 by default.\n\n kernel : {'linear', 'rbf', 'poly', 'sigmoid', 'precomputed'}, optional\n Kernel to use in the model: linear, polynomial, RBF, sigmoid\n or precomputed. 'rbf' by default.\n\n degree : int32, optional\n Degree of the polynomial kernel (only relevant if kernel is\n set to polynomial), 3 by default.\n\n gamma : float64, optional\n Gamma parameter in RBF kernel (only relevant if kernel is set\n to RBF). 0.1 by default.\n\n coef0 : float64, optional\n Independent parameter in poly/sigmoid kernel. 0 by default.\n\n tol : float64, optional\n Numeric stopping criterion (WRITEME). 1e-3 by default.\n\n C : float64, optional\n C parameter in C-Support Vector Classification. 1 by default.\n\n nu : float64, optional\n 0.5 by default.\n\n epsilon : double, optional\n 0.1 by default.\n\n class_weight : array, dtype float64, shape (n_classes,), optional\n np.empty(0) by default.\n\n sample_weight : array, dtype float64, shape (n_samples,), optional\n np.empty(0) by default.\n\n shrinking : int, optional\n 1 by default.\n\n probability : int, optional\n 0 by default.\n\n cache_size : float64, optional\n Cache size for gram matrix columns (in megabytes). 100 by default.\n\n max_iter : int (-1 for no limit), optional.\n Stop solver after this many iterations regardless of accuracy\n (XXX Currently there is no API to know whether this kicked in.)\n -1 by default.\n\n random_seed : int, optional\n Seed for the random number generator"" used for probability estimates.\n 0 by default.\n\n Returns\n -------\n support : array, shape=[n_support]\n index of support vectors\n\n support_vectors : array, shape=[n_support, n_features]\n support vectors (equivalent to X[support]). Will return an\n empty array in the case of precomputed kernel.\n\n n_class_SV : array\n number of support vectors in each class.\n\n sv_coef : array\n coefficients of support vectors in decision function.\n\n intercept : array\n intercept in decision function\n\n probA, probB : array\n probability estimates, empty array for probability=False\n ";
|
|
static PyMethodDef __pyx_mdef_7sklearn_3svm_6libsvm_1fit = {__Pyx_NAMESTR("fit"), (PyCFunction)__pyx_pw_7sklearn_3svm_6libsvm_1fit, METH_VARARGS|METH_KEYWORDS, __Pyx_DOCSTR(__pyx_doc_7sklearn_3svm_6libsvm_fit)};
|
|
static PyObject *__pyx_pw_7sklearn_3svm_6libsvm_1fit(PyObject *__pyx_self, PyObject *__pyx_args, PyObject *__pyx_kwds) {
|
|
PyArrayObject *__pyx_v_X = 0;
|
|
PyArrayObject *__pyx_v_Y = 0;
|
|
int __pyx_v_svm_type;
|
|
PyObject *__pyx_v_kernel = 0;
|
|
int __pyx_v_degree;
|
|
double __pyx_v_gamma;
|
|
double __pyx_v_coef0;
|
|
double __pyx_v_tol;
|
|
double __pyx_v_C;
|
|
double __pyx_v_nu;
|
|
double __pyx_v_epsilon;
|
|
PyArrayObject *__pyx_v_class_weight = 0;
|
|
PyArrayObject *__pyx_v_sample_weight = 0;
|
|
int __pyx_v_shrinking;
|
|
int __pyx_v_probability;
|
|
double __pyx_v_cache_size;
|
|
int __pyx_v_max_iter;
|
|
int __pyx_v_random_seed;
|
|
int __pyx_lineno = 0;
|
|
const char *__pyx_filename = NULL;
|
|
int __pyx_clineno = 0;
|
|
PyObject *__pyx_r = 0;
|
|
__Pyx_RefNannyDeclarations
|
|
__Pyx_RefNannySetupContext("fit (wrapper)", 0);
|
|
{
|
|
static PyObject **__pyx_pyargnames[] = {&__pyx_n_s_X,&__pyx_n_s_Y,&__pyx_n_s_svm_type,&__pyx_n_s_kernel,&__pyx_n_s_degree,&__pyx_n_s_gamma,&__pyx_n_s_coef0,&__pyx_n_s_tol,&__pyx_n_s_C,&__pyx_n_s_nu,&__pyx_n_s_epsilon,&__pyx_n_s_class_weight,&__pyx_n_s_sample_weight,&__pyx_n_s_shrinking,&__pyx_n_s_probability,&__pyx_n_s_cache_size,&__pyx_n_s_max_iter,&__pyx_n_s_random_seed,0};
|
|
PyObject* values[18] = {0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0};
|
|
values[3] = ((PyObject*)__pyx_n_s_rbf);
|
|
values[11] = (PyObject *)__pyx_k_;
|
|
values[12] = (PyObject *)__pyx_k__2;
|
|
if (unlikely(__pyx_kwds)) {
|
|
Py_ssize_t kw_args;
|
|
const Py_ssize_t pos_args = PyTuple_GET_SIZE(__pyx_args);
|
|
switch (pos_args) {
|
|
case 18: values[17] = PyTuple_GET_ITEM(__pyx_args, 17);
|
|
case 17: values[16] = PyTuple_GET_ITEM(__pyx_args, 16);
|
|
case 16: values[15] = PyTuple_GET_ITEM(__pyx_args, 15);
|
|
case 15: values[14] = PyTuple_GET_ITEM(__pyx_args, 14);
|
|
case 14: values[13] = PyTuple_GET_ITEM(__pyx_args, 13);
|
|
case 13: values[12] = PyTuple_GET_ITEM(__pyx_args, 12);
|
|
case 12: values[11] = PyTuple_GET_ITEM(__pyx_args, 11);
|
|
case 11: values[10] = PyTuple_GET_ITEM(__pyx_args, 10);
|
|
case 10: values[9] = PyTuple_GET_ITEM(__pyx_args, 9);
|
|
case 9: values[8] = PyTuple_GET_ITEM(__pyx_args, 8);
|
|
case 8: values[7] = PyTuple_GET_ITEM(__pyx_args, 7);
|
|
case 7: values[6] = PyTuple_GET_ITEM(__pyx_args, 6);
|
|
case 6: values[5] = PyTuple_GET_ITEM(__pyx_args, 5);
|
|
case 5: values[4] = PyTuple_GET_ITEM(__pyx_args, 4);
|
|
case 4: values[3] = PyTuple_GET_ITEM(__pyx_args, 3);
|
|
case 3: values[2] = PyTuple_GET_ITEM(__pyx_args, 2);
|
|
case 2: values[1] = PyTuple_GET_ITEM(__pyx_args, 1);
|
|
case 1: values[0] = PyTuple_GET_ITEM(__pyx_args, 0);
|
|
case 0: break;
|
|
default: goto __pyx_L5_argtuple_error;
|
|
}
|
|
kw_args = PyDict_Size(__pyx_kwds);
|
|
switch (pos_args) {
|
|
case 0:
|
|
if (likely((values[0] = PyDict_GetItem(__pyx_kwds, __pyx_n_s_X)) != 0)) kw_args--;
|
|
else goto __pyx_L5_argtuple_error;
|
|
case 1:
|
|
if (likely((values[1] = PyDict_GetItem(__pyx_kwds, __pyx_n_s_Y)) != 0)) kw_args--;
|
|
else {
|
|
__Pyx_RaiseArgtupleInvalid("fit", 0, 2, 18, 1); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 54; __pyx_clineno = __LINE__; goto __pyx_L3_error;}
|
|
}
|
|
case 2:
|
|
if (kw_args > 0) {
|
|
PyObject* value = PyDict_GetItem(__pyx_kwds, __pyx_n_s_svm_type);
|
|
if (value) { values[2] = value; kw_args--; }
|
|
}
|
|
case 3:
|
|
if (kw_args > 0) {
|
|
PyObject* value = PyDict_GetItem(__pyx_kwds, __pyx_n_s_kernel);
|
|
if (value) { values[3] = value; kw_args--; }
|
|
}
|
|
case 4:
|
|
if (kw_args > 0) {
|
|
PyObject* value = PyDict_GetItem(__pyx_kwds, __pyx_n_s_degree);
|
|
if (value) { values[4] = value; kw_args--; }
|
|
}
|
|
case 5:
|
|
if (kw_args > 0) {
|
|
PyObject* value = PyDict_GetItem(__pyx_kwds, __pyx_n_s_gamma);
|
|
if (value) { values[5] = value; kw_args--; }
|
|
}
|
|
case 6:
|
|
if (kw_args > 0) {
|
|
PyObject* value = PyDict_GetItem(__pyx_kwds, __pyx_n_s_coef0);
|
|
if (value) { values[6] = value; kw_args--; }
|
|
}
|
|
case 7:
|
|
if (kw_args > 0) {
|
|
PyObject* value = PyDict_GetItem(__pyx_kwds, __pyx_n_s_tol);
|
|
if (value) { values[7] = value; kw_args--; }
|
|
}
|
|
case 8:
|
|
if (kw_args > 0) {
|
|
PyObject* value = PyDict_GetItem(__pyx_kwds, __pyx_n_s_C);
|
|
if (value) { values[8] = value; kw_args--; }
|
|
}
|
|
case 9:
|
|
if (kw_args > 0) {
|
|
PyObject* value = PyDict_GetItem(__pyx_kwds, __pyx_n_s_nu);
|
|
if (value) { values[9] = value; kw_args--; }
|
|
}
|
|
case 10:
|
|
if (kw_args > 0) {
|
|
PyObject* value = PyDict_GetItem(__pyx_kwds, __pyx_n_s_epsilon);
|
|
if (value) { values[10] = value; kw_args--; }
|
|
}
|
|
case 11:
|
|
if (kw_args > 0) {
|
|
PyObject* value = PyDict_GetItem(__pyx_kwds, __pyx_n_s_class_weight);
|
|
if (value) { values[11] = value; kw_args--; }
|
|
}
|
|
case 12:
|
|
if (kw_args > 0) {
|
|
PyObject* value = PyDict_GetItem(__pyx_kwds, __pyx_n_s_sample_weight);
|
|
if (value) { values[12] = value; kw_args--; }
|
|
}
|
|
case 13:
|
|
if (kw_args > 0) {
|
|
PyObject* value = PyDict_GetItem(__pyx_kwds, __pyx_n_s_shrinking);
|
|
if (value) { values[13] = value; kw_args--; }
|
|
}
|
|
case 14:
|
|
if (kw_args > 0) {
|
|
PyObject* value = PyDict_GetItem(__pyx_kwds, __pyx_n_s_probability);
|
|
if (value) { values[14] = value; kw_args--; }
|
|
}
|
|
case 15:
|
|
if (kw_args > 0) {
|
|
PyObject* value = PyDict_GetItem(__pyx_kwds, __pyx_n_s_cache_size);
|
|
if (value) { values[15] = value; kw_args--; }
|
|
}
|
|
case 16:
|
|
if (kw_args > 0) {
|
|
PyObject* value = PyDict_GetItem(__pyx_kwds, __pyx_n_s_max_iter);
|
|
if (value) { values[16] = value; kw_args--; }
|
|
}
|
|
case 17:
|
|
if (kw_args > 0) {
|
|
PyObject* value = PyDict_GetItem(__pyx_kwds, __pyx_n_s_random_seed);
|
|
if (value) { values[17] = value; kw_args--; }
|
|
}
|
|
}
|
|
if (unlikely(kw_args > 0)) {
|
|
if (unlikely(__Pyx_ParseOptionalKeywords(__pyx_kwds, __pyx_pyargnames, 0, values, pos_args, "fit") < 0)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 54; __pyx_clineno = __LINE__; goto __pyx_L3_error;}
|
|
}
|
|
} else {
|
|
switch (PyTuple_GET_SIZE(__pyx_args)) {
|
|
case 18: values[17] = PyTuple_GET_ITEM(__pyx_args, 17);
|
|
case 17: values[16] = PyTuple_GET_ITEM(__pyx_args, 16);
|
|
case 16: values[15] = PyTuple_GET_ITEM(__pyx_args, 15);
|
|
case 15: values[14] = PyTuple_GET_ITEM(__pyx_args, 14);
|
|
case 14: values[13] = PyTuple_GET_ITEM(__pyx_args, 13);
|
|
case 13: values[12] = PyTuple_GET_ITEM(__pyx_args, 12);
|
|
case 12: values[11] = PyTuple_GET_ITEM(__pyx_args, 11);
|
|
case 11: values[10] = PyTuple_GET_ITEM(__pyx_args, 10);
|
|
case 10: values[9] = PyTuple_GET_ITEM(__pyx_args, 9);
|
|
case 9: values[8] = PyTuple_GET_ITEM(__pyx_args, 8);
|
|
case 8: values[7] = PyTuple_GET_ITEM(__pyx_args, 7);
|
|
case 7: values[6] = PyTuple_GET_ITEM(__pyx_args, 6);
|
|
case 6: values[5] = PyTuple_GET_ITEM(__pyx_args, 5);
|
|
case 5: values[4] = PyTuple_GET_ITEM(__pyx_args, 4);
|
|
case 4: values[3] = PyTuple_GET_ITEM(__pyx_args, 3);
|
|
case 3: values[2] = PyTuple_GET_ITEM(__pyx_args, 2);
|
|
case 2: values[1] = PyTuple_GET_ITEM(__pyx_args, 1);
|
|
values[0] = PyTuple_GET_ITEM(__pyx_args, 0);
|
|
break;
|
|
default: goto __pyx_L5_argtuple_error;
|
|
}
|
|
}
|
|
__pyx_v_X = ((PyArrayObject *)values[0]);
|
|
__pyx_v_Y = ((PyArrayObject *)values[1]);
|
|
if (values[2]) {
|
|
__pyx_v_svm_type = __Pyx_PyInt_As_int(values[2]); if (unlikely((__pyx_v_svm_type == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 57; __pyx_clineno = __LINE__; goto __pyx_L3_error;}
|
|
} else {
|
|
__pyx_v_svm_type = ((int)0);
|
|
}
|
|
__pyx_v_kernel = ((PyObject*)values[3]);
|
|
if (values[4]) {
|
|
__pyx_v_degree = __Pyx_PyInt_As_int(values[4]); if (unlikely((__pyx_v_degree == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 57; __pyx_clineno = __LINE__; goto __pyx_L3_error;}
|
|
} else {
|
|
__pyx_v_degree = ((int)3);
|
|
}
|
|
if (values[5]) {
|
|
__pyx_v_gamma = __pyx_PyFloat_AsDouble(values[5]); if (unlikely((__pyx_v_gamma == (double)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 58; __pyx_clineno = __LINE__; goto __pyx_L3_error;}
|
|
} else {
|
|
__pyx_v_gamma = ((double)0.1);
|
|
}
|
|
if (values[6]) {
|
|
__pyx_v_coef0 = __pyx_PyFloat_AsDouble(values[6]); if (unlikely((__pyx_v_coef0 == (double)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 58; __pyx_clineno = __LINE__; goto __pyx_L3_error;}
|
|
} else {
|
|
__pyx_v_coef0 = ((double)0.);
|
|
}
|
|
if (values[7]) {
|
|
__pyx_v_tol = __pyx_PyFloat_AsDouble(values[7]); if (unlikely((__pyx_v_tol == (double)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 58; __pyx_clineno = __LINE__; goto __pyx_L3_error;}
|
|
} else {
|
|
__pyx_v_tol = ((double)1e-3);
|
|
}
|
|
if (values[8]) {
|
|
__pyx_v_C = __pyx_PyFloat_AsDouble(values[8]); if (unlikely((__pyx_v_C == (double)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 59; __pyx_clineno = __LINE__; goto __pyx_L3_error;}
|
|
} else {
|
|
__pyx_v_C = ((double)1.);
|
|
}
|
|
if (values[9]) {
|
|
__pyx_v_nu = __pyx_PyFloat_AsDouble(values[9]); if (unlikely((__pyx_v_nu == (double)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 59; __pyx_clineno = __LINE__; goto __pyx_L3_error;}
|
|
} else {
|
|
__pyx_v_nu = ((double)0.5);
|
|
}
|
|
if (values[10]) {
|
|
__pyx_v_epsilon = __pyx_PyFloat_AsDouble(values[10]); if (unlikely((__pyx_v_epsilon == (double)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 59; __pyx_clineno = __LINE__; goto __pyx_L3_error;}
|
|
} else {
|
|
__pyx_v_epsilon = ((double)0.1);
|
|
}
|
|
__pyx_v_class_weight = ((PyArrayObject *)values[11]);
|
|
__pyx_v_sample_weight = ((PyArrayObject *)values[12]);
|
|
if (values[13]) {
|
|
__pyx_v_shrinking = __Pyx_PyInt_As_int(values[13]); if (unlikely((__pyx_v_shrinking == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 64; __pyx_clineno = __LINE__; goto __pyx_L3_error;}
|
|
} else {
|
|
__pyx_v_shrinking = ((int)1);
|
|
}
|
|
if (values[14]) {
|
|
__pyx_v_probability = __Pyx_PyInt_As_int(values[14]); if (unlikely((__pyx_v_probability == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 64; __pyx_clineno = __LINE__; goto __pyx_L3_error;}
|
|
} else {
|
|
__pyx_v_probability = ((int)0);
|
|
}
|
|
if (values[15]) {
|
|
__pyx_v_cache_size = __pyx_PyFloat_AsDouble(values[15]); if (unlikely((__pyx_v_cache_size == (double)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 65; __pyx_clineno = __LINE__; goto __pyx_L3_error;}
|
|
} else {
|
|
__pyx_v_cache_size = ((double)100.);
|
|
}
|
|
if (values[16]) {
|
|
__pyx_v_max_iter = __Pyx_PyInt_As_int(values[16]); if (unlikely((__pyx_v_max_iter == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 66; __pyx_clineno = __LINE__; goto __pyx_L3_error;}
|
|
} else {
|
|
__pyx_v_max_iter = ((int)-1);
|
|
}
|
|
if (values[17]) {
|
|
__pyx_v_random_seed = __Pyx_PyInt_As_int(values[17]); if (unlikely((__pyx_v_random_seed == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 67; __pyx_clineno = __LINE__; goto __pyx_L3_error;}
|
|
} else {
|
|
__pyx_v_random_seed = ((int)0);
|
|
}
|
|
}
|
|
goto __pyx_L4_argument_unpacking_done;
|
|
__pyx_L5_argtuple_error:;
|
|
__Pyx_RaiseArgtupleInvalid("fit", 0, 2, 18, PyTuple_GET_SIZE(__pyx_args)); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 54; __pyx_clineno = __LINE__; goto __pyx_L3_error;}
|
|
__pyx_L3_error:;
|
|
__Pyx_AddTraceback("sklearn.svm.libsvm.fit", __pyx_clineno, __pyx_lineno, __pyx_filename);
|
|
__Pyx_RefNannyFinishContext();
|
|
return NULL;
|
|
__pyx_L4_argument_unpacking_done:;
|
|
if (unlikely(!__Pyx_ArgTypeTest(((PyObject *)__pyx_v_X), __pyx_ptype_5numpy_ndarray, 1, "X", 0))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 55; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
if (unlikely(!__Pyx_ArgTypeTest(((PyObject *)__pyx_v_Y), __pyx_ptype_5numpy_ndarray, 1, "Y", 0))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 56; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
if (unlikely(!__Pyx_ArgTypeTest(((PyObject *)__pyx_v_kernel), (&PyString_Type), 1, "kernel", 1))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 57; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
if (unlikely(!__Pyx_ArgTypeTest(((PyObject *)__pyx_v_class_weight), __pyx_ptype_5numpy_ndarray, 1, "class_weight", 0))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 60; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
if (unlikely(!__Pyx_ArgTypeTest(((PyObject *)__pyx_v_sample_weight), __pyx_ptype_5numpy_ndarray, 1, "sample_weight", 0))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 62; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__pyx_r = __pyx_pf_7sklearn_3svm_6libsvm_fit(__pyx_self, __pyx_v_X, __pyx_v_Y, __pyx_v_svm_type, __pyx_v_kernel, __pyx_v_degree, __pyx_v_gamma, __pyx_v_coef0, __pyx_v_tol, __pyx_v_C, __pyx_v_nu, __pyx_v_epsilon, __pyx_v_class_weight, __pyx_v_sample_weight, __pyx_v_shrinking, __pyx_v_probability, __pyx_v_cache_size, __pyx_v_max_iter, __pyx_v_random_seed);
|
|
|
|
/* function exit code */
|
|
goto __pyx_L0;
|
|
__pyx_L1_error:;
|
|
__pyx_r = NULL;
|
|
__pyx_L0:;
|
|
__Pyx_RefNannyFinishContext();
|
|
return __pyx_r;
|
|
}
|
|
|
|
static PyObject *__pyx_pf_7sklearn_3svm_6libsvm_fit(CYTHON_UNUSED PyObject *__pyx_self, PyArrayObject *__pyx_v_X, PyArrayObject *__pyx_v_Y, int __pyx_v_svm_type, PyObject *__pyx_v_kernel, int __pyx_v_degree, double __pyx_v_gamma, double __pyx_v_coef0, double __pyx_v_tol, double __pyx_v_C, double __pyx_v_nu, double __pyx_v_epsilon, PyArrayObject *__pyx_v_class_weight, PyArrayObject *__pyx_v_sample_weight, int __pyx_v_shrinking, int __pyx_v_probability, double __pyx_v_cache_size, int __pyx_v_max_iter, int __pyx_v_random_seed) {
|
|
struct svm_parameter __pyx_v_param;
|
|
struct svm_problem __pyx_v_problem;
|
|
struct svm_model *__pyx_v_model;
|
|
char const *__pyx_v_error_msg;
|
|
npy_intp __pyx_v_SV_len;
|
|
PyObject *__pyx_v_kernel_index = NULL;
|
|
PyArrayObject *__pyx_v_class_weight_label = 0;
|
|
PyObject *__pyx_v_error_repl = NULL;
|
|
int __pyx_v_fit_status;
|
|
PyObject *__pyx_v_n_class = NULL;
|
|
PyArrayObject *__pyx_v_sv_coef = 0;
|
|
PyArrayObject *__pyx_v_intercept = 0;
|
|
PyArrayObject *__pyx_v_support = 0;
|
|
PyArrayObject *__pyx_v_support_vectors = 0;
|
|
PyArrayObject *__pyx_v_n_class_SV = 0;
|
|
PyArrayObject *__pyx_v_probA = 0;
|
|
PyArrayObject *__pyx_v_probB = 0;
|
|
__Pyx_LocalBuf_ND __pyx_pybuffernd_X;
|
|
__Pyx_Buffer __pyx_pybuffer_X;
|
|
__Pyx_LocalBuf_ND __pyx_pybuffernd_Y;
|
|
__Pyx_Buffer __pyx_pybuffer_Y;
|
|
__Pyx_LocalBuf_ND __pyx_pybuffernd_class_weight;
|
|
__Pyx_Buffer __pyx_pybuffer_class_weight;
|
|
__Pyx_LocalBuf_ND __pyx_pybuffernd_class_weight_label;
|
|
__Pyx_Buffer __pyx_pybuffer_class_weight_label;
|
|
__Pyx_LocalBuf_ND __pyx_pybuffernd_intercept;
|
|
__Pyx_Buffer __pyx_pybuffer_intercept;
|
|
__Pyx_LocalBuf_ND __pyx_pybuffernd_n_class_SV;
|
|
__Pyx_Buffer __pyx_pybuffer_n_class_SV;
|
|
__Pyx_LocalBuf_ND __pyx_pybuffernd_probA;
|
|
__Pyx_Buffer __pyx_pybuffer_probA;
|
|
__Pyx_LocalBuf_ND __pyx_pybuffernd_probB;
|
|
__Pyx_Buffer __pyx_pybuffer_probB;
|
|
__Pyx_LocalBuf_ND __pyx_pybuffernd_sample_weight;
|
|
__Pyx_Buffer __pyx_pybuffer_sample_weight;
|
|
__Pyx_LocalBuf_ND __pyx_pybuffernd_support;
|
|
__Pyx_Buffer __pyx_pybuffer_support;
|
|
__Pyx_LocalBuf_ND __pyx_pybuffernd_support_vectors;
|
|
__Pyx_Buffer __pyx_pybuffer_support_vectors;
|
|
__Pyx_LocalBuf_ND __pyx_pybuffernd_sv_coef;
|
|
__Pyx_Buffer __pyx_pybuffer_sv_coef;
|
|
PyObject *__pyx_r = NULL;
|
|
__Pyx_RefNannyDeclarations
|
|
Py_ssize_t __pyx_t_1;
|
|
int __pyx_t_2;
|
|
PyObject *__pyx_t_3 = NULL;
|
|
PyObject *__pyx_t_4 = NULL;
|
|
PyObject *__pyx_t_5 = NULL;
|
|
PyObject *__pyx_t_6 = NULL;
|
|
PyObject *__pyx_t_7 = NULL;
|
|
PyArrayObject *__pyx_t_8 = NULL;
|
|
int __pyx_t_9;
|
|
PyObject *__pyx_t_10 = NULL;
|
|
PyObject *__pyx_t_11 = NULL;
|
|
PyObject *__pyx_t_12 = NULL;
|
|
PyArrayObject *__pyx_t_13 = NULL;
|
|
PyArrayObject *__pyx_t_14 = NULL;
|
|
PyArrayObject *__pyx_t_15 = NULL;
|
|
PyArrayObject *__pyx_t_16 = NULL;
|
|
PyArrayObject *__pyx_t_17 = NULL;
|
|
PyArrayObject *__pyx_t_18 = NULL;
|
|
PyArrayObject *__pyx_t_19 = NULL;
|
|
PyArrayObject *__pyx_t_20 = NULL;
|
|
int __pyx_lineno = 0;
|
|
const char *__pyx_filename = NULL;
|
|
int __pyx_clineno = 0;
|
|
__Pyx_RefNannySetupContext("fit", 0);
|
|
__Pyx_INCREF((PyObject *)__pyx_v_sample_weight);
|
|
__pyx_pybuffer_class_weight_label.pybuffer.buf = NULL;
|
|
__pyx_pybuffer_class_weight_label.refcount = 0;
|
|
__pyx_pybuffernd_class_weight_label.data = NULL;
|
|
__pyx_pybuffernd_class_weight_label.rcbuffer = &__pyx_pybuffer_class_weight_label;
|
|
__pyx_pybuffer_sv_coef.pybuffer.buf = NULL;
|
|
__pyx_pybuffer_sv_coef.refcount = 0;
|
|
__pyx_pybuffernd_sv_coef.data = NULL;
|
|
__pyx_pybuffernd_sv_coef.rcbuffer = &__pyx_pybuffer_sv_coef;
|
|
__pyx_pybuffer_intercept.pybuffer.buf = NULL;
|
|
__pyx_pybuffer_intercept.refcount = 0;
|
|
__pyx_pybuffernd_intercept.data = NULL;
|
|
__pyx_pybuffernd_intercept.rcbuffer = &__pyx_pybuffer_intercept;
|
|
__pyx_pybuffer_support.pybuffer.buf = NULL;
|
|
__pyx_pybuffer_support.refcount = 0;
|
|
__pyx_pybuffernd_support.data = NULL;
|
|
__pyx_pybuffernd_support.rcbuffer = &__pyx_pybuffer_support;
|
|
__pyx_pybuffer_support_vectors.pybuffer.buf = NULL;
|
|
__pyx_pybuffer_support_vectors.refcount = 0;
|
|
__pyx_pybuffernd_support_vectors.data = NULL;
|
|
__pyx_pybuffernd_support_vectors.rcbuffer = &__pyx_pybuffer_support_vectors;
|
|
__pyx_pybuffer_n_class_SV.pybuffer.buf = NULL;
|
|
__pyx_pybuffer_n_class_SV.refcount = 0;
|
|
__pyx_pybuffernd_n_class_SV.data = NULL;
|
|
__pyx_pybuffernd_n_class_SV.rcbuffer = &__pyx_pybuffer_n_class_SV;
|
|
__pyx_pybuffer_probA.pybuffer.buf = NULL;
|
|
__pyx_pybuffer_probA.refcount = 0;
|
|
__pyx_pybuffernd_probA.data = NULL;
|
|
__pyx_pybuffernd_probA.rcbuffer = &__pyx_pybuffer_probA;
|
|
__pyx_pybuffer_probB.pybuffer.buf = NULL;
|
|
__pyx_pybuffer_probB.refcount = 0;
|
|
__pyx_pybuffernd_probB.data = NULL;
|
|
__pyx_pybuffernd_probB.rcbuffer = &__pyx_pybuffer_probB;
|
|
__pyx_pybuffer_X.pybuffer.buf = NULL;
|
|
__pyx_pybuffer_X.refcount = 0;
|
|
__pyx_pybuffernd_X.data = NULL;
|
|
__pyx_pybuffernd_X.rcbuffer = &__pyx_pybuffer_X;
|
|
__pyx_pybuffer_Y.pybuffer.buf = NULL;
|
|
__pyx_pybuffer_Y.refcount = 0;
|
|
__pyx_pybuffernd_Y.data = NULL;
|
|
__pyx_pybuffernd_Y.rcbuffer = &__pyx_pybuffer_Y;
|
|
__pyx_pybuffer_class_weight.pybuffer.buf = NULL;
|
|
__pyx_pybuffer_class_weight.refcount = 0;
|
|
__pyx_pybuffernd_class_weight.data = NULL;
|
|
__pyx_pybuffernd_class_weight.rcbuffer = &__pyx_pybuffer_class_weight;
|
|
__pyx_pybuffer_sample_weight.pybuffer.buf = NULL;
|
|
__pyx_pybuffer_sample_weight.refcount = 0;
|
|
__pyx_pybuffernd_sample_weight.data = NULL;
|
|
__pyx_pybuffernd_sample_weight.rcbuffer = &__pyx_pybuffer_sample_weight;
|
|
{
|
|
__Pyx_BufFmt_StackElem __pyx_stack[1];
|
|
if (unlikely(__Pyx_GetBufferAndValidate(&__pyx_pybuffernd_X.rcbuffer->pybuffer, (PyObject*)__pyx_v_X, &__Pyx_TypeInfo_nn___pyx_t_5numpy_float64_t, PyBUF_FORMAT| PyBUF_C_CONTIGUOUS, 2, 0, __pyx_stack) == -1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 54; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
}
|
|
__pyx_pybuffernd_X.diminfo[0].strides = __pyx_pybuffernd_X.rcbuffer->pybuffer.strides[0]; __pyx_pybuffernd_X.diminfo[0].shape = __pyx_pybuffernd_X.rcbuffer->pybuffer.shape[0]; __pyx_pybuffernd_X.diminfo[1].strides = __pyx_pybuffernd_X.rcbuffer->pybuffer.strides[1]; __pyx_pybuffernd_X.diminfo[1].shape = __pyx_pybuffernd_X.rcbuffer->pybuffer.shape[1];
|
|
{
|
|
__Pyx_BufFmt_StackElem __pyx_stack[1];
|
|
if (unlikely(__Pyx_GetBufferAndValidate(&__pyx_pybuffernd_Y.rcbuffer->pybuffer, (PyObject*)__pyx_v_Y, &__Pyx_TypeInfo_nn___pyx_t_5numpy_float64_t, PyBUF_FORMAT| PyBUF_C_CONTIGUOUS, 1, 0, __pyx_stack) == -1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 54; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
}
|
|
__pyx_pybuffernd_Y.diminfo[0].strides = __pyx_pybuffernd_Y.rcbuffer->pybuffer.strides[0]; __pyx_pybuffernd_Y.diminfo[0].shape = __pyx_pybuffernd_Y.rcbuffer->pybuffer.shape[0];
|
|
{
|
|
__Pyx_BufFmt_StackElem __pyx_stack[1];
|
|
if (unlikely(__Pyx_GetBufferAndValidate(&__pyx_pybuffernd_class_weight.rcbuffer->pybuffer, (PyObject*)__pyx_v_class_weight, &__Pyx_TypeInfo_nn___pyx_t_5numpy_float64_t, PyBUF_FORMAT| PyBUF_C_CONTIGUOUS, 1, 0, __pyx_stack) == -1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 54; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
}
|
|
__pyx_pybuffernd_class_weight.diminfo[0].strides = __pyx_pybuffernd_class_weight.rcbuffer->pybuffer.strides[0]; __pyx_pybuffernd_class_weight.diminfo[0].shape = __pyx_pybuffernd_class_weight.rcbuffer->pybuffer.shape[0];
|
|
{
|
|
__Pyx_BufFmt_StackElem __pyx_stack[1];
|
|
if (unlikely(__Pyx_GetBufferAndValidate(&__pyx_pybuffernd_sample_weight.rcbuffer->pybuffer, (PyObject*)__pyx_v_sample_weight, &__Pyx_TypeInfo_nn___pyx_t_5numpy_float64_t, PyBUF_FORMAT| PyBUF_C_CONTIGUOUS, 1, 0, __pyx_stack) == -1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 54; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
}
|
|
__pyx_pybuffernd_sample_weight.diminfo[0].strides = __pyx_pybuffernd_sample_weight.rcbuffer->pybuffer.strides[0]; __pyx_pybuffernd_sample_weight.diminfo[0].shape = __pyx_pybuffernd_sample_weight.rcbuffer->pybuffer.shape[0];
|
|
|
|
/* "sklearn/svm/libsvm.pyx":163
|
|
*
|
|
*
|
|
* if len(sample_weight) == 0: # <<<<<<<<<<<<<<
|
|
* sample_weight = np.ones(X.shape[0], dtype=np.float64)
|
|
* else:
|
|
*/
|
|
__pyx_t_1 = PyObject_Length(((PyObject *)__pyx_v_sample_weight)); if (unlikely(__pyx_t_1 == -1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 163; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__pyx_t_2 = ((__pyx_t_1 == 0) != 0);
|
|
if (__pyx_t_2) {
|
|
|
|
/* "sklearn/svm/libsvm.pyx":164
|
|
*
|
|
* if len(sample_weight) == 0:
|
|
* sample_weight = np.ones(X.shape[0], dtype=np.float64) # <<<<<<<<<<<<<<
|
|
* else:
|
|
* assert sample_weight.shape[0] == X.shape[0], \
|
|
*/
|
|
__pyx_t_3 = __Pyx_GetModuleGlobalName(__pyx_n_s_np); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 164; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_3);
|
|
__pyx_t_4 = __Pyx_PyObject_GetAttrStr(__pyx_t_3, __pyx_n_s_ones); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 164; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_4);
|
|
__Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0;
|
|
__pyx_t_3 = __Pyx_PyInt_From_Py_intptr_t((__pyx_v_X->dimensions[0])); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 164; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_3);
|
|
__pyx_t_5 = PyTuple_New(1); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 164; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_5);
|
|
PyTuple_SET_ITEM(__pyx_t_5, 0, __pyx_t_3);
|
|
__Pyx_GIVEREF(__pyx_t_3);
|
|
__pyx_t_3 = 0;
|
|
__pyx_t_3 = PyDict_New(); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 164; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_3);
|
|
__pyx_t_6 = __Pyx_GetModuleGlobalName(__pyx_n_s_np); if (unlikely(!__pyx_t_6)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 164; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_6);
|
|
__pyx_t_7 = __Pyx_PyObject_GetAttrStr(__pyx_t_6, __pyx_n_s_float64); if (unlikely(!__pyx_t_7)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 164; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_7);
|
|
__Pyx_DECREF(__pyx_t_6); __pyx_t_6 = 0;
|
|
if (PyDict_SetItem(__pyx_t_3, __pyx_n_s_dtype, __pyx_t_7) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 164; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_DECREF(__pyx_t_7); __pyx_t_7 = 0;
|
|
__pyx_t_7 = __Pyx_PyObject_Call(__pyx_t_4, __pyx_t_5, __pyx_t_3); if (unlikely(!__pyx_t_7)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 164; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_7);
|
|
__Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0;
|
|
__Pyx_DECREF(__pyx_t_5); __pyx_t_5 = 0;
|
|
__Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0;
|
|
if (!(likely(((__pyx_t_7) == Py_None) || likely(__Pyx_TypeTest(__pyx_t_7, __pyx_ptype_5numpy_ndarray))))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 164; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__pyx_t_8 = ((PyArrayObject *)__pyx_t_7);
|
|
{
|
|
__Pyx_BufFmt_StackElem __pyx_stack[1];
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_sample_weight.rcbuffer->pybuffer);
|
|
__pyx_t_9 = __Pyx_GetBufferAndValidate(&__pyx_pybuffernd_sample_weight.rcbuffer->pybuffer, (PyObject*)__pyx_t_8, &__Pyx_TypeInfo_nn___pyx_t_5numpy_float64_t, PyBUF_FORMAT| PyBUF_C_CONTIGUOUS, 1, 0, __pyx_stack);
|
|
if (unlikely(__pyx_t_9 < 0)) {
|
|
PyErr_Fetch(&__pyx_t_10, &__pyx_t_11, &__pyx_t_12);
|
|
if (unlikely(__Pyx_GetBufferAndValidate(&__pyx_pybuffernd_sample_weight.rcbuffer->pybuffer, (PyObject*)__pyx_v_sample_weight, &__Pyx_TypeInfo_nn___pyx_t_5numpy_float64_t, PyBUF_FORMAT| PyBUF_C_CONTIGUOUS, 1, 0, __pyx_stack) == -1)) {
|
|
Py_XDECREF(__pyx_t_10); Py_XDECREF(__pyx_t_11); Py_XDECREF(__pyx_t_12);
|
|
__Pyx_RaiseBufferFallbackError();
|
|
} else {
|
|
PyErr_Restore(__pyx_t_10, __pyx_t_11, __pyx_t_12);
|
|
}
|
|
}
|
|
__pyx_pybuffernd_sample_weight.diminfo[0].strides = __pyx_pybuffernd_sample_weight.rcbuffer->pybuffer.strides[0]; __pyx_pybuffernd_sample_weight.diminfo[0].shape = __pyx_pybuffernd_sample_weight.rcbuffer->pybuffer.shape[0];
|
|
if (unlikely(__pyx_t_9 < 0)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 164; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
}
|
|
__pyx_t_8 = 0;
|
|
__Pyx_DECREF_SET(__pyx_v_sample_weight, ((PyArrayObject *)__pyx_t_7));
|
|
__pyx_t_7 = 0;
|
|
goto __pyx_L3;
|
|
}
|
|
/*else*/ {
|
|
|
|
/* "sklearn/svm/libsvm.pyx":166
|
|
* sample_weight = np.ones(X.shape[0], dtype=np.float64)
|
|
* else:
|
|
* assert sample_weight.shape[0] == X.shape[0], \ # <<<<<<<<<<<<<<
|
|
* "sample_weight and X have incompatible shapes: " + \
|
|
* "sample_weight has %s samples while X has %s" % \
|
|
*/
|
|
#ifndef CYTHON_WITHOUT_ASSERTIONS
|
|
if (unlikely(!Py_OptimizeFlag)) {
|
|
if (unlikely(!(((__pyx_v_sample_weight->dimensions[0]) == (__pyx_v_X->dimensions[0])) != 0))) {
|
|
|
|
/* "sklearn/svm/libsvm.pyx":169
|
|
* "sample_weight and X have incompatible shapes: " + \
|
|
* "sample_weight has %s samples while X has %s" % \
|
|
* (sample_weight.shape[0], X.shape[0]) # <<<<<<<<<<<<<<
|
|
*
|
|
* kernel_index = LIBSVM_KERNEL_TYPES.index(kernel)
|
|
*/
|
|
__pyx_t_7 = __Pyx_PyInt_From_Py_intptr_t((__pyx_v_sample_weight->dimensions[0])); if (unlikely(!__pyx_t_7)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 169; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_7);
|
|
__pyx_t_3 = __Pyx_PyInt_From_Py_intptr_t((__pyx_v_X->dimensions[0])); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 169; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_3);
|
|
__pyx_t_5 = PyTuple_New(2); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 169; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_5);
|
|
PyTuple_SET_ITEM(__pyx_t_5, 0, __pyx_t_7);
|
|
__Pyx_GIVEREF(__pyx_t_7);
|
|
PyTuple_SET_ITEM(__pyx_t_5, 1, __pyx_t_3);
|
|
__Pyx_GIVEREF(__pyx_t_3);
|
|
__pyx_t_7 = 0;
|
|
__pyx_t_3 = 0;
|
|
|
|
/* "sklearn/svm/libsvm.pyx":168
|
|
* assert sample_weight.shape[0] == X.shape[0], \
|
|
* "sample_weight and X have incompatible shapes: " + \
|
|
* "sample_weight has %s samples while X has %s" % \ # <<<<<<<<<<<<<<
|
|
* (sample_weight.shape[0], X.shape[0])
|
|
*
|
|
*/
|
|
__pyx_t_3 = __Pyx_PyString_Format(__pyx_kp_s_sample_weight_has_s_samples_whil, __pyx_t_5); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 168; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_3);
|
|
__Pyx_DECREF(__pyx_t_5); __pyx_t_5 = 0;
|
|
|
|
/* "sklearn/svm/libsvm.pyx":167
|
|
* else:
|
|
* assert sample_weight.shape[0] == X.shape[0], \
|
|
* "sample_weight and X have incompatible shapes: " + \ # <<<<<<<<<<<<<<
|
|
* "sample_weight has %s samples while X has %s" % \
|
|
* (sample_weight.shape[0], X.shape[0])
|
|
*/
|
|
__pyx_t_5 = PyNumber_Add(__pyx_kp_s_sample_weight_and_X_have_incompa, __pyx_t_3); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 167; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_5);
|
|
__Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0;
|
|
PyErr_SetObject(PyExc_AssertionError, __pyx_t_5);
|
|
__Pyx_DECREF(__pyx_t_5); __pyx_t_5 = 0;
|
|
{__pyx_filename = __pyx_f[0]; __pyx_lineno = 166; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
}
|
|
}
|
|
#endif
|
|
}
|
|
__pyx_L3:;
|
|
|
|
/* "sklearn/svm/libsvm.pyx":171
|
|
* (sample_weight.shape[0], X.shape[0])
|
|
*
|
|
* kernel_index = LIBSVM_KERNEL_TYPES.index(kernel) # <<<<<<<<<<<<<<
|
|
* set_problem(
|
|
* &problem, X.data, Y.data, sample_weight.data, X.shape, kernel_index)
|
|
*/
|
|
__pyx_t_5 = __Pyx_GetModuleGlobalName(__pyx_n_s_LIBSVM_KERNEL_TYPES); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 171; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_5);
|
|
__pyx_t_3 = __Pyx_PyObject_GetAttrStr(__pyx_t_5, __pyx_n_s_index); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 171; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_3);
|
|
__Pyx_DECREF(__pyx_t_5); __pyx_t_5 = 0;
|
|
__pyx_t_5 = PyTuple_New(1); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 171; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_5);
|
|
__Pyx_INCREF(__pyx_v_kernel);
|
|
PyTuple_SET_ITEM(__pyx_t_5, 0, __pyx_v_kernel);
|
|
__Pyx_GIVEREF(__pyx_v_kernel);
|
|
__pyx_t_7 = __Pyx_PyObject_Call(__pyx_t_3, __pyx_t_5, NULL); if (unlikely(!__pyx_t_7)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 171; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_7);
|
|
__Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0;
|
|
__Pyx_DECREF(__pyx_t_5); __pyx_t_5 = 0;
|
|
__pyx_v_kernel_index = __pyx_t_7;
|
|
__pyx_t_7 = 0;
|
|
|
|
/* "sklearn/svm/libsvm.pyx":173
|
|
* kernel_index = LIBSVM_KERNEL_TYPES.index(kernel)
|
|
* set_problem(
|
|
* &problem, X.data, Y.data, sample_weight.data, X.shape, kernel_index) # <<<<<<<<<<<<<<
|
|
* if problem.x == NULL:
|
|
* raise MemoryError("Seems we've run out of memory")
|
|
*/
|
|
__pyx_t_9 = __Pyx_PyInt_As_int(__pyx_v_kernel_index); if (unlikely((__pyx_t_9 == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 173; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
|
|
/* "sklearn/svm/libsvm.pyx":172
|
|
*
|
|
* kernel_index = LIBSVM_KERNEL_TYPES.index(kernel)
|
|
* set_problem( # <<<<<<<<<<<<<<
|
|
* &problem, X.data, Y.data, sample_weight.data, X.shape, kernel_index)
|
|
* if problem.x == NULL:
|
|
*/
|
|
set_problem((&__pyx_v_problem), __pyx_v_X->data, __pyx_v_Y->data, __pyx_v_sample_weight->data, __pyx_v_X->dimensions, __pyx_t_9);
|
|
|
|
/* "sklearn/svm/libsvm.pyx":174
|
|
* set_problem(
|
|
* &problem, X.data, Y.data, sample_weight.data, X.shape, kernel_index)
|
|
* if problem.x == NULL: # <<<<<<<<<<<<<<
|
|
* raise MemoryError("Seems we've run out of memory")
|
|
* cdef np.ndarray[np.int32_t, ndim=1, mode='c'] \
|
|
*/
|
|
__pyx_t_2 = ((__pyx_v_problem.x == NULL) != 0);
|
|
if (__pyx_t_2) {
|
|
|
|
/* "sklearn/svm/libsvm.pyx":175
|
|
* &problem, X.data, Y.data, sample_weight.data, X.shape, kernel_index)
|
|
* if problem.x == NULL:
|
|
* raise MemoryError("Seems we've run out of memory") # <<<<<<<<<<<<<<
|
|
* cdef np.ndarray[np.int32_t, ndim=1, mode='c'] \
|
|
* class_weight_label = np.arange(class_weight.shape[0], dtype=np.int32)
|
|
*/
|
|
__pyx_t_7 = __Pyx_PyObject_Call(__pyx_builtin_MemoryError, __pyx_tuple__3, NULL); if (unlikely(!__pyx_t_7)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 175; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_7);
|
|
__Pyx_Raise(__pyx_t_7, 0, 0, 0);
|
|
__Pyx_DECREF(__pyx_t_7); __pyx_t_7 = 0;
|
|
{__pyx_filename = __pyx_f[0]; __pyx_lineno = 175; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
}
|
|
|
|
/* "sklearn/svm/libsvm.pyx":177
|
|
* raise MemoryError("Seems we've run out of memory")
|
|
* cdef np.ndarray[np.int32_t, ndim=1, mode='c'] \
|
|
* class_weight_label = np.arange(class_weight.shape[0], dtype=np.int32) # <<<<<<<<<<<<<<
|
|
* set_parameter(
|
|
* ¶m, svm_type, kernel_index, degree, gamma, coef0, nu, cache_size,
|
|
*/
|
|
__pyx_t_7 = __Pyx_GetModuleGlobalName(__pyx_n_s_np); if (unlikely(!__pyx_t_7)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 177; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_7);
|
|
__pyx_t_5 = __Pyx_PyObject_GetAttrStr(__pyx_t_7, __pyx_n_s_arange); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 177; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_5);
|
|
__Pyx_DECREF(__pyx_t_7); __pyx_t_7 = 0;
|
|
__pyx_t_7 = __Pyx_PyInt_From_Py_intptr_t((__pyx_v_class_weight->dimensions[0])); if (unlikely(!__pyx_t_7)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 177; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_7);
|
|
__pyx_t_3 = PyTuple_New(1); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 177; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_3);
|
|
PyTuple_SET_ITEM(__pyx_t_3, 0, __pyx_t_7);
|
|
__Pyx_GIVEREF(__pyx_t_7);
|
|
__pyx_t_7 = 0;
|
|
__pyx_t_7 = PyDict_New(); if (unlikely(!__pyx_t_7)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 177; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_7);
|
|
__pyx_t_4 = __Pyx_GetModuleGlobalName(__pyx_n_s_np); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 177; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_4);
|
|
__pyx_t_6 = __Pyx_PyObject_GetAttrStr(__pyx_t_4, __pyx_n_s_int32); if (unlikely(!__pyx_t_6)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 177; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_6);
|
|
__Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0;
|
|
if (PyDict_SetItem(__pyx_t_7, __pyx_n_s_dtype, __pyx_t_6) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 177; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_DECREF(__pyx_t_6); __pyx_t_6 = 0;
|
|
__pyx_t_6 = __Pyx_PyObject_Call(__pyx_t_5, __pyx_t_3, __pyx_t_7); if (unlikely(!__pyx_t_6)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 177; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_6);
|
|
__Pyx_DECREF(__pyx_t_5); __pyx_t_5 = 0;
|
|
__Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0;
|
|
__Pyx_DECREF(__pyx_t_7); __pyx_t_7 = 0;
|
|
if (!(likely(((__pyx_t_6) == Py_None) || likely(__Pyx_TypeTest(__pyx_t_6, __pyx_ptype_5numpy_ndarray))))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 177; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__pyx_t_13 = ((PyArrayObject *)__pyx_t_6);
|
|
{
|
|
__Pyx_BufFmt_StackElem __pyx_stack[1];
|
|
if (unlikely(__Pyx_GetBufferAndValidate(&__pyx_pybuffernd_class_weight_label.rcbuffer->pybuffer, (PyObject*)__pyx_t_13, &__Pyx_TypeInfo_nn___pyx_t_5numpy_int32_t, PyBUF_FORMAT| PyBUF_C_CONTIGUOUS, 1, 0, __pyx_stack) == -1)) {
|
|
__pyx_v_class_weight_label = ((PyArrayObject *)Py_None); __Pyx_INCREF(Py_None); __pyx_pybuffernd_class_weight_label.rcbuffer->pybuffer.buf = NULL;
|
|
{__pyx_filename = __pyx_f[0]; __pyx_lineno = 176; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
} else {__pyx_pybuffernd_class_weight_label.diminfo[0].strides = __pyx_pybuffernd_class_weight_label.rcbuffer->pybuffer.strides[0]; __pyx_pybuffernd_class_weight_label.diminfo[0].shape = __pyx_pybuffernd_class_weight_label.rcbuffer->pybuffer.shape[0];
|
|
}
|
|
}
|
|
__pyx_t_13 = 0;
|
|
__pyx_v_class_weight_label = ((PyArrayObject *)__pyx_t_6);
|
|
__pyx_t_6 = 0;
|
|
|
|
/* "sklearn/svm/libsvm.pyx":179
|
|
* class_weight_label = np.arange(class_weight.shape[0], dtype=np.int32)
|
|
* set_parameter(
|
|
* ¶m, svm_type, kernel_index, degree, gamma, coef0, nu, cache_size, # <<<<<<<<<<<<<<
|
|
* C, tol, epsilon, shrinking, probability, <int> class_weight.shape[0],
|
|
* class_weight_label.data, class_weight.data, max_iter, random_seed)
|
|
*/
|
|
__pyx_t_9 = __Pyx_PyInt_As_int(__pyx_v_kernel_index); if (unlikely((__pyx_t_9 == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 179; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
|
|
/* "sklearn/svm/libsvm.pyx":178
|
|
* cdef np.ndarray[np.int32_t, ndim=1, mode='c'] \
|
|
* class_weight_label = np.arange(class_weight.shape[0], dtype=np.int32)
|
|
* set_parameter( # <<<<<<<<<<<<<<
|
|
* ¶m, svm_type, kernel_index, degree, gamma, coef0, nu, cache_size,
|
|
* C, tol, epsilon, shrinking, probability, <int> class_weight.shape[0],
|
|
*/
|
|
set_parameter((&__pyx_v_param), __pyx_v_svm_type, __pyx_t_9, __pyx_v_degree, __pyx_v_gamma, __pyx_v_coef0, __pyx_v_nu, __pyx_v_cache_size, __pyx_v_C, __pyx_v_tol, __pyx_v_epsilon, __pyx_v_shrinking, __pyx_v_probability, ((int)(__pyx_v_class_weight->dimensions[0])), __pyx_v_class_weight_label->data, __pyx_v_class_weight->data, __pyx_v_max_iter, __pyx_v_random_seed);
|
|
|
|
/* "sklearn/svm/libsvm.pyx":183
|
|
* class_weight_label.data, class_weight.data, max_iter, random_seed)
|
|
*
|
|
* error_msg = svm_check_parameter(&problem, ¶m) # <<<<<<<<<<<<<<
|
|
* if error_msg:
|
|
* # for SVR: epsilon is called p in libsvm
|
|
*/
|
|
__pyx_v_error_msg = svm_check_parameter((&__pyx_v_problem), (&__pyx_v_param));
|
|
|
|
/* "sklearn/svm/libsvm.pyx":184
|
|
*
|
|
* error_msg = svm_check_parameter(&problem, ¶m)
|
|
* if error_msg: # <<<<<<<<<<<<<<
|
|
* # for SVR: epsilon is called p in libsvm
|
|
* error_repl = error_msg.decode('utf-8').replace("p < 0", "epsilon < 0")
|
|
*/
|
|
__pyx_t_2 = (__pyx_v_error_msg != 0);
|
|
if (__pyx_t_2) {
|
|
|
|
/* "sklearn/svm/libsvm.pyx":186
|
|
* if error_msg:
|
|
* # for SVR: epsilon is called p in libsvm
|
|
* error_repl = error_msg.decode('utf-8').replace("p < 0", "epsilon < 0") # <<<<<<<<<<<<<<
|
|
* raise ValueError(error_repl)
|
|
*
|
|
*/
|
|
__pyx_t_6 = __Pyx_decode_c_string(__pyx_v_error_msg, 0, strlen(__pyx_v_error_msg), NULL, NULL, PyUnicode_DecodeUTF8); if (unlikely(!__pyx_t_6)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 186; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_6);
|
|
__pyx_t_7 = PyUnicode_Replace(((PyObject*)__pyx_t_6), __pyx_kp_s_p_0, __pyx_kp_s_epsilon_0, -1); if (unlikely(!__pyx_t_7)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 186; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_7);
|
|
__Pyx_DECREF(__pyx_t_6); __pyx_t_6 = 0;
|
|
__pyx_v_error_repl = __pyx_t_7;
|
|
__pyx_t_7 = 0;
|
|
|
|
/* "sklearn/svm/libsvm.pyx":187
|
|
* # for SVR: epsilon is called p in libsvm
|
|
* error_repl = error_msg.decode('utf-8').replace("p < 0", "epsilon < 0")
|
|
* raise ValueError(error_repl) # <<<<<<<<<<<<<<
|
|
*
|
|
* # this does the real work
|
|
*/
|
|
__pyx_t_7 = PyTuple_New(1); if (unlikely(!__pyx_t_7)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 187; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_7);
|
|
__Pyx_INCREF(__pyx_v_error_repl);
|
|
PyTuple_SET_ITEM(__pyx_t_7, 0, __pyx_v_error_repl);
|
|
__Pyx_GIVEREF(__pyx_v_error_repl);
|
|
__pyx_t_6 = __Pyx_PyObject_Call(__pyx_builtin_ValueError, __pyx_t_7, NULL); if (unlikely(!__pyx_t_6)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 187; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_6);
|
|
__Pyx_DECREF(__pyx_t_7); __pyx_t_7 = 0;
|
|
__Pyx_Raise(__pyx_t_6, 0, 0, 0);
|
|
__Pyx_DECREF(__pyx_t_6); __pyx_t_6 = 0;
|
|
{__pyx_filename = __pyx_f[0]; __pyx_lineno = 187; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
}
|
|
|
|
/* "sklearn/svm/libsvm.pyx":190
|
|
*
|
|
* # this does the real work
|
|
* cdef int fit_status = 0 # <<<<<<<<<<<<<<
|
|
* with nogil:
|
|
* model = svm_train(&problem, ¶m, &fit_status)
|
|
*/
|
|
__pyx_v_fit_status = 0;
|
|
|
|
/* "sklearn/svm/libsvm.pyx":191
|
|
* # this does the real work
|
|
* cdef int fit_status = 0
|
|
* with nogil: # <<<<<<<<<<<<<<
|
|
* model = svm_train(&problem, ¶m, &fit_status)
|
|
*
|
|
*/
|
|
{
|
|
#ifdef WITH_THREAD
|
|
PyThreadState *_save;
|
|
Py_UNBLOCK_THREADS
|
|
#endif
|
|
/*try:*/ {
|
|
|
|
/* "sklearn/svm/libsvm.pyx":192
|
|
* cdef int fit_status = 0
|
|
* with nogil:
|
|
* model = svm_train(&problem, ¶m, &fit_status) # <<<<<<<<<<<<<<
|
|
*
|
|
* # from here until the end, we just copy the data returned by
|
|
*/
|
|
__pyx_v_model = svm_train((&__pyx_v_problem), (&__pyx_v_param), (&__pyx_v_fit_status));
|
|
}
|
|
|
|
/* "sklearn/svm/libsvm.pyx":191
|
|
* # this does the real work
|
|
* cdef int fit_status = 0
|
|
* with nogil: # <<<<<<<<<<<<<<
|
|
* model = svm_train(&problem, ¶m, &fit_status)
|
|
*
|
|
*/
|
|
/*finally:*/ {
|
|
/*normal exit:*/{
|
|
#ifdef WITH_THREAD
|
|
Py_BLOCK_THREADS
|
|
#endif
|
|
goto __pyx_L8;
|
|
}
|
|
__pyx_L8:;
|
|
}
|
|
}
|
|
|
|
/* "sklearn/svm/libsvm.pyx":196
|
|
* # from here until the end, we just copy the data returned by
|
|
* # svm_train
|
|
* SV_len = get_l(model) # <<<<<<<<<<<<<<
|
|
* n_class = get_nr(model)
|
|
*
|
|
*/
|
|
__pyx_v_SV_len = get_l(__pyx_v_model);
|
|
|
|
/* "sklearn/svm/libsvm.pyx":197
|
|
* # svm_train
|
|
* SV_len = get_l(model)
|
|
* n_class = get_nr(model) # <<<<<<<<<<<<<<
|
|
*
|
|
* cdef np.ndarray[np.float64_t, ndim=2, mode='c'] sv_coef
|
|
*/
|
|
__pyx_t_6 = __Pyx_PyInt_From_Py_intptr_t(get_nr(__pyx_v_model)); if (unlikely(!__pyx_t_6)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 197; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_6);
|
|
__pyx_v_n_class = __pyx_t_6;
|
|
__pyx_t_6 = 0;
|
|
|
|
/* "sklearn/svm/libsvm.pyx":200
|
|
*
|
|
* cdef np.ndarray[np.float64_t, ndim=2, mode='c'] sv_coef
|
|
* sv_coef = np.empty((n_class-1, SV_len), dtype=np.float64) # <<<<<<<<<<<<<<
|
|
* copy_sv_coef (sv_coef.data, model)
|
|
*
|
|
*/
|
|
__pyx_t_6 = __Pyx_GetModuleGlobalName(__pyx_n_s_np); if (unlikely(!__pyx_t_6)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 200; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_6);
|
|
__pyx_t_7 = __Pyx_PyObject_GetAttrStr(__pyx_t_6, __pyx_n_s_empty); if (unlikely(!__pyx_t_7)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 200; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_7);
|
|
__Pyx_DECREF(__pyx_t_6); __pyx_t_6 = 0;
|
|
__pyx_t_6 = PyNumber_Subtract(__pyx_v_n_class, __pyx_int_1); if (unlikely(!__pyx_t_6)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 200; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_6);
|
|
__pyx_t_3 = __Pyx_PyInt_From_Py_intptr_t(__pyx_v_SV_len); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 200; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_3);
|
|
__pyx_t_5 = PyTuple_New(2); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 200; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_5);
|
|
PyTuple_SET_ITEM(__pyx_t_5, 0, __pyx_t_6);
|
|
__Pyx_GIVEREF(__pyx_t_6);
|
|
PyTuple_SET_ITEM(__pyx_t_5, 1, __pyx_t_3);
|
|
__Pyx_GIVEREF(__pyx_t_3);
|
|
__pyx_t_6 = 0;
|
|
__pyx_t_3 = 0;
|
|
__pyx_t_3 = PyTuple_New(1); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 200; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_3);
|
|
PyTuple_SET_ITEM(__pyx_t_3, 0, __pyx_t_5);
|
|
__Pyx_GIVEREF(__pyx_t_5);
|
|
__pyx_t_5 = 0;
|
|
__pyx_t_5 = PyDict_New(); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 200; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_5);
|
|
__pyx_t_6 = __Pyx_GetModuleGlobalName(__pyx_n_s_np); if (unlikely(!__pyx_t_6)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 200; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_6);
|
|
__pyx_t_4 = __Pyx_PyObject_GetAttrStr(__pyx_t_6, __pyx_n_s_float64); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 200; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_4);
|
|
__Pyx_DECREF(__pyx_t_6); __pyx_t_6 = 0;
|
|
if (PyDict_SetItem(__pyx_t_5, __pyx_n_s_dtype, __pyx_t_4) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 200; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0;
|
|
__pyx_t_4 = __Pyx_PyObject_Call(__pyx_t_7, __pyx_t_3, __pyx_t_5); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 200; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_4);
|
|
__Pyx_DECREF(__pyx_t_7); __pyx_t_7 = 0;
|
|
__Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0;
|
|
__Pyx_DECREF(__pyx_t_5); __pyx_t_5 = 0;
|
|
if (!(likely(((__pyx_t_4) == Py_None) || likely(__Pyx_TypeTest(__pyx_t_4, __pyx_ptype_5numpy_ndarray))))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 200; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__pyx_t_14 = ((PyArrayObject *)__pyx_t_4);
|
|
{
|
|
__Pyx_BufFmt_StackElem __pyx_stack[1];
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_sv_coef.rcbuffer->pybuffer);
|
|
__pyx_t_9 = __Pyx_GetBufferAndValidate(&__pyx_pybuffernd_sv_coef.rcbuffer->pybuffer, (PyObject*)__pyx_t_14, &__Pyx_TypeInfo_nn___pyx_t_5numpy_float64_t, PyBUF_FORMAT| PyBUF_C_CONTIGUOUS, 2, 0, __pyx_stack);
|
|
if (unlikely(__pyx_t_9 < 0)) {
|
|
PyErr_Fetch(&__pyx_t_12, &__pyx_t_11, &__pyx_t_10);
|
|
if (unlikely(__Pyx_GetBufferAndValidate(&__pyx_pybuffernd_sv_coef.rcbuffer->pybuffer, (PyObject*)__pyx_v_sv_coef, &__Pyx_TypeInfo_nn___pyx_t_5numpy_float64_t, PyBUF_FORMAT| PyBUF_C_CONTIGUOUS, 2, 0, __pyx_stack) == -1)) {
|
|
Py_XDECREF(__pyx_t_12); Py_XDECREF(__pyx_t_11); Py_XDECREF(__pyx_t_10);
|
|
__Pyx_RaiseBufferFallbackError();
|
|
} else {
|
|
PyErr_Restore(__pyx_t_12, __pyx_t_11, __pyx_t_10);
|
|
}
|
|
}
|
|
__pyx_pybuffernd_sv_coef.diminfo[0].strides = __pyx_pybuffernd_sv_coef.rcbuffer->pybuffer.strides[0]; __pyx_pybuffernd_sv_coef.diminfo[0].shape = __pyx_pybuffernd_sv_coef.rcbuffer->pybuffer.shape[0]; __pyx_pybuffernd_sv_coef.diminfo[1].strides = __pyx_pybuffernd_sv_coef.rcbuffer->pybuffer.strides[1]; __pyx_pybuffernd_sv_coef.diminfo[1].shape = __pyx_pybuffernd_sv_coef.rcbuffer->pybuffer.shape[1];
|
|
if (unlikely(__pyx_t_9 < 0)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 200; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
}
|
|
__pyx_t_14 = 0;
|
|
__pyx_v_sv_coef = ((PyArrayObject *)__pyx_t_4);
|
|
__pyx_t_4 = 0;
|
|
|
|
/* "sklearn/svm/libsvm.pyx":201
|
|
* cdef np.ndarray[np.float64_t, ndim=2, mode='c'] sv_coef
|
|
* sv_coef = np.empty((n_class-1, SV_len), dtype=np.float64)
|
|
* copy_sv_coef (sv_coef.data, model) # <<<<<<<<<<<<<<
|
|
*
|
|
* # the intercept is just model.rho but with sign changed
|
|
*/
|
|
copy_sv_coef(__pyx_v_sv_coef->data, __pyx_v_model);
|
|
|
|
/* "sklearn/svm/libsvm.pyx":205
|
|
* # the intercept is just model.rho but with sign changed
|
|
* cdef np.ndarray[np.float64_t, ndim=1, mode='c'] intercept
|
|
* intercept = np.empty(int((n_class*(n_class-1))/2), dtype=np.float64) # <<<<<<<<<<<<<<
|
|
* copy_intercept (intercept.data, model, intercept.shape)
|
|
*
|
|
*/
|
|
__pyx_t_4 = __Pyx_GetModuleGlobalName(__pyx_n_s_np); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 205; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_4);
|
|
__pyx_t_5 = __Pyx_PyObject_GetAttrStr(__pyx_t_4, __pyx_n_s_empty); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 205; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_5);
|
|
__Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0;
|
|
__pyx_t_4 = PyNumber_Subtract(__pyx_v_n_class, __pyx_int_1); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 205; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_4);
|
|
__pyx_t_3 = PyNumber_Multiply(__pyx_v_n_class, __pyx_t_4); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 205; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_3);
|
|
__Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0;
|
|
__pyx_t_4 = __Pyx_PyNumber_Divide(__pyx_t_3, __pyx_int_2); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 205; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_4);
|
|
__Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0;
|
|
__pyx_t_3 = PyNumber_Int(__pyx_t_4); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 205; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_3);
|
|
__Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0;
|
|
__pyx_t_4 = PyTuple_New(1); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 205; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_4);
|
|
PyTuple_SET_ITEM(__pyx_t_4, 0, __pyx_t_3);
|
|
__Pyx_GIVEREF(__pyx_t_3);
|
|
__pyx_t_3 = 0;
|
|
__pyx_t_3 = PyDict_New(); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 205; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_3);
|
|
__pyx_t_7 = __Pyx_GetModuleGlobalName(__pyx_n_s_np); if (unlikely(!__pyx_t_7)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 205; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_7);
|
|
__pyx_t_6 = __Pyx_PyObject_GetAttrStr(__pyx_t_7, __pyx_n_s_float64); if (unlikely(!__pyx_t_6)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 205; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_6);
|
|
__Pyx_DECREF(__pyx_t_7); __pyx_t_7 = 0;
|
|
if (PyDict_SetItem(__pyx_t_3, __pyx_n_s_dtype, __pyx_t_6) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 205; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_DECREF(__pyx_t_6); __pyx_t_6 = 0;
|
|
__pyx_t_6 = __Pyx_PyObject_Call(__pyx_t_5, __pyx_t_4, __pyx_t_3); if (unlikely(!__pyx_t_6)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 205; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_6);
|
|
__Pyx_DECREF(__pyx_t_5); __pyx_t_5 = 0;
|
|
__Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0;
|
|
__Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0;
|
|
if (!(likely(((__pyx_t_6) == Py_None) || likely(__Pyx_TypeTest(__pyx_t_6, __pyx_ptype_5numpy_ndarray))))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 205; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__pyx_t_15 = ((PyArrayObject *)__pyx_t_6);
|
|
{
|
|
__Pyx_BufFmt_StackElem __pyx_stack[1];
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_intercept.rcbuffer->pybuffer);
|
|
__pyx_t_9 = __Pyx_GetBufferAndValidate(&__pyx_pybuffernd_intercept.rcbuffer->pybuffer, (PyObject*)__pyx_t_15, &__Pyx_TypeInfo_nn___pyx_t_5numpy_float64_t, PyBUF_FORMAT| PyBUF_C_CONTIGUOUS, 1, 0, __pyx_stack);
|
|
if (unlikely(__pyx_t_9 < 0)) {
|
|
PyErr_Fetch(&__pyx_t_10, &__pyx_t_11, &__pyx_t_12);
|
|
if (unlikely(__Pyx_GetBufferAndValidate(&__pyx_pybuffernd_intercept.rcbuffer->pybuffer, (PyObject*)__pyx_v_intercept, &__Pyx_TypeInfo_nn___pyx_t_5numpy_float64_t, PyBUF_FORMAT| PyBUF_C_CONTIGUOUS, 1, 0, __pyx_stack) == -1)) {
|
|
Py_XDECREF(__pyx_t_10); Py_XDECREF(__pyx_t_11); Py_XDECREF(__pyx_t_12);
|
|
__Pyx_RaiseBufferFallbackError();
|
|
} else {
|
|
PyErr_Restore(__pyx_t_10, __pyx_t_11, __pyx_t_12);
|
|
}
|
|
}
|
|
__pyx_pybuffernd_intercept.diminfo[0].strides = __pyx_pybuffernd_intercept.rcbuffer->pybuffer.strides[0]; __pyx_pybuffernd_intercept.diminfo[0].shape = __pyx_pybuffernd_intercept.rcbuffer->pybuffer.shape[0];
|
|
if (unlikely(__pyx_t_9 < 0)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 205; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
}
|
|
__pyx_t_15 = 0;
|
|
__pyx_v_intercept = ((PyArrayObject *)__pyx_t_6);
|
|
__pyx_t_6 = 0;
|
|
|
|
/* "sklearn/svm/libsvm.pyx":206
|
|
* cdef np.ndarray[np.float64_t, ndim=1, mode='c'] intercept
|
|
* intercept = np.empty(int((n_class*(n_class-1))/2), dtype=np.float64)
|
|
* copy_intercept (intercept.data, model, intercept.shape) # <<<<<<<<<<<<<<
|
|
*
|
|
* cdef np.ndarray[np.int32_t, ndim=1, mode='c'] support
|
|
*/
|
|
copy_intercept(__pyx_v_intercept->data, __pyx_v_model, __pyx_v_intercept->dimensions);
|
|
|
|
/* "sklearn/svm/libsvm.pyx":209
|
|
*
|
|
* cdef np.ndarray[np.int32_t, ndim=1, mode='c'] support
|
|
* support = np.empty (SV_len, dtype=np.int32) # <<<<<<<<<<<<<<
|
|
* copy_support (support.data, model)
|
|
*
|
|
*/
|
|
__pyx_t_6 = __Pyx_GetModuleGlobalName(__pyx_n_s_np); if (unlikely(!__pyx_t_6)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 209; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_6);
|
|
__pyx_t_3 = __Pyx_PyObject_GetAttrStr(__pyx_t_6, __pyx_n_s_empty); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 209; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_3);
|
|
__Pyx_DECREF(__pyx_t_6); __pyx_t_6 = 0;
|
|
__pyx_t_6 = __Pyx_PyInt_From_Py_intptr_t(__pyx_v_SV_len); if (unlikely(!__pyx_t_6)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 209; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_6);
|
|
__pyx_t_4 = PyTuple_New(1); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 209; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_4);
|
|
PyTuple_SET_ITEM(__pyx_t_4, 0, __pyx_t_6);
|
|
__Pyx_GIVEREF(__pyx_t_6);
|
|
__pyx_t_6 = 0;
|
|
__pyx_t_6 = PyDict_New(); if (unlikely(!__pyx_t_6)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 209; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_6);
|
|
__pyx_t_5 = __Pyx_GetModuleGlobalName(__pyx_n_s_np); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 209; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_5);
|
|
__pyx_t_7 = __Pyx_PyObject_GetAttrStr(__pyx_t_5, __pyx_n_s_int32); if (unlikely(!__pyx_t_7)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 209; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_7);
|
|
__Pyx_DECREF(__pyx_t_5); __pyx_t_5 = 0;
|
|
if (PyDict_SetItem(__pyx_t_6, __pyx_n_s_dtype, __pyx_t_7) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 209; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_DECREF(__pyx_t_7); __pyx_t_7 = 0;
|
|
__pyx_t_7 = __Pyx_PyObject_Call(__pyx_t_3, __pyx_t_4, __pyx_t_6); if (unlikely(!__pyx_t_7)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 209; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_7);
|
|
__Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0;
|
|
__Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0;
|
|
__Pyx_DECREF(__pyx_t_6); __pyx_t_6 = 0;
|
|
if (!(likely(((__pyx_t_7) == Py_None) || likely(__Pyx_TypeTest(__pyx_t_7, __pyx_ptype_5numpy_ndarray))))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 209; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__pyx_t_16 = ((PyArrayObject *)__pyx_t_7);
|
|
{
|
|
__Pyx_BufFmt_StackElem __pyx_stack[1];
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_support.rcbuffer->pybuffer);
|
|
__pyx_t_9 = __Pyx_GetBufferAndValidate(&__pyx_pybuffernd_support.rcbuffer->pybuffer, (PyObject*)__pyx_t_16, &__Pyx_TypeInfo_nn___pyx_t_5numpy_int32_t, PyBUF_FORMAT| PyBUF_C_CONTIGUOUS, 1, 0, __pyx_stack);
|
|
if (unlikely(__pyx_t_9 < 0)) {
|
|
PyErr_Fetch(&__pyx_t_12, &__pyx_t_11, &__pyx_t_10);
|
|
if (unlikely(__Pyx_GetBufferAndValidate(&__pyx_pybuffernd_support.rcbuffer->pybuffer, (PyObject*)__pyx_v_support, &__Pyx_TypeInfo_nn___pyx_t_5numpy_int32_t, PyBUF_FORMAT| PyBUF_C_CONTIGUOUS, 1, 0, __pyx_stack) == -1)) {
|
|
Py_XDECREF(__pyx_t_12); Py_XDECREF(__pyx_t_11); Py_XDECREF(__pyx_t_10);
|
|
__Pyx_RaiseBufferFallbackError();
|
|
} else {
|
|
PyErr_Restore(__pyx_t_12, __pyx_t_11, __pyx_t_10);
|
|
}
|
|
}
|
|
__pyx_pybuffernd_support.diminfo[0].strides = __pyx_pybuffernd_support.rcbuffer->pybuffer.strides[0]; __pyx_pybuffernd_support.diminfo[0].shape = __pyx_pybuffernd_support.rcbuffer->pybuffer.shape[0];
|
|
if (unlikely(__pyx_t_9 < 0)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 209; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
}
|
|
__pyx_t_16 = 0;
|
|
__pyx_v_support = ((PyArrayObject *)__pyx_t_7);
|
|
__pyx_t_7 = 0;
|
|
|
|
/* "sklearn/svm/libsvm.pyx":210
|
|
* cdef np.ndarray[np.int32_t, ndim=1, mode='c'] support
|
|
* support = np.empty (SV_len, dtype=np.int32)
|
|
* copy_support (support.data, model) # <<<<<<<<<<<<<<
|
|
*
|
|
* # copy model.SV
|
|
*/
|
|
copy_support(__pyx_v_support->data, __pyx_v_model);
|
|
|
|
/* "sklearn/svm/libsvm.pyx":214
|
|
* # copy model.SV
|
|
* cdef np.ndarray[np.float64_t, ndim=2, mode='c'] support_vectors
|
|
* if kernel_index == 4: # <<<<<<<<<<<<<<
|
|
* # precomputed kernel
|
|
* support_vectors = np.empty((0, 0), dtype=np.float64)
|
|
*/
|
|
__pyx_t_7 = PyObject_RichCompare(__pyx_v_kernel_index, __pyx_int_4, Py_EQ); __Pyx_XGOTREF(__pyx_t_7); if (unlikely(!__pyx_t_7)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 214; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__pyx_t_2 = __Pyx_PyObject_IsTrue(__pyx_t_7); if (unlikely(__pyx_t_2 < 0)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 214; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_DECREF(__pyx_t_7); __pyx_t_7 = 0;
|
|
if (__pyx_t_2) {
|
|
|
|
/* "sklearn/svm/libsvm.pyx":216
|
|
* if kernel_index == 4:
|
|
* # precomputed kernel
|
|
* support_vectors = np.empty((0, 0), dtype=np.float64) # <<<<<<<<<<<<<<
|
|
* else:
|
|
* support_vectors = np.empty((SV_len, X.shape[1]), dtype=np.float64)
|
|
*/
|
|
__pyx_t_7 = __Pyx_GetModuleGlobalName(__pyx_n_s_np); if (unlikely(!__pyx_t_7)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 216; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_7);
|
|
__pyx_t_6 = __Pyx_PyObject_GetAttrStr(__pyx_t_7, __pyx_n_s_empty); if (unlikely(!__pyx_t_6)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 216; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_6);
|
|
__Pyx_DECREF(__pyx_t_7); __pyx_t_7 = 0;
|
|
__pyx_t_7 = PyDict_New(); if (unlikely(!__pyx_t_7)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 216; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_7);
|
|
__pyx_t_4 = __Pyx_GetModuleGlobalName(__pyx_n_s_np); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 216; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_4);
|
|
__pyx_t_3 = __Pyx_PyObject_GetAttrStr(__pyx_t_4, __pyx_n_s_float64); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 216; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_3);
|
|
__Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0;
|
|
if (PyDict_SetItem(__pyx_t_7, __pyx_n_s_dtype, __pyx_t_3) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 216; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0;
|
|
__pyx_t_3 = __Pyx_PyObject_Call(__pyx_t_6, __pyx_tuple__5, __pyx_t_7); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 216; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_3);
|
|
__Pyx_DECREF(__pyx_t_6); __pyx_t_6 = 0;
|
|
__Pyx_DECREF(__pyx_t_7); __pyx_t_7 = 0;
|
|
if (!(likely(((__pyx_t_3) == Py_None) || likely(__Pyx_TypeTest(__pyx_t_3, __pyx_ptype_5numpy_ndarray))))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 216; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__pyx_t_17 = ((PyArrayObject *)__pyx_t_3);
|
|
{
|
|
__Pyx_BufFmt_StackElem __pyx_stack[1];
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_support_vectors.rcbuffer->pybuffer);
|
|
__pyx_t_9 = __Pyx_GetBufferAndValidate(&__pyx_pybuffernd_support_vectors.rcbuffer->pybuffer, (PyObject*)__pyx_t_17, &__Pyx_TypeInfo_nn___pyx_t_5numpy_float64_t, PyBUF_FORMAT| PyBUF_C_CONTIGUOUS, 2, 0, __pyx_stack);
|
|
if (unlikely(__pyx_t_9 < 0)) {
|
|
PyErr_Fetch(&__pyx_t_10, &__pyx_t_11, &__pyx_t_12);
|
|
if (unlikely(__Pyx_GetBufferAndValidate(&__pyx_pybuffernd_support_vectors.rcbuffer->pybuffer, (PyObject*)__pyx_v_support_vectors, &__Pyx_TypeInfo_nn___pyx_t_5numpy_float64_t, PyBUF_FORMAT| PyBUF_C_CONTIGUOUS, 2, 0, __pyx_stack) == -1)) {
|
|
Py_XDECREF(__pyx_t_10); Py_XDECREF(__pyx_t_11); Py_XDECREF(__pyx_t_12);
|
|
__Pyx_RaiseBufferFallbackError();
|
|
} else {
|
|
PyErr_Restore(__pyx_t_10, __pyx_t_11, __pyx_t_12);
|
|
}
|
|
}
|
|
__pyx_pybuffernd_support_vectors.diminfo[0].strides = __pyx_pybuffernd_support_vectors.rcbuffer->pybuffer.strides[0]; __pyx_pybuffernd_support_vectors.diminfo[0].shape = __pyx_pybuffernd_support_vectors.rcbuffer->pybuffer.shape[0]; __pyx_pybuffernd_support_vectors.diminfo[1].strides = __pyx_pybuffernd_support_vectors.rcbuffer->pybuffer.strides[1]; __pyx_pybuffernd_support_vectors.diminfo[1].shape = __pyx_pybuffernd_support_vectors.rcbuffer->pybuffer.shape[1];
|
|
if (unlikely(__pyx_t_9 < 0)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 216; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
}
|
|
__pyx_t_17 = 0;
|
|
__pyx_v_support_vectors = ((PyArrayObject *)__pyx_t_3);
|
|
__pyx_t_3 = 0;
|
|
goto __pyx_L9;
|
|
}
|
|
/*else*/ {
|
|
|
|
/* "sklearn/svm/libsvm.pyx":218
|
|
* support_vectors = np.empty((0, 0), dtype=np.float64)
|
|
* else:
|
|
* support_vectors = np.empty((SV_len, X.shape[1]), dtype=np.float64) # <<<<<<<<<<<<<<
|
|
* copy_SV(support_vectors.data, model, support_vectors.shape)
|
|
*
|
|
*/
|
|
__pyx_t_3 = __Pyx_GetModuleGlobalName(__pyx_n_s_np); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 218; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_3);
|
|
__pyx_t_7 = __Pyx_PyObject_GetAttrStr(__pyx_t_3, __pyx_n_s_empty); if (unlikely(!__pyx_t_7)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 218; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_7);
|
|
__Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0;
|
|
__pyx_t_3 = __Pyx_PyInt_From_Py_intptr_t(__pyx_v_SV_len); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 218; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_3);
|
|
__pyx_t_6 = __Pyx_PyInt_From_Py_intptr_t((__pyx_v_X->dimensions[1])); if (unlikely(!__pyx_t_6)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 218; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_6);
|
|
__pyx_t_4 = PyTuple_New(2); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 218; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_4);
|
|
PyTuple_SET_ITEM(__pyx_t_4, 0, __pyx_t_3);
|
|
__Pyx_GIVEREF(__pyx_t_3);
|
|
PyTuple_SET_ITEM(__pyx_t_4, 1, __pyx_t_6);
|
|
__Pyx_GIVEREF(__pyx_t_6);
|
|
__pyx_t_3 = 0;
|
|
__pyx_t_6 = 0;
|
|
__pyx_t_6 = PyTuple_New(1); if (unlikely(!__pyx_t_6)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 218; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_6);
|
|
PyTuple_SET_ITEM(__pyx_t_6, 0, __pyx_t_4);
|
|
__Pyx_GIVEREF(__pyx_t_4);
|
|
__pyx_t_4 = 0;
|
|
__pyx_t_4 = PyDict_New(); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 218; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_4);
|
|
__pyx_t_3 = __Pyx_GetModuleGlobalName(__pyx_n_s_np); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 218; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_3);
|
|
__pyx_t_5 = __Pyx_PyObject_GetAttrStr(__pyx_t_3, __pyx_n_s_float64); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 218; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_5);
|
|
__Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0;
|
|
if (PyDict_SetItem(__pyx_t_4, __pyx_n_s_dtype, __pyx_t_5) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 218; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_DECREF(__pyx_t_5); __pyx_t_5 = 0;
|
|
__pyx_t_5 = __Pyx_PyObject_Call(__pyx_t_7, __pyx_t_6, __pyx_t_4); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 218; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_5);
|
|
__Pyx_DECREF(__pyx_t_7); __pyx_t_7 = 0;
|
|
__Pyx_DECREF(__pyx_t_6); __pyx_t_6 = 0;
|
|
__Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0;
|
|
if (!(likely(((__pyx_t_5) == Py_None) || likely(__Pyx_TypeTest(__pyx_t_5, __pyx_ptype_5numpy_ndarray))))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 218; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__pyx_t_17 = ((PyArrayObject *)__pyx_t_5);
|
|
{
|
|
__Pyx_BufFmt_StackElem __pyx_stack[1];
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_support_vectors.rcbuffer->pybuffer);
|
|
__pyx_t_9 = __Pyx_GetBufferAndValidate(&__pyx_pybuffernd_support_vectors.rcbuffer->pybuffer, (PyObject*)__pyx_t_17, &__Pyx_TypeInfo_nn___pyx_t_5numpy_float64_t, PyBUF_FORMAT| PyBUF_C_CONTIGUOUS, 2, 0, __pyx_stack);
|
|
if (unlikely(__pyx_t_9 < 0)) {
|
|
PyErr_Fetch(&__pyx_t_12, &__pyx_t_11, &__pyx_t_10);
|
|
if (unlikely(__Pyx_GetBufferAndValidate(&__pyx_pybuffernd_support_vectors.rcbuffer->pybuffer, (PyObject*)__pyx_v_support_vectors, &__Pyx_TypeInfo_nn___pyx_t_5numpy_float64_t, PyBUF_FORMAT| PyBUF_C_CONTIGUOUS, 2, 0, __pyx_stack) == -1)) {
|
|
Py_XDECREF(__pyx_t_12); Py_XDECREF(__pyx_t_11); Py_XDECREF(__pyx_t_10);
|
|
__Pyx_RaiseBufferFallbackError();
|
|
} else {
|
|
PyErr_Restore(__pyx_t_12, __pyx_t_11, __pyx_t_10);
|
|
}
|
|
}
|
|
__pyx_pybuffernd_support_vectors.diminfo[0].strides = __pyx_pybuffernd_support_vectors.rcbuffer->pybuffer.strides[0]; __pyx_pybuffernd_support_vectors.diminfo[0].shape = __pyx_pybuffernd_support_vectors.rcbuffer->pybuffer.shape[0]; __pyx_pybuffernd_support_vectors.diminfo[1].strides = __pyx_pybuffernd_support_vectors.rcbuffer->pybuffer.strides[1]; __pyx_pybuffernd_support_vectors.diminfo[1].shape = __pyx_pybuffernd_support_vectors.rcbuffer->pybuffer.shape[1];
|
|
if (unlikely(__pyx_t_9 < 0)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 218; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
}
|
|
__pyx_t_17 = 0;
|
|
__pyx_v_support_vectors = ((PyArrayObject *)__pyx_t_5);
|
|
__pyx_t_5 = 0;
|
|
|
|
/* "sklearn/svm/libsvm.pyx":219
|
|
* else:
|
|
* support_vectors = np.empty((SV_len, X.shape[1]), dtype=np.float64)
|
|
* copy_SV(support_vectors.data, model, support_vectors.shape) # <<<<<<<<<<<<<<
|
|
*
|
|
* # TODO: do only in classification
|
|
*/
|
|
copy_SV(__pyx_v_support_vectors->data, __pyx_v_model, __pyx_v_support_vectors->dimensions);
|
|
}
|
|
__pyx_L9:;
|
|
|
|
/* "sklearn/svm/libsvm.pyx":223
|
|
* # TODO: do only in classification
|
|
* cdef np.ndarray[np.int32_t, ndim=1, mode='c'] n_class_SV
|
|
* n_class_SV = np.empty(n_class, dtype=np.int32) # <<<<<<<<<<<<<<
|
|
* copy_nSV(n_class_SV.data, model)
|
|
*
|
|
*/
|
|
__pyx_t_5 = __Pyx_GetModuleGlobalName(__pyx_n_s_np); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 223; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_5);
|
|
__pyx_t_4 = __Pyx_PyObject_GetAttrStr(__pyx_t_5, __pyx_n_s_empty); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 223; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_4);
|
|
__Pyx_DECREF(__pyx_t_5); __pyx_t_5 = 0;
|
|
__pyx_t_5 = PyTuple_New(1); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 223; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_5);
|
|
__Pyx_INCREF(__pyx_v_n_class);
|
|
PyTuple_SET_ITEM(__pyx_t_5, 0, __pyx_v_n_class);
|
|
__Pyx_GIVEREF(__pyx_v_n_class);
|
|
__pyx_t_6 = PyDict_New(); if (unlikely(!__pyx_t_6)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 223; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_6);
|
|
__pyx_t_7 = __Pyx_GetModuleGlobalName(__pyx_n_s_np); if (unlikely(!__pyx_t_7)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 223; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_7);
|
|
__pyx_t_3 = __Pyx_PyObject_GetAttrStr(__pyx_t_7, __pyx_n_s_int32); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 223; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_3);
|
|
__Pyx_DECREF(__pyx_t_7); __pyx_t_7 = 0;
|
|
if (PyDict_SetItem(__pyx_t_6, __pyx_n_s_dtype, __pyx_t_3) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 223; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0;
|
|
__pyx_t_3 = __Pyx_PyObject_Call(__pyx_t_4, __pyx_t_5, __pyx_t_6); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 223; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_3);
|
|
__Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0;
|
|
__Pyx_DECREF(__pyx_t_5); __pyx_t_5 = 0;
|
|
__Pyx_DECREF(__pyx_t_6); __pyx_t_6 = 0;
|
|
if (!(likely(((__pyx_t_3) == Py_None) || likely(__Pyx_TypeTest(__pyx_t_3, __pyx_ptype_5numpy_ndarray))))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 223; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__pyx_t_18 = ((PyArrayObject *)__pyx_t_3);
|
|
{
|
|
__Pyx_BufFmt_StackElem __pyx_stack[1];
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_n_class_SV.rcbuffer->pybuffer);
|
|
__pyx_t_9 = __Pyx_GetBufferAndValidate(&__pyx_pybuffernd_n_class_SV.rcbuffer->pybuffer, (PyObject*)__pyx_t_18, &__Pyx_TypeInfo_nn___pyx_t_5numpy_int32_t, PyBUF_FORMAT| PyBUF_C_CONTIGUOUS, 1, 0, __pyx_stack);
|
|
if (unlikely(__pyx_t_9 < 0)) {
|
|
PyErr_Fetch(&__pyx_t_10, &__pyx_t_11, &__pyx_t_12);
|
|
if (unlikely(__Pyx_GetBufferAndValidate(&__pyx_pybuffernd_n_class_SV.rcbuffer->pybuffer, (PyObject*)__pyx_v_n_class_SV, &__Pyx_TypeInfo_nn___pyx_t_5numpy_int32_t, PyBUF_FORMAT| PyBUF_C_CONTIGUOUS, 1, 0, __pyx_stack) == -1)) {
|
|
Py_XDECREF(__pyx_t_10); Py_XDECREF(__pyx_t_11); Py_XDECREF(__pyx_t_12);
|
|
__Pyx_RaiseBufferFallbackError();
|
|
} else {
|
|
PyErr_Restore(__pyx_t_10, __pyx_t_11, __pyx_t_12);
|
|
}
|
|
}
|
|
__pyx_pybuffernd_n_class_SV.diminfo[0].strides = __pyx_pybuffernd_n_class_SV.rcbuffer->pybuffer.strides[0]; __pyx_pybuffernd_n_class_SV.diminfo[0].shape = __pyx_pybuffernd_n_class_SV.rcbuffer->pybuffer.shape[0];
|
|
if (unlikely(__pyx_t_9 < 0)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 223; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
}
|
|
__pyx_t_18 = 0;
|
|
__pyx_v_n_class_SV = ((PyArrayObject *)__pyx_t_3);
|
|
__pyx_t_3 = 0;
|
|
|
|
/* "sklearn/svm/libsvm.pyx":224
|
|
* cdef np.ndarray[np.int32_t, ndim=1, mode='c'] n_class_SV
|
|
* n_class_SV = np.empty(n_class, dtype=np.int32)
|
|
* copy_nSV(n_class_SV.data, model) # <<<<<<<<<<<<<<
|
|
*
|
|
* cdef np.ndarray[np.float64_t, ndim=1, mode='c'] probA
|
|
*/
|
|
copy_nSV(__pyx_v_n_class_SV->data, __pyx_v_model);
|
|
|
|
/* "sklearn/svm/libsvm.pyx":228
|
|
* cdef np.ndarray[np.float64_t, ndim=1, mode='c'] probA
|
|
* cdef np.ndarray[np.float64_t, ndim=1, mode='c'] probB
|
|
* if probability != 0: # <<<<<<<<<<<<<<
|
|
* if svm_type < 2: # SVC and NuSVC
|
|
* probA = np.empty(int(n_class*(n_class-1)/2), dtype=np.float64)
|
|
*/
|
|
__pyx_t_2 = ((__pyx_v_probability != 0) != 0);
|
|
if (__pyx_t_2) {
|
|
|
|
/* "sklearn/svm/libsvm.pyx":229
|
|
* cdef np.ndarray[np.float64_t, ndim=1, mode='c'] probB
|
|
* if probability != 0:
|
|
* if svm_type < 2: # SVC and NuSVC # <<<<<<<<<<<<<<
|
|
* probA = np.empty(int(n_class*(n_class-1)/2), dtype=np.float64)
|
|
* probB = np.empty(int(n_class*(n_class-1)/2), dtype=np.float64)
|
|
*/
|
|
__pyx_t_2 = ((__pyx_v_svm_type < 2) != 0);
|
|
if (__pyx_t_2) {
|
|
|
|
/* "sklearn/svm/libsvm.pyx":230
|
|
* if probability != 0:
|
|
* if svm_type < 2: # SVC and NuSVC
|
|
* probA = np.empty(int(n_class*(n_class-1)/2), dtype=np.float64) # <<<<<<<<<<<<<<
|
|
* probB = np.empty(int(n_class*(n_class-1)/2), dtype=np.float64)
|
|
* copy_probB(probB.data, model, probB.shape)
|
|
*/
|
|
__pyx_t_3 = __Pyx_GetModuleGlobalName(__pyx_n_s_np); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 230; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_3);
|
|
__pyx_t_6 = __Pyx_PyObject_GetAttrStr(__pyx_t_3, __pyx_n_s_empty); if (unlikely(!__pyx_t_6)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 230; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_6);
|
|
__Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0;
|
|
__pyx_t_3 = PyNumber_Subtract(__pyx_v_n_class, __pyx_int_1); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 230; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_3);
|
|
__pyx_t_5 = PyNumber_Multiply(__pyx_v_n_class, __pyx_t_3); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 230; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_5);
|
|
__Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0;
|
|
__pyx_t_3 = __Pyx_PyNumber_Divide(__pyx_t_5, __pyx_int_2); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 230; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_3);
|
|
__Pyx_DECREF(__pyx_t_5); __pyx_t_5 = 0;
|
|
__pyx_t_5 = PyNumber_Int(__pyx_t_3); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 230; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_5);
|
|
__Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0;
|
|
__pyx_t_3 = PyTuple_New(1); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 230; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_3);
|
|
PyTuple_SET_ITEM(__pyx_t_3, 0, __pyx_t_5);
|
|
__Pyx_GIVEREF(__pyx_t_5);
|
|
__pyx_t_5 = 0;
|
|
__pyx_t_5 = PyDict_New(); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 230; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_5);
|
|
__pyx_t_4 = __Pyx_GetModuleGlobalName(__pyx_n_s_np); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 230; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_4);
|
|
__pyx_t_7 = __Pyx_PyObject_GetAttrStr(__pyx_t_4, __pyx_n_s_float64); if (unlikely(!__pyx_t_7)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 230; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_7);
|
|
__Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0;
|
|
if (PyDict_SetItem(__pyx_t_5, __pyx_n_s_dtype, __pyx_t_7) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 230; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_DECREF(__pyx_t_7); __pyx_t_7 = 0;
|
|
__pyx_t_7 = __Pyx_PyObject_Call(__pyx_t_6, __pyx_t_3, __pyx_t_5); if (unlikely(!__pyx_t_7)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 230; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_7);
|
|
__Pyx_DECREF(__pyx_t_6); __pyx_t_6 = 0;
|
|
__Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0;
|
|
__Pyx_DECREF(__pyx_t_5); __pyx_t_5 = 0;
|
|
if (!(likely(((__pyx_t_7) == Py_None) || likely(__Pyx_TypeTest(__pyx_t_7, __pyx_ptype_5numpy_ndarray))))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 230; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__pyx_t_19 = ((PyArrayObject *)__pyx_t_7);
|
|
{
|
|
__Pyx_BufFmt_StackElem __pyx_stack[1];
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_probA.rcbuffer->pybuffer);
|
|
__pyx_t_9 = __Pyx_GetBufferAndValidate(&__pyx_pybuffernd_probA.rcbuffer->pybuffer, (PyObject*)__pyx_t_19, &__Pyx_TypeInfo_nn___pyx_t_5numpy_float64_t, PyBUF_FORMAT| PyBUF_C_CONTIGUOUS, 1, 0, __pyx_stack);
|
|
if (unlikely(__pyx_t_9 < 0)) {
|
|
PyErr_Fetch(&__pyx_t_12, &__pyx_t_11, &__pyx_t_10);
|
|
if (unlikely(__Pyx_GetBufferAndValidate(&__pyx_pybuffernd_probA.rcbuffer->pybuffer, (PyObject*)__pyx_v_probA, &__Pyx_TypeInfo_nn___pyx_t_5numpy_float64_t, PyBUF_FORMAT| PyBUF_C_CONTIGUOUS, 1, 0, __pyx_stack) == -1)) {
|
|
Py_XDECREF(__pyx_t_12); Py_XDECREF(__pyx_t_11); Py_XDECREF(__pyx_t_10);
|
|
__Pyx_RaiseBufferFallbackError();
|
|
} else {
|
|
PyErr_Restore(__pyx_t_12, __pyx_t_11, __pyx_t_10);
|
|
}
|
|
}
|
|
__pyx_pybuffernd_probA.diminfo[0].strides = __pyx_pybuffernd_probA.rcbuffer->pybuffer.strides[0]; __pyx_pybuffernd_probA.diminfo[0].shape = __pyx_pybuffernd_probA.rcbuffer->pybuffer.shape[0];
|
|
if (unlikely(__pyx_t_9 < 0)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 230; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
}
|
|
__pyx_t_19 = 0;
|
|
__pyx_v_probA = ((PyArrayObject *)__pyx_t_7);
|
|
__pyx_t_7 = 0;
|
|
|
|
/* "sklearn/svm/libsvm.pyx":231
|
|
* if svm_type < 2: # SVC and NuSVC
|
|
* probA = np.empty(int(n_class*(n_class-1)/2), dtype=np.float64)
|
|
* probB = np.empty(int(n_class*(n_class-1)/2), dtype=np.float64) # <<<<<<<<<<<<<<
|
|
* copy_probB(probB.data, model, probB.shape)
|
|
* else:
|
|
*/
|
|
__pyx_t_7 = __Pyx_GetModuleGlobalName(__pyx_n_s_np); if (unlikely(!__pyx_t_7)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 231; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_7);
|
|
__pyx_t_5 = __Pyx_PyObject_GetAttrStr(__pyx_t_7, __pyx_n_s_empty); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 231; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_5);
|
|
__Pyx_DECREF(__pyx_t_7); __pyx_t_7 = 0;
|
|
__pyx_t_7 = PyNumber_Subtract(__pyx_v_n_class, __pyx_int_1); if (unlikely(!__pyx_t_7)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 231; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_7);
|
|
__pyx_t_3 = PyNumber_Multiply(__pyx_v_n_class, __pyx_t_7); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 231; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_3);
|
|
__Pyx_DECREF(__pyx_t_7); __pyx_t_7 = 0;
|
|
__pyx_t_7 = __Pyx_PyNumber_Divide(__pyx_t_3, __pyx_int_2); if (unlikely(!__pyx_t_7)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 231; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_7);
|
|
__Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0;
|
|
__pyx_t_3 = PyNumber_Int(__pyx_t_7); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 231; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_3);
|
|
__Pyx_DECREF(__pyx_t_7); __pyx_t_7 = 0;
|
|
__pyx_t_7 = PyTuple_New(1); if (unlikely(!__pyx_t_7)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 231; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_7);
|
|
PyTuple_SET_ITEM(__pyx_t_7, 0, __pyx_t_3);
|
|
__Pyx_GIVEREF(__pyx_t_3);
|
|
__pyx_t_3 = 0;
|
|
__pyx_t_3 = PyDict_New(); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 231; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_3);
|
|
__pyx_t_6 = __Pyx_GetModuleGlobalName(__pyx_n_s_np); if (unlikely(!__pyx_t_6)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 231; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_6);
|
|
__pyx_t_4 = __Pyx_PyObject_GetAttrStr(__pyx_t_6, __pyx_n_s_float64); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 231; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_4);
|
|
__Pyx_DECREF(__pyx_t_6); __pyx_t_6 = 0;
|
|
if (PyDict_SetItem(__pyx_t_3, __pyx_n_s_dtype, __pyx_t_4) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 231; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0;
|
|
__pyx_t_4 = __Pyx_PyObject_Call(__pyx_t_5, __pyx_t_7, __pyx_t_3); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 231; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_4);
|
|
__Pyx_DECREF(__pyx_t_5); __pyx_t_5 = 0;
|
|
__Pyx_DECREF(__pyx_t_7); __pyx_t_7 = 0;
|
|
__Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0;
|
|
if (!(likely(((__pyx_t_4) == Py_None) || likely(__Pyx_TypeTest(__pyx_t_4, __pyx_ptype_5numpy_ndarray))))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 231; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__pyx_t_20 = ((PyArrayObject *)__pyx_t_4);
|
|
{
|
|
__Pyx_BufFmt_StackElem __pyx_stack[1];
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_probB.rcbuffer->pybuffer);
|
|
__pyx_t_9 = __Pyx_GetBufferAndValidate(&__pyx_pybuffernd_probB.rcbuffer->pybuffer, (PyObject*)__pyx_t_20, &__Pyx_TypeInfo_nn___pyx_t_5numpy_float64_t, PyBUF_FORMAT| PyBUF_C_CONTIGUOUS, 1, 0, __pyx_stack);
|
|
if (unlikely(__pyx_t_9 < 0)) {
|
|
PyErr_Fetch(&__pyx_t_10, &__pyx_t_11, &__pyx_t_12);
|
|
if (unlikely(__Pyx_GetBufferAndValidate(&__pyx_pybuffernd_probB.rcbuffer->pybuffer, (PyObject*)__pyx_v_probB, &__Pyx_TypeInfo_nn___pyx_t_5numpy_float64_t, PyBUF_FORMAT| PyBUF_C_CONTIGUOUS, 1, 0, __pyx_stack) == -1)) {
|
|
Py_XDECREF(__pyx_t_10); Py_XDECREF(__pyx_t_11); Py_XDECREF(__pyx_t_12);
|
|
__Pyx_RaiseBufferFallbackError();
|
|
} else {
|
|
PyErr_Restore(__pyx_t_10, __pyx_t_11, __pyx_t_12);
|
|
}
|
|
}
|
|
__pyx_pybuffernd_probB.diminfo[0].strides = __pyx_pybuffernd_probB.rcbuffer->pybuffer.strides[0]; __pyx_pybuffernd_probB.diminfo[0].shape = __pyx_pybuffernd_probB.rcbuffer->pybuffer.shape[0];
|
|
if (unlikely(__pyx_t_9 < 0)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 231; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
}
|
|
__pyx_t_20 = 0;
|
|
__pyx_v_probB = ((PyArrayObject *)__pyx_t_4);
|
|
__pyx_t_4 = 0;
|
|
|
|
/* "sklearn/svm/libsvm.pyx":232
|
|
* probA = np.empty(int(n_class*(n_class-1)/2), dtype=np.float64)
|
|
* probB = np.empty(int(n_class*(n_class-1)/2), dtype=np.float64)
|
|
* copy_probB(probB.data, model, probB.shape) # <<<<<<<<<<<<<<
|
|
* else:
|
|
* probA = np.empty(1, dtype=np.float64)
|
|
*/
|
|
copy_probB(__pyx_v_probB->data, __pyx_v_model, __pyx_v_probB->dimensions);
|
|
goto __pyx_L11;
|
|
}
|
|
/*else*/ {
|
|
|
|
/* "sklearn/svm/libsvm.pyx":234
|
|
* copy_probB(probB.data, model, probB.shape)
|
|
* else:
|
|
* probA = np.empty(1, dtype=np.float64) # <<<<<<<<<<<<<<
|
|
* probB = np.empty(0, dtype=np.float64)
|
|
* copy_probA(probA.data, model, probA.shape)
|
|
*/
|
|
__pyx_t_4 = __Pyx_GetModuleGlobalName(__pyx_n_s_np); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 234; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_4);
|
|
__pyx_t_3 = __Pyx_PyObject_GetAttrStr(__pyx_t_4, __pyx_n_s_empty); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 234; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_3);
|
|
__Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0;
|
|
__pyx_t_4 = PyDict_New(); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 234; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_4);
|
|
__pyx_t_7 = __Pyx_GetModuleGlobalName(__pyx_n_s_np); if (unlikely(!__pyx_t_7)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 234; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_7);
|
|
__pyx_t_5 = __Pyx_PyObject_GetAttrStr(__pyx_t_7, __pyx_n_s_float64); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 234; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_5);
|
|
__Pyx_DECREF(__pyx_t_7); __pyx_t_7 = 0;
|
|
if (PyDict_SetItem(__pyx_t_4, __pyx_n_s_dtype, __pyx_t_5) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 234; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_DECREF(__pyx_t_5); __pyx_t_5 = 0;
|
|
__pyx_t_5 = __Pyx_PyObject_Call(__pyx_t_3, __pyx_tuple__6, __pyx_t_4); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 234; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_5);
|
|
__Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0;
|
|
__Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0;
|
|
if (!(likely(((__pyx_t_5) == Py_None) || likely(__Pyx_TypeTest(__pyx_t_5, __pyx_ptype_5numpy_ndarray))))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 234; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__pyx_t_19 = ((PyArrayObject *)__pyx_t_5);
|
|
{
|
|
__Pyx_BufFmt_StackElem __pyx_stack[1];
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_probA.rcbuffer->pybuffer);
|
|
__pyx_t_9 = __Pyx_GetBufferAndValidate(&__pyx_pybuffernd_probA.rcbuffer->pybuffer, (PyObject*)__pyx_t_19, &__Pyx_TypeInfo_nn___pyx_t_5numpy_float64_t, PyBUF_FORMAT| PyBUF_C_CONTIGUOUS, 1, 0, __pyx_stack);
|
|
if (unlikely(__pyx_t_9 < 0)) {
|
|
PyErr_Fetch(&__pyx_t_12, &__pyx_t_11, &__pyx_t_10);
|
|
if (unlikely(__Pyx_GetBufferAndValidate(&__pyx_pybuffernd_probA.rcbuffer->pybuffer, (PyObject*)__pyx_v_probA, &__Pyx_TypeInfo_nn___pyx_t_5numpy_float64_t, PyBUF_FORMAT| PyBUF_C_CONTIGUOUS, 1, 0, __pyx_stack) == -1)) {
|
|
Py_XDECREF(__pyx_t_12); Py_XDECREF(__pyx_t_11); Py_XDECREF(__pyx_t_10);
|
|
__Pyx_RaiseBufferFallbackError();
|
|
} else {
|
|
PyErr_Restore(__pyx_t_12, __pyx_t_11, __pyx_t_10);
|
|
}
|
|
}
|
|
__pyx_pybuffernd_probA.diminfo[0].strides = __pyx_pybuffernd_probA.rcbuffer->pybuffer.strides[0]; __pyx_pybuffernd_probA.diminfo[0].shape = __pyx_pybuffernd_probA.rcbuffer->pybuffer.shape[0];
|
|
if (unlikely(__pyx_t_9 < 0)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 234; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
}
|
|
__pyx_t_19 = 0;
|
|
__pyx_v_probA = ((PyArrayObject *)__pyx_t_5);
|
|
__pyx_t_5 = 0;
|
|
|
|
/* "sklearn/svm/libsvm.pyx":235
|
|
* else:
|
|
* probA = np.empty(1, dtype=np.float64)
|
|
* probB = np.empty(0, dtype=np.float64) # <<<<<<<<<<<<<<
|
|
* copy_probA(probA.data, model, probA.shape)
|
|
* else:
|
|
*/
|
|
__pyx_t_5 = __Pyx_GetModuleGlobalName(__pyx_n_s_np); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 235; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_5);
|
|
__pyx_t_4 = __Pyx_PyObject_GetAttrStr(__pyx_t_5, __pyx_n_s_empty); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 235; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_4);
|
|
__Pyx_DECREF(__pyx_t_5); __pyx_t_5 = 0;
|
|
__pyx_t_5 = PyDict_New(); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 235; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_5);
|
|
__pyx_t_3 = __Pyx_GetModuleGlobalName(__pyx_n_s_np); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 235; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_3);
|
|
__pyx_t_7 = __Pyx_PyObject_GetAttrStr(__pyx_t_3, __pyx_n_s_float64); if (unlikely(!__pyx_t_7)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 235; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_7);
|
|
__Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0;
|
|
if (PyDict_SetItem(__pyx_t_5, __pyx_n_s_dtype, __pyx_t_7) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 235; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_DECREF(__pyx_t_7); __pyx_t_7 = 0;
|
|
__pyx_t_7 = __Pyx_PyObject_Call(__pyx_t_4, __pyx_tuple__7, __pyx_t_5); if (unlikely(!__pyx_t_7)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 235; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_7);
|
|
__Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0;
|
|
__Pyx_DECREF(__pyx_t_5); __pyx_t_5 = 0;
|
|
if (!(likely(((__pyx_t_7) == Py_None) || likely(__Pyx_TypeTest(__pyx_t_7, __pyx_ptype_5numpy_ndarray))))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 235; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__pyx_t_20 = ((PyArrayObject *)__pyx_t_7);
|
|
{
|
|
__Pyx_BufFmt_StackElem __pyx_stack[1];
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_probB.rcbuffer->pybuffer);
|
|
__pyx_t_9 = __Pyx_GetBufferAndValidate(&__pyx_pybuffernd_probB.rcbuffer->pybuffer, (PyObject*)__pyx_t_20, &__Pyx_TypeInfo_nn___pyx_t_5numpy_float64_t, PyBUF_FORMAT| PyBUF_C_CONTIGUOUS, 1, 0, __pyx_stack);
|
|
if (unlikely(__pyx_t_9 < 0)) {
|
|
PyErr_Fetch(&__pyx_t_10, &__pyx_t_11, &__pyx_t_12);
|
|
if (unlikely(__Pyx_GetBufferAndValidate(&__pyx_pybuffernd_probB.rcbuffer->pybuffer, (PyObject*)__pyx_v_probB, &__Pyx_TypeInfo_nn___pyx_t_5numpy_float64_t, PyBUF_FORMAT| PyBUF_C_CONTIGUOUS, 1, 0, __pyx_stack) == -1)) {
|
|
Py_XDECREF(__pyx_t_10); Py_XDECREF(__pyx_t_11); Py_XDECREF(__pyx_t_12);
|
|
__Pyx_RaiseBufferFallbackError();
|
|
} else {
|
|
PyErr_Restore(__pyx_t_10, __pyx_t_11, __pyx_t_12);
|
|
}
|
|
}
|
|
__pyx_pybuffernd_probB.diminfo[0].strides = __pyx_pybuffernd_probB.rcbuffer->pybuffer.strides[0]; __pyx_pybuffernd_probB.diminfo[0].shape = __pyx_pybuffernd_probB.rcbuffer->pybuffer.shape[0];
|
|
if (unlikely(__pyx_t_9 < 0)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 235; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
}
|
|
__pyx_t_20 = 0;
|
|
__pyx_v_probB = ((PyArrayObject *)__pyx_t_7);
|
|
__pyx_t_7 = 0;
|
|
}
|
|
__pyx_L11:;
|
|
|
|
/* "sklearn/svm/libsvm.pyx":236
|
|
* probA = np.empty(1, dtype=np.float64)
|
|
* probB = np.empty(0, dtype=np.float64)
|
|
* copy_probA(probA.data, model, probA.shape) # <<<<<<<<<<<<<<
|
|
* else:
|
|
* probA = np.empty(0, dtype=np.float64)
|
|
*/
|
|
copy_probA(__pyx_v_probA->data, __pyx_v_model, __pyx_v_probA->dimensions);
|
|
goto __pyx_L10;
|
|
}
|
|
/*else*/ {
|
|
|
|
/* "sklearn/svm/libsvm.pyx":238
|
|
* copy_probA(probA.data, model, probA.shape)
|
|
* else:
|
|
* probA = np.empty(0, dtype=np.float64) # <<<<<<<<<<<<<<
|
|
* probB = np.empty(0, dtype=np.float64)
|
|
*
|
|
*/
|
|
__pyx_t_7 = __Pyx_GetModuleGlobalName(__pyx_n_s_np); if (unlikely(!__pyx_t_7)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 238; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_7);
|
|
__pyx_t_5 = __Pyx_PyObject_GetAttrStr(__pyx_t_7, __pyx_n_s_empty); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 238; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_5);
|
|
__Pyx_DECREF(__pyx_t_7); __pyx_t_7 = 0;
|
|
__pyx_t_7 = PyDict_New(); if (unlikely(!__pyx_t_7)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 238; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_7);
|
|
__pyx_t_4 = __Pyx_GetModuleGlobalName(__pyx_n_s_np); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 238; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_4);
|
|
__pyx_t_3 = __Pyx_PyObject_GetAttrStr(__pyx_t_4, __pyx_n_s_float64); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 238; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_3);
|
|
__Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0;
|
|
if (PyDict_SetItem(__pyx_t_7, __pyx_n_s_dtype, __pyx_t_3) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 238; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0;
|
|
__pyx_t_3 = __Pyx_PyObject_Call(__pyx_t_5, __pyx_tuple__8, __pyx_t_7); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 238; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_3);
|
|
__Pyx_DECREF(__pyx_t_5); __pyx_t_5 = 0;
|
|
__Pyx_DECREF(__pyx_t_7); __pyx_t_7 = 0;
|
|
if (!(likely(((__pyx_t_3) == Py_None) || likely(__Pyx_TypeTest(__pyx_t_3, __pyx_ptype_5numpy_ndarray))))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 238; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__pyx_t_19 = ((PyArrayObject *)__pyx_t_3);
|
|
{
|
|
__Pyx_BufFmt_StackElem __pyx_stack[1];
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_probA.rcbuffer->pybuffer);
|
|
__pyx_t_9 = __Pyx_GetBufferAndValidate(&__pyx_pybuffernd_probA.rcbuffer->pybuffer, (PyObject*)__pyx_t_19, &__Pyx_TypeInfo_nn___pyx_t_5numpy_float64_t, PyBUF_FORMAT| PyBUF_C_CONTIGUOUS, 1, 0, __pyx_stack);
|
|
if (unlikely(__pyx_t_9 < 0)) {
|
|
PyErr_Fetch(&__pyx_t_12, &__pyx_t_11, &__pyx_t_10);
|
|
if (unlikely(__Pyx_GetBufferAndValidate(&__pyx_pybuffernd_probA.rcbuffer->pybuffer, (PyObject*)__pyx_v_probA, &__Pyx_TypeInfo_nn___pyx_t_5numpy_float64_t, PyBUF_FORMAT| PyBUF_C_CONTIGUOUS, 1, 0, __pyx_stack) == -1)) {
|
|
Py_XDECREF(__pyx_t_12); Py_XDECREF(__pyx_t_11); Py_XDECREF(__pyx_t_10);
|
|
__Pyx_RaiseBufferFallbackError();
|
|
} else {
|
|
PyErr_Restore(__pyx_t_12, __pyx_t_11, __pyx_t_10);
|
|
}
|
|
}
|
|
__pyx_pybuffernd_probA.diminfo[0].strides = __pyx_pybuffernd_probA.rcbuffer->pybuffer.strides[0]; __pyx_pybuffernd_probA.diminfo[0].shape = __pyx_pybuffernd_probA.rcbuffer->pybuffer.shape[0];
|
|
if (unlikely(__pyx_t_9 < 0)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 238; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
}
|
|
__pyx_t_19 = 0;
|
|
__pyx_v_probA = ((PyArrayObject *)__pyx_t_3);
|
|
__pyx_t_3 = 0;
|
|
|
|
/* "sklearn/svm/libsvm.pyx":239
|
|
* else:
|
|
* probA = np.empty(0, dtype=np.float64)
|
|
* probB = np.empty(0, dtype=np.float64) # <<<<<<<<<<<<<<
|
|
*
|
|
* svm_free_and_destroy_model(&model)
|
|
*/
|
|
__pyx_t_3 = __Pyx_GetModuleGlobalName(__pyx_n_s_np); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 239; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_3);
|
|
__pyx_t_7 = __Pyx_PyObject_GetAttrStr(__pyx_t_3, __pyx_n_s_empty); if (unlikely(!__pyx_t_7)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 239; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_7);
|
|
__Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0;
|
|
__pyx_t_3 = PyDict_New(); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 239; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_3);
|
|
__pyx_t_5 = __Pyx_GetModuleGlobalName(__pyx_n_s_np); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 239; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_5);
|
|
__pyx_t_4 = __Pyx_PyObject_GetAttrStr(__pyx_t_5, __pyx_n_s_float64); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 239; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_4);
|
|
__Pyx_DECREF(__pyx_t_5); __pyx_t_5 = 0;
|
|
if (PyDict_SetItem(__pyx_t_3, __pyx_n_s_dtype, __pyx_t_4) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 239; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0;
|
|
__pyx_t_4 = __Pyx_PyObject_Call(__pyx_t_7, __pyx_tuple__9, __pyx_t_3); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 239; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_4);
|
|
__Pyx_DECREF(__pyx_t_7); __pyx_t_7 = 0;
|
|
__Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0;
|
|
if (!(likely(((__pyx_t_4) == Py_None) || likely(__Pyx_TypeTest(__pyx_t_4, __pyx_ptype_5numpy_ndarray))))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 239; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__pyx_t_20 = ((PyArrayObject *)__pyx_t_4);
|
|
{
|
|
__Pyx_BufFmt_StackElem __pyx_stack[1];
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_probB.rcbuffer->pybuffer);
|
|
__pyx_t_9 = __Pyx_GetBufferAndValidate(&__pyx_pybuffernd_probB.rcbuffer->pybuffer, (PyObject*)__pyx_t_20, &__Pyx_TypeInfo_nn___pyx_t_5numpy_float64_t, PyBUF_FORMAT| PyBUF_C_CONTIGUOUS, 1, 0, __pyx_stack);
|
|
if (unlikely(__pyx_t_9 < 0)) {
|
|
PyErr_Fetch(&__pyx_t_10, &__pyx_t_11, &__pyx_t_12);
|
|
if (unlikely(__Pyx_GetBufferAndValidate(&__pyx_pybuffernd_probB.rcbuffer->pybuffer, (PyObject*)__pyx_v_probB, &__Pyx_TypeInfo_nn___pyx_t_5numpy_float64_t, PyBUF_FORMAT| PyBUF_C_CONTIGUOUS, 1, 0, __pyx_stack) == -1)) {
|
|
Py_XDECREF(__pyx_t_10); Py_XDECREF(__pyx_t_11); Py_XDECREF(__pyx_t_12);
|
|
__Pyx_RaiseBufferFallbackError();
|
|
} else {
|
|
PyErr_Restore(__pyx_t_10, __pyx_t_11, __pyx_t_12);
|
|
}
|
|
}
|
|
__pyx_pybuffernd_probB.diminfo[0].strides = __pyx_pybuffernd_probB.rcbuffer->pybuffer.strides[0]; __pyx_pybuffernd_probB.diminfo[0].shape = __pyx_pybuffernd_probB.rcbuffer->pybuffer.shape[0];
|
|
if (unlikely(__pyx_t_9 < 0)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 239; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
}
|
|
__pyx_t_20 = 0;
|
|
__pyx_v_probB = ((PyArrayObject *)__pyx_t_4);
|
|
__pyx_t_4 = 0;
|
|
}
|
|
__pyx_L10:;
|
|
|
|
/* "sklearn/svm/libsvm.pyx":241
|
|
* probB = np.empty(0, dtype=np.float64)
|
|
*
|
|
* svm_free_and_destroy_model(&model) # <<<<<<<<<<<<<<
|
|
* free(problem.x)
|
|
*
|
|
*/
|
|
svm_free_and_destroy_model((&__pyx_v_model));
|
|
|
|
/* "sklearn/svm/libsvm.pyx":242
|
|
*
|
|
* svm_free_and_destroy_model(&model)
|
|
* free(problem.x) # <<<<<<<<<<<<<<
|
|
*
|
|
* return (support, support_vectors, n_class_SV, sv_coef, intercept,
|
|
*/
|
|
free(__pyx_v_problem.x);
|
|
|
|
/* "sklearn/svm/libsvm.pyx":244
|
|
* free(problem.x)
|
|
*
|
|
* return (support, support_vectors, n_class_SV, sv_coef, intercept, # <<<<<<<<<<<<<<
|
|
* probA, probB, fit_status)
|
|
*
|
|
*/
|
|
__Pyx_XDECREF(__pyx_r);
|
|
|
|
/* "sklearn/svm/libsvm.pyx":245
|
|
*
|
|
* return (support, support_vectors, n_class_SV, sv_coef, intercept,
|
|
* probA, probB, fit_status) # <<<<<<<<<<<<<<
|
|
*
|
|
*
|
|
*/
|
|
__pyx_t_4 = __Pyx_PyInt_From_int(__pyx_v_fit_status); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 245; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_4);
|
|
|
|
/* "sklearn/svm/libsvm.pyx":244
|
|
* free(problem.x)
|
|
*
|
|
* return (support, support_vectors, n_class_SV, sv_coef, intercept, # <<<<<<<<<<<<<<
|
|
* probA, probB, fit_status)
|
|
*
|
|
*/
|
|
__pyx_t_3 = PyTuple_New(8); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 244; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_3);
|
|
__Pyx_INCREF(((PyObject *)__pyx_v_support));
|
|
PyTuple_SET_ITEM(__pyx_t_3, 0, ((PyObject *)__pyx_v_support));
|
|
__Pyx_GIVEREF(((PyObject *)__pyx_v_support));
|
|
__Pyx_INCREF(((PyObject *)__pyx_v_support_vectors));
|
|
PyTuple_SET_ITEM(__pyx_t_3, 1, ((PyObject *)__pyx_v_support_vectors));
|
|
__Pyx_GIVEREF(((PyObject *)__pyx_v_support_vectors));
|
|
__Pyx_INCREF(((PyObject *)__pyx_v_n_class_SV));
|
|
PyTuple_SET_ITEM(__pyx_t_3, 2, ((PyObject *)__pyx_v_n_class_SV));
|
|
__Pyx_GIVEREF(((PyObject *)__pyx_v_n_class_SV));
|
|
__Pyx_INCREF(((PyObject *)__pyx_v_sv_coef));
|
|
PyTuple_SET_ITEM(__pyx_t_3, 3, ((PyObject *)__pyx_v_sv_coef));
|
|
__Pyx_GIVEREF(((PyObject *)__pyx_v_sv_coef));
|
|
__Pyx_INCREF(((PyObject *)__pyx_v_intercept));
|
|
PyTuple_SET_ITEM(__pyx_t_3, 4, ((PyObject *)__pyx_v_intercept));
|
|
__Pyx_GIVEREF(((PyObject *)__pyx_v_intercept));
|
|
__Pyx_INCREF(((PyObject *)__pyx_v_probA));
|
|
PyTuple_SET_ITEM(__pyx_t_3, 5, ((PyObject *)__pyx_v_probA));
|
|
__Pyx_GIVEREF(((PyObject *)__pyx_v_probA));
|
|
__Pyx_INCREF(((PyObject *)__pyx_v_probB));
|
|
PyTuple_SET_ITEM(__pyx_t_3, 6, ((PyObject *)__pyx_v_probB));
|
|
__Pyx_GIVEREF(((PyObject *)__pyx_v_probB));
|
|
PyTuple_SET_ITEM(__pyx_t_3, 7, __pyx_t_4);
|
|
__Pyx_GIVEREF(__pyx_t_4);
|
|
__pyx_t_4 = 0;
|
|
__pyx_r = __pyx_t_3;
|
|
__pyx_t_3 = 0;
|
|
goto __pyx_L0;
|
|
|
|
/* "sklearn/svm/libsvm.pyx":54
|
|
* # Wrapper functions
|
|
*
|
|
* def fit( # <<<<<<<<<<<<<<
|
|
* np.ndarray[np.float64_t, ndim=2, mode='c'] X,
|
|
* np.ndarray[np.float64_t, ndim=1, mode='c'] Y,
|
|
*/
|
|
|
|
/* function exit code */
|
|
__pyx_L1_error:;
|
|
__Pyx_XDECREF(__pyx_t_3);
|
|
__Pyx_XDECREF(__pyx_t_4);
|
|
__Pyx_XDECREF(__pyx_t_5);
|
|
__Pyx_XDECREF(__pyx_t_6);
|
|
__Pyx_XDECREF(__pyx_t_7);
|
|
{ PyObject *__pyx_type, *__pyx_value, *__pyx_tb;
|
|
__Pyx_ErrFetch(&__pyx_type, &__pyx_value, &__pyx_tb);
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_X.rcbuffer->pybuffer);
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_Y.rcbuffer->pybuffer);
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_class_weight.rcbuffer->pybuffer);
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_class_weight_label.rcbuffer->pybuffer);
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_intercept.rcbuffer->pybuffer);
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_n_class_SV.rcbuffer->pybuffer);
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_probA.rcbuffer->pybuffer);
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_probB.rcbuffer->pybuffer);
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_sample_weight.rcbuffer->pybuffer);
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_support.rcbuffer->pybuffer);
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_support_vectors.rcbuffer->pybuffer);
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_sv_coef.rcbuffer->pybuffer);
|
|
__Pyx_ErrRestore(__pyx_type, __pyx_value, __pyx_tb);}
|
|
__Pyx_AddTraceback("sklearn.svm.libsvm.fit", __pyx_clineno, __pyx_lineno, __pyx_filename);
|
|
__pyx_r = NULL;
|
|
goto __pyx_L2;
|
|
__pyx_L0:;
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_X.rcbuffer->pybuffer);
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_Y.rcbuffer->pybuffer);
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_class_weight.rcbuffer->pybuffer);
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_class_weight_label.rcbuffer->pybuffer);
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_intercept.rcbuffer->pybuffer);
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_n_class_SV.rcbuffer->pybuffer);
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_probA.rcbuffer->pybuffer);
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_probB.rcbuffer->pybuffer);
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_sample_weight.rcbuffer->pybuffer);
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_support.rcbuffer->pybuffer);
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_support_vectors.rcbuffer->pybuffer);
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_sv_coef.rcbuffer->pybuffer);
|
|
__pyx_L2:;
|
|
__Pyx_XDECREF(__pyx_v_kernel_index);
|
|
__Pyx_XDECREF((PyObject *)__pyx_v_class_weight_label);
|
|
__Pyx_XDECREF(__pyx_v_error_repl);
|
|
__Pyx_XDECREF(__pyx_v_n_class);
|
|
__Pyx_XDECREF((PyObject *)__pyx_v_sv_coef);
|
|
__Pyx_XDECREF((PyObject *)__pyx_v_intercept);
|
|
__Pyx_XDECREF((PyObject *)__pyx_v_support);
|
|
__Pyx_XDECREF((PyObject *)__pyx_v_support_vectors);
|
|
__Pyx_XDECREF((PyObject *)__pyx_v_n_class_SV);
|
|
__Pyx_XDECREF((PyObject *)__pyx_v_probA);
|
|
__Pyx_XDECREF((PyObject *)__pyx_v_probB);
|
|
__Pyx_XDECREF((PyObject *)__pyx_v_sample_weight);
|
|
__Pyx_XGIVEREF(__pyx_r);
|
|
__Pyx_RefNannyFinishContext();
|
|
return __pyx_r;
|
|
}
|
|
|
|
/* "sklearn/svm/libsvm.pyx":248
|
|
*
|
|
*
|
|
* cdef void set_predict_params( # <<<<<<<<<<<<<<
|
|
* svm_parameter *param, int svm_type, kernel, int degree, double gamma,
|
|
* double coef0, double cache_size, int probability, int nr_weight,
|
|
*/
|
|
|
|
static void __pyx_f_7sklearn_3svm_6libsvm_set_predict_params(struct svm_parameter *__pyx_v_param, int __pyx_v_svm_type, PyObject *__pyx_v_kernel, int __pyx_v_degree, double __pyx_v_gamma, double __pyx_v_coef0, double __pyx_v_cache_size, int __pyx_v_probability, int __pyx_v_nr_weight, char *__pyx_v_weight_label, char *__pyx_v_weight) {
|
|
double __pyx_v_C;
|
|
double __pyx_v_epsilon;
|
|
int __pyx_v_max_iter;
|
|
double __pyx_v_nu;
|
|
int __pyx_v_shrinking;
|
|
double __pyx_v_tol;
|
|
int __pyx_v_random_seed;
|
|
PyObject *__pyx_v_kernel_index = NULL;
|
|
__Pyx_RefNannyDeclarations
|
|
PyObject *__pyx_t_1 = NULL;
|
|
PyObject *__pyx_t_2 = NULL;
|
|
PyObject *__pyx_t_3 = NULL;
|
|
int __pyx_t_4;
|
|
int __pyx_lineno = 0;
|
|
const char *__pyx_filename = NULL;
|
|
int __pyx_clineno = 0;
|
|
__Pyx_RefNannySetupContext("set_predict_params", 0);
|
|
|
|
/* "sklearn/svm/libsvm.pyx":255
|
|
*
|
|
* # training-time only parameters
|
|
* cdef double C = .0 # <<<<<<<<<<<<<<
|
|
* cdef double epsilon = .1
|
|
* cdef int max_iter = 0
|
|
*/
|
|
__pyx_v_C = .0;
|
|
|
|
/* "sklearn/svm/libsvm.pyx":256
|
|
* # training-time only parameters
|
|
* cdef double C = .0
|
|
* cdef double epsilon = .1 # <<<<<<<<<<<<<<
|
|
* cdef int max_iter = 0
|
|
* cdef double nu = .5
|
|
*/
|
|
__pyx_v_epsilon = .1;
|
|
|
|
/* "sklearn/svm/libsvm.pyx":257
|
|
* cdef double C = .0
|
|
* cdef double epsilon = .1
|
|
* cdef int max_iter = 0 # <<<<<<<<<<<<<<
|
|
* cdef double nu = .5
|
|
* cdef int shrinking = 0
|
|
*/
|
|
__pyx_v_max_iter = 0;
|
|
|
|
/* "sklearn/svm/libsvm.pyx":258
|
|
* cdef double epsilon = .1
|
|
* cdef int max_iter = 0
|
|
* cdef double nu = .5 # <<<<<<<<<<<<<<
|
|
* cdef int shrinking = 0
|
|
* cdef double tol = .1
|
|
*/
|
|
__pyx_v_nu = .5;
|
|
|
|
/* "sklearn/svm/libsvm.pyx":259
|
|
* cdef int max_iter = 0
|
|
* cdef double nu = .5
|
|
* cdef int shrinking = 0 # <<<<<<<<<<<<<<
|
|
* cdef double tol = .1
|
|
* cdef int random_seed = -1
|
|
*/
|
|
__pyx_v_shrinking = 0;
|
|
|
|
/* "sklearn/svm/libsvm.pyx":260
|
|
* cdef double nu = .5
|
|
* cdef int shrinking = 0
|
|
* cdef double tol = .1 # <<<<<<<<<<<<<<
|
|
* cdef int random_seed = -1
|
|
*
|
|
*/
|
|
__pyx_v_tol = .1;
|
|
|
|
/* "sklearn/svm/libsvm.pyx":261
|
|
* cdef int shrinking = 0
|
|
* cdef double tol = .1
|
|
* cdef int random_seed = -1 # <<<<<<<<<<<<<<
|
|
*
|
|
* kernel_index = LIBSVM_KERNEL_TYPES.index(kernel)
|
|
*/
|
|
__pyx_v_random_seed = -1;
|
|
|
|
/* "sklearn/svm/libsvm.pyx":263
|
|
* cdef int random_seed = -1
|
|
*
|
|
* kernel_index = LIBSVM_KERNEL_TYPES.index(kernel) # <<<<<<<<<<<<<<
|
|
*
|
|
* set_parameter(param, svm_type, kernel_index, degree, gamma, coef0, nu,
|
|
*/
|
|
__pyx_t_1 = __Pyx_GetModuleGlobalName(__pyx_n_s_LIBSVM_KERNEL_TYPES); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 263; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_1);
|
|
__pyx_t_2 = __Pyx_PyObject_GetAttrStr(__pyx_t_1, __pyx_n_s_index); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 263; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_2);
|
|
__Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0;
|
|
__pyx_t_1 = PyTuple_New(1); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 263; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_1);
|
|
__Pyx_INCREF(__pyx_v_kernel);
|
|
PyTuple_SET_ITEM(__pyx_t_1, 0, __pyx_v_kernel);
|
|
__Pyx_GIVEREF(__pyx_v_kernel);
|
|
__pyx_t_3 = __Pyx_PyObject_Call(__pyx_t_2, __pyx_t_1, NULL); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 263; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_3);
|
|
__Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0;
|
|
__Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0;
|
|
__pyx_v_kernel_index = __pyx_t_3;
|
|
__pyx_t_3 = 0;
|
|
|
|
/* "sklearn/svm/libsvm.pyx":265
|
|
* kernel_index = LIBSVM_KERNEL_TYPES.index(kernel)
|
|
*
|
|
* set_parameter(param, svm_type, kernel_index, degree, gamma, coef0, nu, # <<<<<<<<<<<<<<
|
|
* cache_size, C, tol, epsilon, shrinking, probability,
|
|
* nr_weight, weight_label, weight, max_iter, random_seed)
|
|
*/
|
|
__pyx_t_4 = __Pyx_PyInt_As_int(__pyx_v_kernel_index); if (unlikely((__pyx_t_4 == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 265; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
|
|
/* "sklearn/svm/libsvm.pyx":267
|
|
* set_parameter(param, svm_type, kernel_index, degree, gamma, coef0, nu,
|
|
* cache_size, C, tol, epsilon, shrinking, probability,
|
|
* nr_weight, weight_label, weight, max_iter, random_seed) # <<<<<<<<<<<<<<
|
|
*
|
|
*
|
|
*/
|
|
set_parameter(__pyx_v_param, __pyx_v_svm_type, __pyx_t_4, __pyx_v_degree, __pyx_v_gamma, __pyx_v_coef0, __pyx_v_nu, __pyx_v_cache_size, __pyx_v_C, __pyx_v_tol, __pyx_v_epsilon, __pyx_v_shrinking, __pyx_v_probability, __pyx_v_nr_weight, __pyx_v_weight_label, __pyx_v_weight, __pyx_v_max_iter, __pyx_v_random_seed);
|
|
|
|
/* "sklearn/svm/libsvm.pyx":248
|
|
*
|
|
*
|
|
* cdef void set_predict_params( # <<<<<<<<<<<<<<
|
|
* svm_parameter *param, int svm_type, kernel, int degree, double gamma,
|
|
* double coef0, double cache_size, int probability, int nr_weight,
|
|
*/
|
|
|
|
/* function exit code */
|
|
goto __pyx_L0;
|
|
__pyx_L1_error:;
|
|
__Pyx_XDECREF(__pyx_t_1);
|
|
__Pyx_XDECREF(__pyx_t_2);
|
|
__Pyx_XDECREF(__pyx_t_3);
|
|
__Pyx_AddTraceback("sklearn.svm.libsvm.set_predict_params", __pyx_clineno, __pyx_lineno, __pyx_filename);
|
|
__pyx_L0:;
|
|
__Pyx_XDECREF(__pyx_v_kernel_index);
|
|
__Pyx_RefNannyFinishContext();
|
|
}
|
|
|
|
/* "sklearn/svm/libsvm.pyx":270
|
|
*
|
|
*
|
|
* def predict(np.ndarray[np.float64_t, ndim=2, mode='c'] X, # <<<<<<<<<<<<<<
|
|
* np.ndarray[np.int32_t, ndim=1, mode='c'] support,
|
|
* np.ndarray[np.float64_t, ndim=2, mode='c'] SV,
|
|
*/
|
|
|
|
/* Python wrapper */
|
|
static PyObject *__pyx_pw_7sklearn_3svm_6libsvm_3predict(PyObject *__pyx_self, PyObject *__pyx_args, PyObject *__pyx_kwds); /*proto*/
|
|
static char __pyx_doc_7sklearn_3svm_6libsvm_2predict[] = "\n Predict target values of X given a model (low-level method)\n\n Parameters\n ----------\n X: array-like, dtype=float, size=[n_samples, n_features]\n svm_type : {0, 1, 2, 3, 4}\n Type of SVM: C SVC, nu SVC, one class, epsilon SVR, nu SVR\n kernel : {'linear', 'rbf', 'poly', 'sigmoid', 'precomputed'}\n Type of kernel.\n degree : int\n Degree of the polynomial kernel.\n gamma : float\n Gamma parameter in RBF kernel.\n coef0 : float\n Independent parameter in poly/sigmoid kernel.\n\n Returns\n -------\n dec_values : array\n predicted values.\n ";
|
|
static PyMethodDef __pyx_mdef_7sklearn_3svm_6libsvm_3predict = {__Pyx_NAMESTR("predict"), (PyCFunction)__pyx_pw_7sklearn_3svm_6libsvm_3predict, METH_VARARGS|METH_KEYWORDS, __Pyx_DOCSTR(__pyx_doc_7sklearn_3svm_6libsvm_2predict)};
|
|
static PyObject *__pyx_pw_7sklearn_3svm_6libsvm_3predict(PyObject *__pyx_self, PyObject *__pyx_args, PyObject *__pyx_kwds) {
|
|
PyArrayObject *__pyx_v_X = 0;
|
|
PyArrayObject *__pyx_v_support = 0;
|
|
PyArrayObject *__pyx_v_SV = 0;
|
|
PyArrayObject *__pyx_v_nSV = 0;
|
|
PyArrayObject *__pyx_v_sv_coef = 0;
|
|
PyArrayObject *__pyx_v_intercept = 0;
|
|
PyArrayObject *__pyx_v_probA = 0;
|
|
PyArrayObject *__pyx_v_probB = 0;
|
|
int __pyx_v_svm_type;
|
|
PyObject *__pyx_v_kernel = 0;
|
|
int __pyx_v_degree;
|
|
double __pyx_v_gamma;
|
|
double __pyx_v_coef0;
|
|
PyArrayObject *__pyx_v_class_weight = 0;
|
|
CYTHON_UNUSED PyArrayObject *__pyx_v_sample_weight = 0;
|
|
double __pyx_v_cache_size;
|
|
int __pyx_lineno = 0;
|
|
const char *__pyx_filename = NULL;
|
|
int __pyx_clineno = 0;
|
|
PyObject *__pyx_r = 0;
|
|
__Pyx_RefNannyDeclarations
|
|
__Pyx_RefNannySetupContext("predict (wrapper)", 0);
|
|
{
|
|
static PyObject **__pyx_pyargnames[] = {&__pyx_n_s_X,&__pyx_n_s_support,&__pyx_n_s_SV,&__pyx_n_s_nSV,&__pyx_n_s_sv_coef,&__pyx_n_s_intercept,&__pyx_n_s_probA,&__pyx_n_s_probB,&__pyx_n_s_svm_type,&__pyx_n_s_kernel,&__pyx_n_s_degree,&__pyx_n_s_gamma,&__pyx_n_s_coef0,&__pyx_n_s_class_weight,&__pyx_n_s_sample_weight,&__pyx_n_s_cache_size,0};
|
|
PyObject* values[16] = {0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0};
|
|
values[6] = (PyObject *)__pyx_k__10;
|
|
values[7] = (PyObject *)__pyx_k__11;
|
|
values[9] = ((PyObject *)__pyx_n_s_rbf);
|
|
values[13] = (PyObject *)__pyx_k__12;
|
|
values[14] = (PyObject *)__pyx_k__13;
|
|
if (unlikely(__pyx_kwds)) {
|
|
Py_ssize_t kw_args;
|
|
const Py_ssize_t pos_args = PyTuple_GET_SIZE(__pyx_args);
|
|
switch (pos_args) {
|
|
case 16: values[15] = PyTuple_GET_ITEM(__pyx_args, 15);
|
|
case 15: values[14] = PyTuple_GET_ITEM(__pyx_args, 14);
|
|
case 14: values[13] = PyTuple_GET_ITEM(__pyx_args, 13);
|
|
case 13: values[12] = PyTuple_GET_ITEM(__pyx_args, 12);
|
|
case 12: values[11] = PyTuple_GET_ITEM(__pyx_args, 11);
|
|
case 11: values[10] = PyTuple_GET_ITEM(__pyx_args, 10);
|
|
case 10: values[9] = PyTuple_GET_ITEM(__pyx_args, 9);
|
|
case 9: values[8] = PyTuple_GET_ITEM(__pyx_args, 8);
|
|
case 8: values[7] = PyTuple_GET_ITEM(__pyx_args, 7);
|
|
case 7: values[6] = PyTuple_GET_ITEM(__pyx_args, 6);
|
|
case 6: values[5] = PyTuple_GET_ITEM(__pyx_args, 5);
|
|
case 5: values[4] = PyTuple_GET_ITEM(__pyx_args, 4);
|
|
case 4: values[3] = PyTuple_GET_ITEM(__pyx_args, 3);
|
|
case 3: values[2] = PyTuple_GET_ITEM(__pyx_args, 2);
|
|
case 2: values[1] = PyTuple_GET_ITEM(__pyx_args, 1);
|
|
case 1: values[0] = PyTuple_GET_ITEM(__pyx_args, 0);
|
|
case 0: break;
|
|
default: goto __pyx_L5_argtuple_error;
|
|
}
|
|
kw_args = PyDict_Size(__pyx_kwds);
|
|
switch (pos_args) {
|
|
case 0:
|
|
if (likely((values[0] = PyDict_GetItem(__pyx_kwds, __pyx_n_s_X)) != 0)) kw_args--;
|
|
else goto __pyx_L5_argtuple_error;
|
|
case 1:
|
|
if (likely((values[1] = PyDict_GetItem(__pyx_kwds, __pyx_n_s_support)) != 0)) kw_args--;
|
|
else {
|
|
__Pyx_RaiseArgtupleInvalid("predict", 0, 6, 16, 1); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 270; __pyx_clineno = __LINE__; goto __pyx_L3_error;}
|
|
}
|
|
case 2:
|
|
if (likely((values[2] = PyDict_GetItem(__pyx_kwds, __pyx_n_s_SV)) != 0)) kw_args--;
|
|
else {
|
|
__Pyx_RaiseArgtupleInvalid("predict", 0, 6, 16, 2); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 270; __pyx_clineno = __LINE__; goto __pyx_L3_error;}
|
|
}
|
|
case 3:
|
|
if (likely((values[3] = PyDict_GetItem(__pyx_kwds, __pyx_n_s_nSV)) != 0)) kw_args--;
|
|
else {
|
|
__Pyx_RaiseArgtupleInvalid("predict", 0, 6, 16, 3); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 270; __pyx_clineno = __LINE__; goto __pyx_L3_error;}
|
|
}
|
|
case 4:
|
|
if (likely((values[4] = PyDict_GetItem(__pyx_kwds, __pyx_n_s_sv_coef)) != 0)) kw_args--;
|
|
else {
|
|
__Pyx_RaiseArgtupleInvalid("predict", 0, 6, 16, 4); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 270; __pyx_clineno = __LINE__; goto __pyx_L3_error;}
|
|
}
|
|
case 5:
|
|
if (likely((values[5] = PyDict_GetItem(__pyx_kwds, __pyx_n_s_intercept)) != 0)) kw_args--;
|
|
else {
|
|
__Pyx_RaiseArgtupleInvalid("predict", 0, 6, 16, 5); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 270; __pyx_clineno = __LINE__; goto __pyx_L3_error;}
|
|
}
|
|
case 6:
|
|
if (kw_args > 0) {
|
|
PyObject* value = PyDict_GetItem(__pyx_kwds, __pyx_n_s_probA);
|
|
if (value) { values[6] = value; kw_args--; }
|
|
}
|
|
case 7:
|
|
if (kw_args > 0) {
|
|
PyObject* value = PyDict_GetItem(__pyx_kwds, __pyx_n_s_probB);
|
|
if (value) { values[7] = value; kw_args--; }
|
|
}
|
|
case 8:
|
|
if (kw_args > 0) {
|
|
PyObject* value = PyDict_GetItem(__pyx_kwds, __pyx_n_s_svm_type);
|
|
if (value) { values[8] = value; kw_args--; }
|
|
}
|
|
case 9:
|
|
if (kw_args > 0) {
|
|
PyObject* value = PyDict_GetItem(__pyx_kwds, __pyx_n_s_kernel);
|
|
if (value) { values[9] = value; kw_args--; }
|
|
}
|
|
case 10:
|
|
if (kw_args > 0) {
|
|
PyObject* value = PyDict_GetItem(__pyx_kwds, __pyx_n_s_degree);
|
|
if (value) { values[10] = value; kw_args--; }
|
|
}
|
|
case 11:
|
|
if (kw_args > 0) {
|
|
PyObject* value = PyDict_GetItem(__pyx_kwds, __pyx_n_s_gamma);
|
|
if (value) { values[11] = value; kw_args--; }
|
|
}
|
|
case 12:
|
|
if (kw_args > 0) {
|
|
PyObject* value = PyDict_GetItem(__pyx_kwds, __pyx_n_s_coef0);
|
|
if (value) { values[12] = value; kw_args--; }
|
|
}
|
|
case 13:
|
|
if (kw_args > 0) {
|
|
PyObject* value = PyDict_GetItem(__pyx_kwds, __pyx_n_s_class_weight);
|
|
if (value) { values[13] = value; kw_args--; }
|
|
}
|
|
case 14:
|
|
if (kw_args > 0) {
|
|
PyObject* value = PyDict_GetItem(__pyx_kwds, __pyx_n_s_sample_weight);
|
|
if (value) { values[14] = value; kw_args--; }
|
|
}
|
|
case 15:
|
|
if (kw_args > 0) {
|
|
PyObject* value = PyDict_GetItem(__pyx_kwds, __pyx_n_s_cache_size);
|
|
if (value) { values[15] = value; kw_args--; }
|
|
}
|
|
}
|
|
if (unlikely(kw_args > 0)) {
|
|
if (unlikely(__Pyx_ParseOptionalKeywords(__pyx_kwds, __pyx_pyargnames, 0, values, pos_args, "predict") < 0)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 270; __pyx_clineno = __LINE__; goto __pyx_L3_error;}
|
|
}
|
|
} else {
|
|
switch (PyTuple_GET_SIZE(__pyx_args)) {
|
|
case 16: values[15] = PyTuple_GET_ITEM(__pyx_args, 15);
|
|
case 15: values[14] = PyTuple_GET_ITEM(__pyx_args, 14);
|
|
case 14: values[13] = PyTuple_GET_ITEM(__pyx_args, 13);
|
|
case 13: values[12] = PyTuple_GET_ITEM(__pyx_args, 12);
|
|
case 12: values[11] = PyTuple_GET_ITEM(__pyx_args, 11);
|
|
case 11: values[10] = PyTuple_GET_ITEM(__pyx_args, 10);
|
|
case 10: values[9] = PyTuple_GET_ITEM(__pyx_args, 9);
|
|
case 9: values[8] = PyTuple_GET_ITEM(__pyx_args, 8);
|
|
case 8: values[7] = PyTuple_GET_ITEM(__pyx_args, 7);
|
|
case 7: values[6] = PyTuple_GET_ITEM(__pyx_args, 6);
|
|
case 6: values[5] = PyTuple_GET_ITEM(__pyx_args, 5);
|
|
values[4] = PyTuple_GET_ITEM(__pyx_args, 4);
|
|
values[3] = PyTuple_GET_ITEM(__pyx_args, 3);
|
|
values[2] = PyTuple_GET_ITEM(__pyx_args, 2);
|
|
values[1] = PyTuple_GET_ITEM(__pyx_args, 1);
|
|
values[0] = PyTuple_GET_ITEM(__pyx_args, 0);
|
|
break;
|
|
default: goto __pyx_L5_argtuple_error;
|
|
}
|
|
}
|
|
__pyx_v_X = ((PyArrayObject *)values[0]);
|
|
__pyx_v_support = ((PyArrayObject *)values[1]);
|
|
__pyx_v_SV = ((PyArrayObject *)values[2]);
|
|
__pyx_v_nSV = ((PyArrayObject *)values[3]);
|
|
__pyx_v_sv_coef = ((PyArrayObject *)values[4]);
|
|
__pyx_v_intercept = ((PyArrayObject *)values[5]);
|
|
__pyx_v_probA = ((PyArrayObject *)values[6]);
|
|
__pyx_v_probB = ((PyArrayObject *)values[7]);
|
|
if (values[8]) {
|
|
__pyx_v_svm_type = __Pyx_PyInt_As_int(values[8]); if (unlikely((__pyx_v_svm_type == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 278; __pyx_clineno = __LINE__; goto __pyx_L3_error;}
|
|
} else {
|
|
__pyx_v_svm_type = ((int)0);
|
|
}
|
|
__pyx_v_kernel = values[9];
|
|
if (values[10]) {
|
|
__pyx_v_degree = __Pyx_PyInt_As_int(values[10]); if (unlikely((__pyx_v_degree == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 278; __pyx_clineno = __LINE__; goto __pyx_L3_error;}
|
|
} else {
|
|
__pyx_v_degree = ((int)3);
|
|
}
|
|
if (values[11]) {
|
|
__pyx_v_gamma = __pyx_PyFloat_AsDouble(values[11]); if (unlikely((__pyx_v_gamma == (double)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 279; __pyx_clineno = __LINE__; goto __pyx_L3_error;}
|
|
} else {
|
|
__pyx_v_gamma = ((double)0.1);
|
|
}
|
|
if (values[12]) {
|
|
__pyx_v_coef0 = __pyx_PyFloat_AsDouble(values[12]); if (unlikely((__pyx_v_coef0 == (double)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 279; __pyx_clineno = __LINE__; goto __pyx_L3_error;}
|
|
} else {
|
|
__pyx_v_coef0 = ((double)0.);
|
|
}
|
|
__pyx_v_class_weight = ((PyArrayObject *)values[13]);
|
|
__pyx_v_sample_weight = ((PyArrayObject *)values[14]);
|
|
if (values[15]) {
|
|
__pyx_v_cache_size = __pyx_PyFloat_AsDouble(values[15]); if (unlikely((__pyx_v_cache_size == (double)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 284; __pyx_clineno = __LINE__; goto __pyx_L3_error;}
|
|
} else {
|
|
__pyx_v_cache_size = ((double)100.);
|
|
}
|
|
}
|
|
goto __pyx_L4_argument_unpacking_done;
|
|
__pyx_L5_argtuple_error:;
|
|
__Pyx_RaiseArgtupleInvalid("predict", 0, 6, 16, PyTuple_GET_SIZE(__pyx_args)); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 270; __pyx_clineno = __LINE__; goto __pyx_L3_error;}
|
|
__pyx_L3_error:;
|
|
__Pyx_AddTraceback("sklearn.svm.libsvm.predict", __pyx_clineno, __pyx_lineno, __pyx_filename);
|
|
__Pyx_RefNannyFinishContext();
|
|
return NULL;
|
|
__pyx_L4_argument_unpacking_done:;
|
|
if (unlikely(!__Pyx_ArgTypeTest(((PyObject *)__pyx_v_X), __pyx_ptype_5numpy_ndarray, 1, "X", 0))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 270; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
if (unlikely(!__Pyx_ArgTypeTest(((PyObject *)__pyx_v_support), __pyx_ptype_5numpy_ndarray, 1, "support", 0))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 271; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
if (unlikely(!__Pyx_ArgTypeTest(((PyObject *)__pyx_v_SV), __pyx_ptype_5numpy_ndarray, 1, "SV", 0))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 272; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
if (unlikely(!__Pyx_ArgTypeTest(((PyObject *)__pyx_v_nSV), __pyx_ptype_5numpy_ndarray, 1, "nSV", 0))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 273; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
if (unlikely(!__Pyx_ArgTypeTest(((PyObject *)__pyx_v_sv_coef), __pyx_ptype_5numpy_ndarray, 1, "sv_coef", 0))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 274; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
if (unlikely(!__Pyx_ArgTypeTest(((PyObject *)__pyx_v_intercept), __pyx_ptype_5numpy_ndarray, 1, "intercept", 0))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 275; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
if (unlikely(!__Pyx_ArgTypeTest(((PyObject *)__pyx_v_probA), __pyx_ptype_5numpy_ndarray, 1, "probA", 0))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 276; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
if (unlikely(!__Pyx_ArgTypeTest(((PyObject *)__pyx_v_probB), __pyx_ptype_5numpy_ndarray, 1, "probB", 0))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 277; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
if (unlikely(!__Pyx_ArgTypeTest(((PyObject *)__pyx_v_class_weight), __pyx_ptype_5numpy_ndarray, 1, "class_weight", 0))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 280; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
if (unlikely(!__Pyx_ArgTypeTest(((PyObject *)__pyx_v_sample_weight), __pyx_ptype_5numpy_ndarray, 1, "sample_weight", 0))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 282; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__pyx_r = __pyx_pf_7sklearn_3svm_6libsvm_2predict(__pyx_self, __pyx_v_X, __pyx_v_support, __pyx_v_SV, __pyx_v_nSV, __pyx_v_sv_coef, __pyx_v_intercept, __pyx_v_probA, __pyx_v_probB, __pyx_v_svm_type, __pyx_v_kernel, __pyx_v_degree, __pyx_v_gamma, __pyx_v_coef0, __pyx_v_class_weight, __pyx_v_sample_weight, __pyx_v_cache_size);
|
|
|
|
/* function exit code */
|
|
goto __pyx_L0;
|
|
__pyx_L1_error:;
|
|
__pyx_r = NULL;
|
|
__pyx_L0:;
|
|
__Pyx_RefNannyFinishContext();
|
|
return __pyx_r;
|
|
}
|
|
|
|
static PyObject *__pyx_pf_7sklearn_3svm_6libsvm_2predict(CYTHON_UNUSED PyObject *__pyx_self, PyArrayObject *__pyx_v_X, PyArrayObject *__pyx_v_support, PyArrayObject *__pyx_v_SV, PyArrayObject *__pyx_v_nSV, PyArrayObject *__pyx_v_sv_coef, PyArrayObject *__pyx_v_intercept, PyArrayObject *__pyx_v_probA, PyArrayObject *__pyx_v_probB, int __pyx_v_svm_type, PyObject *__pyx_v_kernel, int __pyx_v_degree, double __pyx_v_gamma, double __pyx_v_coef0, PyArrayObject *__pyx_v_class_weight, CYTHON_UNUSED PyArrayObject *__pyx_v_sample_weight, double __pyx_v_cache_size) {
|
|
PyArrayObject *__pyx_v_dec_values = 0;
|
|
struct svm_parameter __pyx_v_param;
|
|
struct svm_model *__pyx_v_model;
|
|
int __pyx_v_rv;
|
|
PyArrayObject *__pyx_v_class_weight_label = 0;
|
|
__Pyx_LocalBuf_ND __pyx_pybuffernd_SV;
|
|
__Pyx_Buffer __pyx_pybuffer_SV;
|
|
__Pyx_LocalBuf_ND __pyx_pybuffernd_X;
|
|
__Pyx_Buffer __pyx_pybuffer_X;
|
|
__Pyx_LocalBuf_ND __pyx_pybuffernd_class_weight;
|
|
__Pyx_Buffer __pyx_pybuffer_class_weight;
|
|
__Pyx_LocalBuf_ND __pyx_pybuffernd_class_weight_label;
|
|
__Pyx_Buffer __pyx_pybuffer_class_weight_label;
|
|
__Pyx_LocalBuf_ND __pyx_pybuffernd_dec_values;
|
|
__Pyx_Buffer __pyx_pybuffer_dec_values;
|
|
__Pyx_LocalBuf_ND __pyx_pybuffernd_intercept;
|
|
__Pyx_Buffer __pyx_pybuffer_intercept;
|
|
__Pyx_LocalBuf_ND __pyx_pybuffernd_nSV;
|
|
__Pyx_Buffer __pyx_pybuffer_nSV;
|
|
__Pyx_LocalBuf_ND __pyx_pybuffernd_probA;
|
|
__Pyx_Buffer __pyx_pybuffer_probA;
|
|
__Pyx_LocalBuf_ND __pyx_pybuffernd_probB;
|
|
__Pyx_Buffer __pyx_pybuffer_probB;
|
|
__Pyx_LocalBuf_ND __pyx_pybuffernd_sample_weight;
|
|
__Pyx_Buffer __pyx_pybuffer_sample_weight;
|
|
__Pyx_LocalBuf_ND __pyx_pybuffernd_support;
|
|
__Pyx_Buffer __pyx_pybuffer_support;
|
|
__Pyx_LocalBuf_ND __pyx_pybuffernd_sv_coef;
|
|
__Pyx_Buffer __pyx_pybuffer_sv_coef;
|
|
PyObject *__pyx_r = NULL;
|
|
__Pyx_RefNannyDeclarations
|
|
PyObject *__pyx_t_1 = NULL;
|
|
PyObject *__pyx_t_2 = NULL;
|
|
PyObject *__pyx_t_3 = NULL;
|
|
PyObject *__pyx_t_4 = NULL;
|
|
PyObject *__pyx_t_5 = NULL;
|
|
PyArrayObject *__pyx_t_6 = NULL;
|
|
PyArrayObject *__pyx_t_7 = NULL;
|
|
int __pyx_t_8;
|
|
PyObject *__pyx_t_9 = NULL;
|
|
PyObject *__pyx_t_10 = NULL;
|
|
PyObject *__pyx_t_11 = NULL;
|
|
int __pyx_t_12;
|
|
int __pyx_t_13;
|
|
char const *__pyx_t_14;
|
|
PyObject *__pyx_t_15 = NULL;
|
|
PyObject *__pyx_t_16 = NULL;
|
|
PyObject *__pyx_t_17 = NULL;
|
|
int __pyx_lineno = 0;
|
|
const char *__pyx_filename = NULL;
|
|
int __pyx_clineno = 0;
|
|
__Pyx_RefNannySetupContext("predict", 0);
|
|
__pyx_pybuffer_dec_values.pybuffer.buf = NULL;
|
|
__pyx_pybuffer_dec_values.refcount = 0;
|
|
__pyx_pybuffernd_dec_values.data = NULL;
|
|
__pyx_pybuffernd_dec_values.rcbuffer = &__pyx_pybuffer_dec_values;
|
|
__pyx_pybuffer_class_weight_label.pybuffer.buf = NULL;
|
|
__pyx_pybuffer_class_weight_label.refcount = 0;
|
|
__pyx_pybuffernd_class_weight_label.data = NULL;
|
|
__pyx_pybuffernd_class_weight_label.rcbuffer = &__pyx_pybuffer_class_weight_label;
|
|
__pyx_pybuffer_X.pybuffer.buf = NULL;
|
|
__pyx_pybuffer_X.refcount = 0;
|
|
__pyx_pybuffernd_X.data = NULL;
|
|
__pyx_pybuffernd_X.rcbuffer = &__pyx_pybuffer_X;
|
|
__pyx_pybuffer_support.pybuffer.buf = NULL;
|
|
__pyx_pybuffer_support.refcount = 0;
|
|
__pyx_pybuffernd_support.data = NULL;
|
|
__pyx_pybuffernd_support.rcbuffer = &__pyx_pybuffer_support;
|
|
__pyx_pybuffer_SV.pybuffer.buf = NULL;
|
|
__pyx_pybuffer_SV.refcount = 0;
|
|
__pyx_pybuffernd_SV.data = NULL;
|
|
__pyx_pybuffernd_SV.rcbuffer = &__pyx_pybuffer_SV;
|
|
__pyx_pybuffer_nSV.pybuffer.buf = NULL;
|
|
__pyx_pybuffer_nSV.refcount = 0;
|
|
__pyx_pybuffernd_nSV.data = NULL;
|
|
__pyx_pybuffernd_nSV.rcbuffer = &__pyx_pybuffer_nSV;
|
|
__pyx_pybuffer_sv_coef.pybuffer.buf = NULL;
|
|
__pyx_pybuffer_sv_coef.refcount = 0;
|
|
__pyx_pybuffernd_sv_coef.data = NULL;
|
|
__pyx_pybuffernd_sv_coef.rcbuffer = &__pyx_pybuffer_sv_coef;
|
|
__pyx_pybuffer_intercept.pybuffer.buf = NULL;
|
|
__pyx_pybuffer_intercept.refcount = 0;
|
|
__pyx_pybuffernd_intercept.data = NULL;
|
|
__pyx_pybuffernd_intercept.rcbuffer = &__pyx_pybuffer_intercept;
|
|
__pyx_pybuffer_probA.pybuffer.buf = NULL;
|
|
__pyx_pybuffer_probA.refcount = 0;
|
|
__pyx_pybuffernd_probA.data = NULL;
|
|
__pyx_pybuffernd_probA.rcbuffer = &__pyx_pybuffer_probA;
|
|
__pyx_pybuffer_probB.pybuffer.buf = NULL;
|
|
__pyx_pybuffer_probB.refcount = 0;
|
|
__pyx_pybuffernd_probB.data = NULL;
|
|
__pyx_pybuffernd_probB.rcbuffer = &__pyx_pybuffer_probB;
|
|
__pyx_pybuffer_class_weight.pybuffer.buf = NULL;
|
|
__pyx_pybuffer_class_weight.refcount = 0;
|
|
__pyx_pybuffernd_class_weight.data = NULL;
|
|
__pyx_pybuffernd_class_weight.rcbuffer = &__pyx_pybuffer_class_weight;
|
|
__pyx_pybuffer_sample_weight.pybuffer.buf = NULL;
|
|
__pyx_pybuffer_sample_weight.refcount = 0;
|
|
__pyx_pybuffernd_sample_weight.data = NULL;
|
|
__pyx_pybuffernd_sample_weight.rcbuffer = &__pyx_pybuffer_sample_weight;
|
|
{
|
|
__Pyx_BufFmt_StackElem __pyx_stack[1];
|
|
if (unlikely(__Pyx_GetBufferAndValidate(&__pyx_pybuffernd_X.rcbuffer->pybuffer, (PyObject*)__pyx_v_X, &__Pyx_TypeInfo_nn___pyx_t_5numpy_float64_t, PyBUF_FORMAT| PyBUF_C_CONTIGUOUS, 2, 0, __pyx_stack) == -1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 270; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
}
|
|
__pyx_pybuffernd_X.diminfo[0].strides = __pyx_pybuffernd_X.rcbuffer->pybuffer.strides[0]; __pyx_pybuffernd_X.diminfo[0].shape = __pyx_pybuffernd_X.rcbuffer->pybuffer.shape[0]; __pyx_pybuffernd_X.diminfo[1].strides = __pyx_pybuffernd_X.rcbuffer->pybuffer.strides[1]; __pyx_pybuffernd_X.diminfo[1].shape = __pyx_pybuffernd_X.rcbuffer->pybuffer.shape[1];
|
|
{
|
|
__Pyx_BufFmt_StackElem __pyx_stack[1];
|
|
if (unlikely(__Pyx_GetBufferAndValidate(&__pyx_pybuffernd_support.rcbuffer->pybuffer, (PyObject*)__pyx_v_support, &__Pyx_TypeInfo_nn___pyx_t_5numpy_int32_t, PyBUF_FORMAT| PyBUF_C_CONTIGUOUS, 1, 0, __pyx_stack) == -1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 270; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
}
|
|
__pyx_pybuffernd_support.diminfo[0].strides = __pyx_pybuffernd_support.rcbuffer->pybuffer.strides[0]; __pyx_pybuffernd_support.diminfo[0].shape = __pyx_pybuffernd_support.rcbuffer->pybuffer.shape[0];
|
|
{
|
|
__Pyx_BufFmt_StackElem __pyx_stack[1];
|
|
if (unlikely(__Pyx_GetBufferAndValidate(&__pyx_pybuffernd_SV.rcbuffer->pybuffer, (PyObject*)__pyx_v_SV, &__Pyx_TypeInfo_nn___pyx_t_5numpy_float64_t, PyBUF_FORMAT| PyBUF_C_CONTIGUOUS, 2, 0, __pyx_stack) == -1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 270; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
}
|
|
__pyx_pybuffernd_SV.diminfo[0].strides = __pyx_pybuffernd_SV.rcbuffer->pybuffer.strides[0]; __pyx_pybuffernd_SV.diminfo[0].shape = __pyx_pybuffernd_SV.rcbuffer->pybuffer.shape[0]; __pyx_pybuffernd_SV.diminfo[1].strides = __pyx_pybuffernd_SV.rcbuffer->pybuffer.strides[1]; __pyx_pybuffernd_SV.diminfo[1].shape = __pyx_pybuffernd_SV.rcbuffer->pybuffer.shape[1];
|
|
{
|
|
__Pyx_BufFmt_StackElem __pyx_stack[1];
|
|
if (unlikely(__Pyx_GetBufferAndValidate(&__pyx_pybuffernd_nSV.rcbuffer->pybuffer, (PyObject*)__pyx_v_nSV, &__Pyx_TypeInfo_nn___pyx_t_5numpy_int32_t, PyBUF_FORMAT| PyBUF_C_CONTIGUOUS, 1, 0, __pyx_stack) == -1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 270; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
}
|
|
__pyx_pybuffernd_nSV.diminfo[0].strides = __pyx_pybuffernd_nSV.rcbuffer->pybuffer.strides[0]; __pyx_pybuffernd_nSV.diminfo[0].shape = __pyx_pybuffernd_nSV.rcbuffer->pybuffer.shape[0];
|
|
{
|
|
__Pyx_BufFmt_StackElem __pyx_stack[1];
|
|
if (unlikely(__Pyx_GetBufferAndValidate(&__pyx_pybuffernd_sv_coef.rcbuffer->pybuffer, (PyObject*)__pyx_v_sv_coef, &__Pyx_TypeInfo_nn___pyx_t_5numpy_float64_t, PyBUF_FORMAT| PyBUF_C_CONTIGUOUS, 2, 0, __pyx_stack) == -1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 270; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
}
|
|
__pyx_pybuffernd_sv_coef.diminfo[0].strides = __pyx_pybuffernd_sv_coef.rcbuffer->pybuffer.strides[0]; __pyx_pybuffernd_sv_coef.diminfo[0].shape = __pyx_pybuffernd_sv_coef.rcbuffer->pybuffer.shape[0]; __pyx_pybuffernd_sv_coef.diminfo[1].strides = __pyx_pybuffernd_sv_coef.rcbuffer->pybuffer.strides[1]; __pyx_pybuffernd_sv_coef.diminfo[1].shape = __pyx_pybuffernd_sv_coef.rcbuffer->pybuffer.shape[1];
|
|
{
|
|
__Pyx_BufFmt_StackElem __pyx_stack[1];
|
|
if (unlikely(__Pyx_GetBufferAndValidate(&__pyx_pybuffernd_intercept.rcbuffer->pybuffer, (PyObject*)__pyx_v_intercept, &__Pyx_TypeInfo_nn___pyx_t_5numpy_float64_t, PyBUF_FORMAT| PyBUF_C_CONTIGUOUS, 1, 0, __pyx_stack) == -1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 270; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
}
|
|
__pyx_pybuffernd_intercept.diminfo[0].strides = __pyx_pybuffernd_intercept.rcbuffer->pybuffer.strides[0]; __pyx_pybuffernd_intercept.diminfo[0].shape = __pyx_pybuffernd_intercept.rcbuffer->pybuffer.shape[0];
|
|
{
|
|
__Pyx_BufFmt_StackElem __pyx_stack[1];
|
|
if (unlikely(__Pyx_GetBufferAndValidate(&__pyx_pybuffernd_probA.rcbuffer->pybuffer, (PyObject*)__pyx_v_probA, &__Pyx_TypeInfo_nn___pyx_t_5numpy_float64_t, PyBUF_FORMAT| PyBUF_C_CONTIGUOUS, 1, 0, __pyx_stack) == -1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 270; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
}
|
|
__pyx_pybuffernd_probA.diminfo[0].strides = __pyx_pybuffernd_probA.rcbuffer->pybuffer.strides[0]; __pyx_pybuffernd_probA.diminfo[0].shape = __pyx_pybuffernd_probA.rcbuffer->pybuffer.shape[0];
|
|
{
|
|
__Pyx_BufFmt_StackElem __pyx_stack[1];
|
|
if (unlikely(__Pyx_GetBufferAndValidate(&__pyx_pybuffernd_probB.rcbuffer->pybuffer, (PyObject*)__pyx_v_probB, &__Pyx_TypeInfo_nn___pyx_t_5numpy_float64_t, PyBUF_FORMAT| PyBUF_C_CONTIGUOUS, 1, 0, __pyx_stack) == -1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 270; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
}
|
|
__pyx_pybuffernd_probB.diminfo[0].strides = __pyx_pybuffernd_probB.rcbuffer->pybuffer.strides[0]; __pyx_pybuffernd_probB.diminfo[0].shape = __pyx_pybuffernd_probB.rcbuffer->pybuffer.shape[0];
|
|
{
|
|
__Pyx_BufFmt_StackElem __pyx_stack[1];
|
|
if (unlikely(__Pyx_GetBufferAndValidate(&__pyx_pybuffernd_class_weight.rcbuffer->pybuffer, (PyObject*)__pyx_v_class_weight, &__Pyx_TypeInfo_nn___pyx_t_5numpy_float64_t, PyBUF_FORMAT| PyBUF_C_CONTIGUOUS, 1, 0, __pyx_stack) == -1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 270; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
}
|
|
__pyx_pybuffernd_class_weight.diminfo[0].strides = __pyx_pybuffernd_class_weight.rcbuffer->pybuffer.strides[0]; __pyx_pybuffernd_class_weight.diminfo[0].shape = __pyx_pybuffernd_class_weight.rcbuffer->pybuffer.shape[0];
|
|
{
|
|
__Pyx_BufFmt_StackElem __pyx_stack[1];
|
|
if (unlikely(__Pyx_GetBufferAndValidate(&__pyx_pybuffernd_sample_weight.rcbuffer->pybuffer, (PyObject*)__pyx_v_sample_weight, &__Pyx_TypeInfo_nn___pyx_t_5numpy_float64_t, PyBUF_FORMAT| PyBUF_C_CONTIGUOUS, 1, 0, __pyx_stack) == -1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 270; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
}
|
|
__pyx_pybuffernd_sample_weight.diminfo[0].strides = __pyx_pybuffernd_sample_weight.rcbuffer->pybuffer.strides[0]; __pyx_pybuffernd_sample_weight.diminfo[0].shape = __pyx_pybuffernd_sample_weight.rcbuffer->pybuffer.shape[0];
|
|
|
|
/* "sklearn/svm/libsvm.pyx":313
|
|
*
|
|
* cdef np.ndarray[np.int32_t, ndim=1, mode='c'] \
|
|
* class_weight_label = np.arange(class_weight.shape[0], dtype=np.int32) # <<<<<<<<<<<<<<
|
|
*
|
|
* set_predict_params(¶m, svm_type, kernel, degree, gamma, coef0,
|
|
*/
|
|
__pyx_t_1 = __Pyx_GetModuleGlobalName(__pyx_n_s_np); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 313; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_1);
|
|
__pyx_t_2 = __Pyx_PyObject_GetAttrStr(__pyx_t_1, __pyx_n_s_arange); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 313; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_2);
|
|
__Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0;
|
|
__pyx_t_1 = __Pyx_PyInt_From_Py_intptr_t((__pyx_v_class_weight->dimensions[0])); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 313; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_1);
|
|
__pyx_t_3 = PyTuple_New(1); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 313; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_3);
|
|
PyTuple_SET_ITEM(__pyx_t_3, 0, __pyx_t_1);
|
|
__Pyx_GIVEREF(__pyx_t_1);
|
|
__pyx_t_1 = 0;
|
|
__pyx_t_1 = PyDict_New(); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 313; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_1);
|
|
__pyx_t_4 = __Pyx_GetModuleGlobalName(__pyx_n_s_np); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 313; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_4);
|
|
__pyx_t_5 = __Pyx_PyObject_GetAttrStr(__pyx_t_4, __pyx_n_s_int32); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 313; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_5);
|
|
__Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0;
|
|
if (PyDict_SetItem(__pyx_t_1, __pyx_n_s_dtype, __pyx_t_5) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 313; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_DECREF(__pyx_t_5); __pyx_t_5 = 0;
|
|
__pyx_t_5 = __Pyx_PyObject_Call(__pyx_t_2, __pyx_t_3, __pyx_t_1); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 313; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_5);
|
|
__Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0;
|
|
__Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0;
|
|
__Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0;
|
|
if (!(likely(((__pyx_t_5) == Py_None) || likely(__Pyx_TypeTest(__pyx_t_5, __pyx_ptype_5numpy_ndarray))))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 313; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__pyx_t_6 = ((PyArrayObject *)__pyx_t_5);
|
|
{
|
|
__Pyx_BufFmt_StackElem __pyx_stack[1];
|
|
if (unlikely(__Pyx_GetBufferAndValidate(&__pyx_pybuffernd_class_weight_label.rcbuffer->pybuffer, (PyObject*)__pyx_t_6, &__Pyx_TypeInfo_nn___pyx_t_5numpy_int32_t, PyBUF_FORMAT| PyBUF_C_CONTIGUOUS, 1, 0, __pyx_stack) == -1)) {
|
|
__pyx_v_class_weight_label = ((PyArrayObject *)Py_None); __Pyx_INCREF(Py_None); __pyx_pybuffernd_class_weight_label.rcbuffer->pybuffer.buf = NULL;
|
|
{__pyx_filename = __pyx_f[0]; __pyx_lineno = 312; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
} else {__pyx_pybuffernd_class_weight_label.diminfo[0].strides = __pyx_pybuffernd_class_weight_label.rcbuffer->pybuffer.strides[0]; __pyx_pybuffernd_class_weight_label.diminfo[0].shape = __pyx_pybuffernd_class_weight_label.rcbuffer->pybuffer.shape[0];
|
|
}
|
|
}
|
|
__pyx_t_6 = 0;
|
|
__pyx_v_class_weight_label = ((PyArrayObject *)__pyx_t_5);
|
|
__pyx_t_5 = 0;
|
|
|
|
/* "sklearn/svm/libsvm.pyx":315
|
|
* class_weight_label = np.arange(class_weight.shape[0], dtype=np.int32)
|
|
*
|
|
* set_predict_params(¶m, svm_type, kernel, degree, gamma, coef0, # <<<<<<<<<<<<<<
|
|
* cache_size, 0, <int>class_weight.shape[0],
|
|
* class_weight_label.data, class_weight.data)
|
|
*/
|
|
__pyx_f_7sklearn_3svm_6libsvm_set_predict_params((&__pyx_v_param), __pyx_v_svm_type, __pyx_v_kernel, __pyx_v_degree, __pyx_v_gamma, __pyx_v_coef0, __pyx_v_cache_size, 0, ((int)(__pyx_v_class_weight->dimensions[0])), __pyx_v_class_weight_label->data, __pyx_v_class_weight->data); if (unlikely(PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 315; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
|
|
/* "sklearn/svm/libsvm.pyx":318
|
|
* cache_size, 0, <int>class_weight.shape[0],
|
|
* class_weight_label.data, class_weight.data)
|
|
* model = set_model(¶m, <int> nSV.shape[0], SV.data, SV.shape, # <<<<<<<<<<<<<<
|
|
* support.data, support.shape, sv_coef.strides,
|
|
* sv_coef.data, intercept.data, nSV.data, probA.data, probB.data)
|
|
*/
|
|
__pyx_v_model = set_model((&__pyx_v_param), ((int)(__pyx_v_nSV->dimensions[0])), __pyx_v_SV->data, __pyx_v_SV->dimensions, __pyx_v_support->data, __pyx_v_support->dimensions, __pyx_v_sv_coef->strides, __pyx_v_sv_coef->data, __pyx_v_intercept->data, __pyx_v_nSV->data, __pyx_v_probA->data, __pyx_v_probB->data);
|
|
|
|
/* "sklearn/svm/libsvm.pyx":323
|
|
*
|
|
* #TODO: use check_model
|
|
* try: # <<<<<<<<<<<<<<
|
|
* dec_values = np.empty(X.shape[0])
|
|
* with nogil:
|
|
*/
|
|
/*try:*/ {
|
|
|
|
/* "sklearn/svm/libsvm.pyx":324
|
|
* #TODO: use check_model
|
|
* try:
|
|
* dec_values = np.empty(X.shape[0]) # <<<<<<<<<<<<<<
|
|
* with nogil:
|
|
* rv = copy_predict(X.data, model, X.shape, dec_values.data)
|
|
*/
|
|
__pyx_t_5 = __Pyx_GetModuleGlobalName(__pyx_n_s_np); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 324; __pyx_clineno = __LINE__; goto __pyx_L4_error;}
|
|
__Pyx_GOTREF(__pyx_t_5);
|
|
__pyx_t_1 = __Pyx_PyObject_GetAttrStr(__pyx_t_5, __pyx_n_s_empty); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 324; __pyx_clineno = __LINE__; goto __pyx_L4_error;}
|
|
__Pyx_GOTREF(__pyx_t_1);
|
|
__Pyx_DECREF(__pyx_t_5); __pyx_t_5 = 0;
|
|
__pyx_t_5 = __Pyx_PyInt_From_Py_intptr_t((__pyx_v_X->dimensions[0])); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 324; __pyx_clineno = __LINE__; goto __pyx_L4_error;}
|
|
__Pyx_GOTREF(__pyx_t_5);
|
|
__pyx_t_3 = PyTuple_New(1); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 324; __pyx_clineno = __LINE__; goto __pyx_L4_error;}
|
|
__Pyx_GOTREF(__pyx_t_3);
|
|
PyTuple_SET_ITEM(__pyx_t_3, 0, __pyx_t_5);
|
|
__Pyx_GIVEREF(__pyx_t_5);
|
|
__pyx_t_5 = 0;
|
|
__pyx_t_5 = __Pyx_PyObject_Call(__pyx_t_1, __pyx_t_3, NULL); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 324; __pyx_clineno = __LINE__; goto __pyx_L4_error;}
|
|
__Pyx_GOTREF(__pyx_t_5);
|
|
__Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0;
|
|
__Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0;
|
|
if (!(likely(((__pyx_t_5) == Py_None) || likely(__Pyx_TypeTest(__pyx_t_5, __pyx_ptype_5numpy_ndarray))))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 324; __pyx_clineno = __LINE__; goto __pyx_L4_error;}
|
|
__pyx_t_7 = ((PyArrayObject *)__pyx_t_5);
|
|
{
|
|
__Pyx_BufFmt_StackElem __pyx_stack[1];
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_dec_values.rcbuffer->pybuffer);
|
|
__pyx_t_8 = __Pyx_GetBufferAndValidate(&__pyx_pybuffernd_dec_values.rcbuffer->pybuffer, (PyObject*)__pyx_t_7, &__Pyx_TypeInfo_nn___pyx_t_5numpy_float64_t, PyBUF_FORMAT| PyBUF_C_CONTIGUOUS, 1, 0, __pyx_stack);
|
|
if (unlikely(__pyx_t_8 < 0)) {
|
|
PyErr_Fetch(&__pyx_t_9, &__pyx_t_10, &__pyx_t_11);
|
|
if (unlikely(__Pyx_GetBufferAndValidate(&__pyx_pybuffernd_dec_values.rcbuffer->pybuffer, (PyObject*)__pyx_v_dec_values, &__Pyx_TypeInfo_nn___pyx_t_5numpy_float64_t, PyBUF_FORMAT| PyBUF_C_CONTIGUOUS, 1, 0, __pyx_stack) == -1)) {
|
|
Py_XDECREF(__pyx_t_9); Py_XDECREF(__pyx_t_10); Py_XDECREF(__pyx_t_11);
|
|
__Pyx_RaiseBufferFallbackError();
|
|
} else {
|
|
PyErr_Restore(__pyx_t_9, __pyx_t_10, __pyx_t_11);
|
|
}
|
|
}
|
|
__pyx_pybuffernd_dec_values.diminfo[0].strides = __pyx_pybuffernd_dec_values.rcbuffer->pybuffer.strides[0]; __pyx_pybuffernd_dec_values.diminfo[0].shape = __pyx_pybuffernd_dec_values.rcbuffer->pybuffer.shape[0];
|
|
if (unlikely(__pyx_t_8 < 0)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 324; __pyx_clineno = __LINE__; goto __pyx_L4_error;}
|
|
}
|
|
__pyx_t_7 = 0;
|
|
__pyx_v_dec_values = ((PyArrayObject *)__pyx_t_5);
|
|
__pyx_t_5 = 0;
|
|
|
|
/* "sklearn/svm/libsvm.pyx":325
|
|
* try:
|
|
* dec_values = np.empty(X.shape[0])
|
|
* with nogil: # <<<<<<<<<<<<<<
|
|
* rv = copy_predict(X.data, model, X.shape, dec_values.data)
|
|
* if rv < 0:
|
|
*/
|
|
{
|
|
#ifdef WITH_THREAD
|
|
PyThreadState *_save;
|
|
Py_UNBLOCK_THREADS
|
|
#endif
|
|
/*try:*/ {
|
|
|
|
/* "sklearn/svm/libsvm.pyx":326
|
|
* dec_values = np.empty(X.shape[0])
|
|
* with nogil:
|
|
* rv = copy_predict(X.data, model, X.shape, dec_values.data) # <<<<<<<<<<<<<<
|
|
* if rv < 0:
|
|
* raise MemoryError("We've run out of memory")
|
|
*/
|
|
__pyx_v_rv = copy_predict(__pyx_v_X->data, __pyx_v_model, __pyx_v_X->dimensions, __pyx_v_dec_values->data);
|
|
}
|
|
|
|
/* "sklearn/svm/libsvm.pyx":325
|
|
* try:
|
|
* dec_values = np.empty(X.shape[0])
|
|
* with nogil: # <<<<<<<<<<<<<<
|
|
* rv = copy_predict(X.data, model, X.shape, dec_values.data)
|
|
* if rv < 0:
|
|
*/
|
|
/*finally:*/ {
|
|
/*normal exit:*/{
|
|
#ifdef WITH_THREAD
|
|
Py_BLOCK_THREADS
|
|
#endif
|
|
goto __pyx_L8;
|
|
}
|
|
__pyx_L8:;
|
|
}
|
|
}
|
|
|
|
/* "sklearn/svm/libsvm.pyx":327
|
|
* with nogil:
|
|
* rv = copy_predict(X.data, model, X.shape, dec_values.data)
|
|
* if rv < 0: # <<<<<<<<<<<<<<
|
|
* raise MemoryError("We've run out of memory")
|
|
* finally:
|
|
*/
|
|
__pyx_t_12 = ((__pyx_v_rv < 0) != 0);
|
|
if (__pyx_t_12) {
|
|
|
|
/* "sklearn/svm/libsvm.pyx":328
|
|
* rv = copy_predict(X.data, model, X.shape, dec_values.data)
|
|
* if rv < 0:
|
|
* raise MemoryError("We've run out of memory") # <<<<<<<<<<<<<<
|
|
* finally:
|
|
* free_model(model)
|
|
*/
|
|
__pyx_t_5 = __Pyx_PyObject_Call(__pyx_builtin_MemoryError, __pyx_tuple__14, NULL); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 328; __pyx_clineno = __LINE__; goto __pyx_L4_error;}
|
|
__Pyx_GOTREF(__pyx_t_5);
|
|
__Pyx_Raise(__pyx_t_5, 0, 0, 0);
|
|
__Pyx_DECREF(__pyx_t_5); __pyx_t_5 = 0;
|
|
{__pyx_filename = __pyx_f[0]; __pyx_lineno = 328; __pyx_clineno = __LINE__; goto __pyx_L4_error;}
|
|
}
|
|
}
|
|
|
|
/* "sklearn/svm/libsvm.pyx":330
|
|
* raise MemoryError("We've run out of memory")
|
|
* finally:
|
|
* free_model(model) # <<<<<<<<<<<<<<
|
|
*
|
|
* return dec_values
|
|
*/
|
|
/*finally:*/ {
|
|
/*normal exit:*/{
|
|
free_model(__pyx_v_model);
|
|
goto __pyx_L5;
|
|
}
|
|
/*exception exit:*/{
|
|
__pyx_L4_error:;
|
|
__pyx_t_11 = 0; __pyx_t_10 = 0; __pyx_t_9 = 0; __pyx_t_15 = 0; __pyx_t_16 = 0; __pyx_t_17 = 0;
|
|
__Pyx_XDECREF(__pyx_t_4); __pyx_t_4 = 0;
|
|
__Pyx_XDECREF(__pyx_t_2); __pyx_t_2 = 0;
|
|
__Pyx_XDECREF(__pyx_t_1); __pyx_t_1 = 0;
|
|
__Pyx_XDECREF(__pyx_t_3); __pyx_t_3 = 0;
|
|
__Pyx_XDECREF(__pyx_t_5); __pyx_t_5 = 0;
|
|
if (PY_MAJOR_VERSION >= 3) __Pyx_ExceptionSwap(&__pyx_t_15, &__pyx_t_16, &__pyx_t_17);
|
|
if ((PY_MAJOR_VERSION < 3) || unlikely(__Pyx_GetException(&__pyx_t_11, &__pyx_t_10, &__pyx_t_9) < 0)) __Pyx_ErrFetch(&__pyx_t_11, &__pyx_t_10, &__pyx_t_9);
|
|
__Pyx_XGOTREF(__pyx_t_11);
|
|
__Pyx_XGOTREF(__pyx_t_10);
|
|
__Pyx_XGOTREF(__pyx_t_9);
|
|
__Pyx_XGOTREF(__pyx_t_15);
|
|
__Pyx_XGOTREF(__pyx_t_16);
|
|
__Pyx_XGOTREF(__pyx_t_17);
|
|
__pyx_t_8 = __pyx_lineno; __pyx_t_13 = __pyx_clineno; __pyx_t_14 = __pyx_filename;
|
|
{
|
|
free_model(__pyx_v_model);
|
|
}
|
|
if (PY_MAJOR_VERSION >= 3) {
|
|
__Pyx_XGIVEREF(__pyx_t_15);
|
|
__Pyx_XGIVEREF(__pyx_t_16);
|
|
__Pyx_XGIVEREF(__pyx_t_17);
|
|
__Pyx_ExceptionReset(__pyx_t_15, __pyx_t_16, __pyx_t_17);
|
|
}
|
|
__Pyx_XGIVEREF(__pyx_t_11);
|
|
__Pyx_XGIVEREF(__pyx_t_10);
|
|
__Pyx_XGIVEREF(__pyx_t_9);
|
|
__Pyx_ErrRestore(__pyx_t_11, __pyx_t_10, __pyx_t_9);
|
|
__pyx_t_11 = 0; __pyx_t_10 = 0; __pyx_t_9 = 0; __pyx_t_15 = 0; __pyx_t_16 = 0; __pyx_t_17 = 0;
|
|
__pyx_lineno = __pyx_t_8; __pyx_clineno = __pyx_t_13; __pyx_filename = __pyx_t_14;
|
|
goto __pyx_L1_error;
|
|
}
|
|
__pyx_L5:;
|
|
}
|
|
|
|
/* "sklearn/svm/libsvm.pyx":332
|
|
* free_model(model)
|
|
*
|
|
* return dec_values # <<<<<<<<<<<<<<
|
|
*
|
|
*
|
|
*/
|
|
__Pyx_XDECREF(__pyx_r);
|
|
__Pyx_INCREF(((PyObject *)__pyx_v_dec_values));
|
|
__pyx_r = ((PyObject *)__pyx_v_dec_values);
|
|
goto __pyx_L0;
|
|
|
|
/* "sklearn/svm/libsvm.pyx":270
|
|
*
|
|
*
|
|
* def predict(np.ndarray[np.float64_t, ndim=2, mode='c'] X, # <<<<<<<<<<<<<<
|
|
* np.ndarray[np.int32_t, ndim=1, mode='c'] support,
|
|
* np.ndarray[np.float64_t, ndim=2, mode='c'] SV,
|
|
*/
|
|
|
|
/* function exit code */
|
|
__pyx_L1_error:;
|
|
__Pyx_XDECREF(__pyx_t_1);
|
|
__Pyx_XDECREF(__pyx_t_2);
|
|
__Pyx_XDECREF(__pyx_t_3);
|
|
__Pyx_XDECREF(__pyx_t_4);
|
|
__Pyx_XDECREF(__pyx_t_5);
|
|
{ PyObject *__pyx_type, *__pyx_value, *__pyx_tb;
|
|
__Pyx_ErrFetch(&__pyx_type, &__pyx_value, &__pyx_tb);
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_SV.rcbuffer->pybuffer);
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_X.rcbuffer->pybuffer);
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_class_weight.rcbuffer->pybuffer);
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_class_weight_label.rcbuffer->pybuffer);
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_dec_values.rcbuffer->pybuffer);
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_intercept.rcbuffer->pybuffer);
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_nSV.rcbuffer->pybuffer);
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_probA.rcbuffer->pybuffer);
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_probB.rcbuffer->pybuffer);
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_sample_weight.rcbuffer->pybuffer);
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_support.rcbuffer->pybuffer);
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_sv_coef.rcbuffer->pybuffer);
|
|
__Pyx_ErrRestore(__pyx_type, __pyx_value, __pyx_tb);}
|
|
__Pyx_AddTraceback("sklearn.svm.libsvm.predict", __pyx_clineno, __pyx_lineno, __pyx_filename);
|
|
__pyx_r = NULL;
|
|
goto __pyx_L2;
|
|
__pyx_L0:;
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_SV.rcbuffer->pybuffer);
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_X.rcbuffer->pybuffer);
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_class_weight.rcbuffer->pybuffer);
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_class_weight_label.rcbuffer->pybuffer);
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_dec_values.rcbuffer->pybuffer);
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_intercept.rcbuffer->pybuffer);
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_nSV.rcbuffer->pybuffer);
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_probA.rcbuffer->pybuffer);
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_probB.rcbuffer->pybuffer);
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_sample_weight.rcbuffer->pybuffer);
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_support.rcbuffer->pybuffer);
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_sv_coef.rcbuffer->pybuffer);
|
|
__pyx_L2:;
|
|
__Pyx_XDECREF((PyObject *)__pyx_v_dec_values);
|
|
__Pyx_XDECREF((PyObject *)__pyx_v_class_weight_label);
|
|
__Pyx_XGIVEREF(__pyx_r);
|
|
__Pyx_RefNannyFinishContext();
|
|
return __pyx_r;
|
|
}
|
|
|
|
/* "sklearn/svm/libsvm.pyx":335
|
|
*
|
|
*
|
|
* def predict_proba( # <<<<<<<<<<<<<<
|
|
* np.ndarray[np.float64_t, ndim=2, mode='c'] X,
|
|
* np.ndarray[np.int32_t, ndim=1, mode='c'] support,
|
|
*/
|
|
|
|
/* Python wrapper */
|
|
static PyObject *__pyx_pw_7sklearn_3svm_6libsvm_5predict_proba(PyObject *__pyx_self, PyObject *__pyx_args, PyObject *__pyx_kwds); /*proto*/
|
|
static char __pyx_doc_7sklearn_3svm_6libsvm_4predict_proba[] = "\n Predict probabilities\n\n svm_model stores all parameters needed to predict a given value.\n\n For speed, all real work is done at the C level in function\n copy_predict (libsvm_helper.c).\n\n We have to reconstruct model and parameters to make sure we stay\n in sync with the python object.\n\n See sklearn.svm.predict for a complete list of parameters.\n\n Parameters\n ----------\n X: array-like, dtype=float\n kernel : {'linear', 'rbf', 'poly', 'sigmoid', 'precomputed'}\n\n Returns\n -------\n dec_values : array\n predicted values.\n ";
|
|
static PyMethodDef __pyx_mdef_7sklearn_3svm_6libsvm_5predict_proba = {__Pyx_NAMESTR("predict_proba"), (PyCFunction)__pyx_pw_7sklearn_3svm_6libsvm_5predict_proba, METH_VARARGS|METH_KEYWORDS, __Pyx_DOCSTR(__pyx_doc_7sklearn_3svm_6libsvm_4predict_proba)};
|
|
static PyObject *__pyx_pw_7sklearn_3svm_6libsvm_5predict_proba(PyObject *__pyx_self, PyObject *__pyx_args, PyObject *__pyx_kwds) {
|
|
PyArrayObject *__pyx_v_X = 0;
|
|
PyArrayObject *__pyx_v_support = 0;
|
|
PyArrayObject *__pyx_v_SV = 0;
|
|
PyArrayObject *__pyx_v_nSV = 0;
|
|
PyArrayObject *__pyx_v_sv_coef = 0;
|
|
PyArrayObject *__pyx_v_intercept = 0;
|
|
PyArrayObject *__pyx_v_probA = 0;
|
|
PyArrayObject *__pyx_v_probB = 0;
|
|
int __pyx_v_svm_type;
|
|
PyObject *__pyx_v_kernel = 0;
|
|
int __pyx_v_degree;
|
|
double __pyx_v_gamma;
|
|
double __pyx_v_coef0;
|
|
PyArrayObject *__pyx_v_class_weight = 0;
|
|
CYTHON_UNUSED PyArrayObject *__pyx_v_sample_weight = 0;
|
|
double __pyx_v_cache_size;
|
|
int __pyx_lineno = 0;
|
|
const char *__pyx_filename = NULL;
|
|
int __pyx_clineno = 0;
|
|
PyObject *__pyx_r = 0;
|
|
__Pyx_RefNannyDeclarations
|
|
__Pyx_RefNannySetupContext("predict_proba (wrapper)", 0);
|
|
{
|
|
static PyObject **__pyx_pyargnames[] = {&__pyx_n_s_X,&__pyx_n_s_support,&__pyx_n_s_SV,&__pyx_n_s_nSV,&__pyx_n_s_sv_coef,&__pyx_n_s_intercept,&__pyx_n_s_probA,&__pyx_n_s_probB,&__pyx_n_s_svm_type,&__pyx_n_s_kernel,&__pyx_n_s_degree,&__pyx_n_s_gamma,&__pyx_n_s_coef0,&__pyx_n_s_class_weight,&__pyx_n_s_sample_weight,&__pyx_n_s_cache_size,0};
|
|
PyObject* values[16] = {0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0};
|
|
values[6] = (PyObject *)__pyx_k__15;
|
|
values[7] = (PyObject *)__pyx_k__16;
|
|
values[9] = ((PyObject*)__pyx_n_s_rbf);
|
|
values[13] = (PyObject *)__pyx_k__17;
|
|
values[14] = (PyObject *)__pyx_k__18;
|
|
if (unlikely(__pyx_kwds)) {
|
|
Py_ssize_t kw_args;
|
|
const Py_ssize_t pos_args = PyTuple_GET_SIZE(__pyx_args);
|
|
switch (pos_args) {
|
|
case 16: values[15] = PyTuple_GET_ITEM(__pyx_args, 15);
|
|
case 15: values[14] = PyTuple_GET_ITEM(__pyx_args, 14);
|
|
case 14: values[13] = PyTuple_GET_ITEM(__pyx_args, 13);
|
|
case 13: values[12] = PyTuple_GET_ITEM(__pyx_args, 12);
|
|
case 12: values[11] = PyTuple_GET_ITEM(__pyx_args, 11);
|
|
case 11: values[10] = PyTuple_GET_ITEM(__pyx_args, 10);
|
|
case 10: values[9] = PyTuple_GET_ITEM(__pyx_args, 9);
|
|
case 9: values[8] = PyTuple_GET_ITEM(__pyx_args, 8);
|
|
case 8: values[7] = PyTuple_GET_ITEM(__pyx_args, 7);
|
|
case 7: values[6] = PyTuple_GET_ITEM(__pyx_args, 6);
|
|
case 6: values[5] = PyTuple_GET_ITEM(__pyx_args, 5);
|
|
case 5: values[4] = PyTuple_GET_ITEM(__pyx_args, 4);
|
|
case 4: values[3] = PyTuple_GET_ITEM(__pyx_args, 3);
|
|
case 3: values[2] = PyTuple_GET_ITEM(__pyx_args, 2);
|
|
case 2: values[1] = PyTuple_GET_ITEM(__pyx_args, 1);
|
|
case 1: values[0] = PyTuple_GET_ITEM(__pyx_args, 0);
|
|
case 0: break;
|
|
default: goto __pyx_L5_argtuple_error;
|
|
}
|
|
kw_args = PyDict_Size(__pyx_kwds);
|
|
switch (pos_args) {
|
|
case 0:
|
|
if (likely((values[0] = PyDict_GetItem(__pyx_kwds, __pyx_n_s_X)) != 0)) kw_args--;
|
|
else goto __pyx_L5_argtuple_error;
|
|
case 1:
|
|
if (likely((values[1] = PyDict_GetItem(__pyx_kwds, __pyx_n_s_support)) != 0)) kw_args--;
|
|
else {
|
|
__Pyx_RaiseArgtupleInvalid("predict_proba", 0, 6, 16, 1); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 335; __pyx_clineno = __LINE__; goto __pyx_L3_error;}
|
|
}
|
|
case 2:
|
|
if (likely((values[2] = PyDict_GetItem(__pyx_kwds, __pyx_n_s_SV)) != 0)) kw_args--;
|
|
else {
|
|
__Pyx_RaiseArgtupleInvalid("predict_proba", 0, 6, 16, 2); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 335; __pyx_clineno = __LINE__; goto __pyx_L3_error;}
|
|
}
|
|
case 3:
|
|
if (likely((values[3] = PyDict_GetItem(__pyx_kwds, __pyx_n_s_nSV)) != 0)) kw_args--;
|
|
else {
|
|
__Pyx_RaiseArgtupleInvalid("predict_proba", 0, 6, 16, 3); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 335; __pyx_clineno = __LINE__; goto __pyx_L3_error;}
|
|
}
|
|
case 4:
|
|
if (likely((values[4] = PyDict_GetItem(__pyx_kwds, __pyx_n_s_sv_coef)) != 0)) kw_args--;
|
|
else {
|
|
__Pyx_RaiseArgtupleInvalid("predict_proba", 0, 6, 16, 4); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 335; __pyx_clineno = __LINE__; goto __pyx_L3_error;}
|
|
}
|
|
case 5:
|
|
if (likely((values[5] = PyDict_GetItem(__pyx_kwds, __pyx_n_s_intercept)) != 0)) kw_args--;
|
|
else {
|
|
__Pyx_RaiseArgtupleInvalid("predict_proba", 0, 6, 16, 5); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 335; __pyx_clineno = __LINE__; goto __pyx_L3_error;}
|
|
}
|
|
case 6:
|
|
if (kw_args > 0) {
|
|
PyObject* value = PyDict_GetItem(__pyx_kwds, __pyx_n_s_probA);
|
|
if (value) { values[6] = value; kw_args--; }
|
|
}
|
|
case 7:
|
|
if (kw_args > 0) {
|
|
PyObject* value = PyDict_GetItem(__pyx_kwds, __pyx_n_s_probB);
|
|
if (value) { values[7] = value; kw_args--; }
|
|
}
|
|
case 8:
|
|
if (kw_args > 0) {
|
|
PyObject* value = PyDict_GetItem(__pyx_kwds, __pyx_n_s_svm_type);
|
|
if (value) { values[8] = value; kw_args--; }
|
|
}
|
|
case 9:
|
|
if (kw_args > 0) {
|
|
PyObject* value = PyDict_GetItem(__pyx_kwds, __pyx_n_s_kernel);
|
|
if (value) { values[9] = value; kw_args--; }
|
|
}
|
|
case 10:
|
|
if (kw_args > 0) {
|
|
PyObject* value = PyDict_GetItem(__pyx_kwds, __pyx_n_s_degree);
|
|
if (value) { values[10] = value; kw_args--; }
|
|
}
|
|
case 11:
|
|
if (kw_args > 0) {
|
|
PyObject* value = PyDict_GetItem(__pyx_kwds, __pyx_n_s_gamma);
|
|
if (value) { values[11] = value; kw_args--; }
|
|
}
|
|
case 12:
|
|
if (kw_args > 0) {
|
|
PyObject* value = PyDict_GetItem(__pyx_kwds, __pyx_n_s_coef0);
|
|
if (value) { values[12] = value; kw_args--; }
|
|
}
|
|
case 13:
|
|
if (kw_args > 0) {
|
|
PyObject* value = PyDict_GetItem(__pyx_kwds, __pyx_n_s_class_weight);
|
|
if (value) { values[13] = value; kw_args--; }
|
|
}
|
|
case 14:
|
|
if (kw_args > 0) {
|
|
PyObject* value = PyDict_GetItem(__pyx_kwds, __pyx_n_s_sample_weight);
|
|
if (value) { values[14] = value; kw_args--; }
|
|
}
|
|
case 15:
|
|
if (kw_args > 0) {
|
|
PyObject* value = PyDict_GetItem(__pyx_kwds, __pyx_n_s_cache_size);
|
|
if (value) { values[15] = value; kw_args--; }
|
|
}
|
|
}
|
|
if (unlikely(kw_args > 0)) {
|
|
if (unlikely(__Pyx_ParseOptionalKeywords(__pyx_kwds, __pyx_pyargnames, 0, values, pos_args, "predict_proba") < 0)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 335; __pyx_clineno = __LINE__; goto __pyx_L3_error;}
|
|
}
|
|
} else {
|
|
switch (PyTuple_GET_SIZE(__pyx_args)) {
|
|
case 16: values[15] = PyTuple_GET_ITEM(__pyx_args, 15);
|
|
case 15: values[14] = PyTuple_GET_ITEM(__pyx_args, 14);
|
|
case 14: values[13] = PyTuple_GET_ITEM(__pyx_args, 13);
|
|
case 13: values[12] = PyTuple_GET_ITEM(__pyx_args, 12);
|
|
case 12: values[11] = PyTuple_GET_ITEM(__pyx_args, 11);
|
|
case 11: values[10] = PyTuple_GET_ITEM(__pyx_args, 10);
|
|
case 10: values[9] = PyTuple_GET_ITEM(__pyx_args, 9);
|
|
case 9: values[8] = PyTuple_GET_ITEM(__pyx_args, 8);
|
|
case 8: values[7] = PyTuple_GET_ITEM(__pyx_args, 7);
|
|
case 7: values[6] = PyTuple_GET_ITEM(__pyx_args, 6);
|
|
case 6: values[5] = PyTuple_GET_ITEM(__pyx_args, 5);
|
|
values[4] = PyTuple_GET_ITEM(__pyx_args, 4);
|
|
values[3] = PyTuple_GET_ITEM(__pyx_args, 3);
|
|
values[2] = PyTuple_GET_ITEM(__pyx_args, 2);
|
|
values[1] = PyTuple_GET_ITEM(__pyx_args, 1);
|
|
values[0] = PyTuple_GET_ITEM(__pyx_args, 0);
|
|
break;
|
|
default: goto __pyx_L5_argtuple_error;
|
|
}
|
|
}
|
|
__pyx_v_X = ((PyArrayObject *)values[0]);
|
|
__pyx_v_support = ((PyArrayObject *)values[1]);
|
|
__pyx_v_SV = ((PyArrayObject *)values[2]);
|
|
__pyx_v_nSV = ((PyArrayObject *)values[3]);
|
|
__pyx_v_sv_coef = ((PyArrayObject *)values[4]);
|
|
__pyx_v_intercept = ((PyArrayObject *)values[5]);
|
|
__pyx_v_probA = ((PyArrayObject *)values[6]);
|
|
__pyx_v_probB = ((PyArrayObject *)values[7]);
|
|
if (values[8]) {
|
|
__pyx_v_svm_type = __Pyx_PyInt_As_int(values[8]); if (unlikely((__pyx_v_svm_type == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 344; __pyx_clineno = __LINE__; goto __pyx_L3_error;}
|
|
} else {
|
|
__pyx_v_svm_type = ((int)0);
|
|
}
|
|
__pyx_v_kernel = ((PyObject*)values[9]);
|
|
if (values[10]) {
|
|
__pyx_v_degree = __Pyx_PyInt_As_int(values[10]); if (unlikely((__pyx_v_degree == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 344; __pyx_clineno = __LINE__; goto __pyx_L3_error;}
|
|
} else {
|
|
__pyx_v_degree = ((int)3);
|
|
}
|
|
if (values[11]) {
|
|
__pyx_v_gamma = __pyx_PyFloat_AsDouble(values[11]); if (unlikely((__pyx_v_gamma == (double)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 345; __pyx_clineno = __LINE__; goto __pyx_L3_error;}
|
|
} else {
|
|
__pyx_v_gamma = ((double)0.1);
|
|
}
|
|
if (values[12]) {
|
|
__pyx_v_coef0 = __pyx_PyFloat_AsDouble(values[12]); if (unlikely((__pyx_v_coef0 == (double)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 345; __pyx_clineno = __LINE__; goto __pyx_L3_error;}
|
|
} else {
|
|
__pyx_v_coef0 = ((double)0.);
|
|
}
|
|
__pyx_v_class_weight = ((PyArrayObject *)values[13]);
|
|
__pyx_v_sample_weight = ((PyArrayObject *)values[14]);
|
|
if (values[15]) {
|
|
__pyx_v_cache_size = __pyx_PyFloat_AsDouble(values[15]); if (unlikely((__pyx_v_cache_size == (double)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 350; __pyx_clineno = __LINE__; goto __pyx_L3_error;}
|
|
} else {
|
|
__pyx_v_cache_size = ((double)100.);
|
|
}
|
|
}
|
|
goto __pyx_L4_argument_unpacking_done;
|
|
__pyx_L5_argtuple_error:;
|
|
__Pyx_RaiseArgtupleInvalid("predict_proba", 0, 6, 16, PyTuple_GET_SIZE(__pyx_args)); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 335; __pyx_clineno = __LINE__; goto __pyx_L3_error;}
|
|
__pyx_L3_error:;
|
|
__Pyx_AddTraceback("sklearn.svm.libsvm.predict_proba", __pyx_clineno, __pyx_lineno, __pyx_filename);
|
|
__Pyx_RefNannyFinishContext();
|
|
return NULL;
|
|
__pyx_L4_argument_unpacking_done:;
|
|
if (unlikely(!__Pyx_ArgTypeTest(((PyObject *)__pyx_v_X), __pyx_ptype_5numpy_ndarray, 1, "X", 0))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 336; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
if (unlikely(!__Pyx_ArgTypeTest(((PyObject *)__pyx_v_support), __pyx_ptype_5numpy_ndarray, 1, "support", 0))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 337; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
if (unlikely(!__Pyx_ArgTypeTest(((PyObject *)__pyx_v_SV), __pyx_ptype_5numpy_ndarray, 1, "SV", 0))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 338; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
if (unlikely(!__Pyx_ArgTypeTest(((PyObject *)__pyx_v_nSV), __pyx_ptype_5numpy_ndarray, 1, "nSV", 0))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 339; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
if (unlikely(!__Pyx_ArgTypeTest(((PyObject *)__pyx_v_sv_coef), __pyx_ptype_5numpy_ndarray, 1, "sv_coef", 0))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 340; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
if (unlikely(!__Pyx_ArgTypeTest(((PyObject *)__pyx_v_intercept), __pyx_ptype_5numpy_ndarray, 1, "intercept", 0))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 341; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
if (unlikely(!__Pyx_ArgTypeTest(((PyObject *)__pyx_v_probA), __pyx_ptype_5numpy_ndarray, 1, "probA", 0))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 342; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
if (unlikely(!__Pyx_ArgTypeTest(((PyObject *)__pyx_v_probB), __pyx_ptype_5numpy_ndarray, 1, "probB", 0))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 343; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
if (unlikely(!__Pyx_ArgTypeTest(((PyObject *)__pyx_v_kernel), (&PyString_Type), 1, "kernel", 1))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 344; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
if (unlikely(!__Pyx_ArgTypeTest(((PyObject *)__pyx_v_class_weight), __pyx_ptype_5numpy_ndarray, 1, "class_weight", 0))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 346; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
if (unlikely(!__Pyx_ArgTypeTest(((PyObject *)__pyx_v_sample_weight), __pyx_ptype_5numpy_ndarray, 1, "sample_weight", 0))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 348; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__pyx_r = __pyx_pf_7sklearn_3svm_6libsvm_4predict_proba(__pyx_self, __pyx_v_X, __pyx_v_support, __pyx_v_SV, __pyx_v_nSV, __pyx_v_sv_coef, __pyx_v_intercept, __pyx_v_probA, __pyx_v_probB, __pyx_v_svm_type, __pyx_v_kernel, __pyx_v_degree, __pyx_v_gamma, __pyx_v_coef0, __pyx_v_class_weight, __pyx_v_sample_weight, __pyx_v_cache_size);
|
|
|
|
/* function exit code */
|
|
goto __pyx_L0;
|
|
__pyx_L1_error:;
|
|
__pyx_r = NULL;
|
|
__pyx_L0:;
|
|
__Pyx_RefNannyFinishContext();
|
|
return __pyx_r;
|
|
}
|
|
|
|
static PyObject *__pyx_pf_7sklearn_3svm_6libsvm_4predict_proba(CYTHON_UNUSED PyObject *__pyx_self, PyArrayObject *__pyx_v_X, PyArrayObject *__pyx_v_support, PyArrayObject *__pyx_v_SV, PyArrayObject *__pyx_v_nSV, PyArrayObject *__pyx_v_sv_coef, PyArrayObject *__pyx_v_intercept, PyArrayObject *__pyx_v_probA, PyArrayObject *__pyx_v_probB, int __pyx_v_svm_type, PyObject *__pyx_v_kernel, int __pyx_v_degree, double __pyx_v_gamma, double __pyx_v_coef0, PyArrayObject *__pyx_v_class_weight, CYTHON_UNUSED PyArrayObject *__pyx_v_sample_weight, double __pyx_v_cache_size) {
|
|
PyArrayObject *__pyx_v_dec_values = 0;
|
|
struct svm_parameter __pyx_v_param;
|
|
struct svm_model *__pyx_v_model;
|
|
PyArrayObject *__pyx_v_class_weight_label = 0;
|
|
int __pyx_v_rv;
|
|
npy_intp __pyx_v_n_class;
|
|
__Pyx_LocalBuf_ND __pyx_pybuffernd_SV;
|
|
__Pyx_Buffer __pyx_pybuffer_SV;
|
|
__Pyx_LocalBuf_ND __pyx_pybuffernd_X;
|
|
__Pyx_Buffer __pyx_pybuffer_X;
|
|
__Pyx_LocalBuf_ND __pyx_pybuffernd_class_weight;
|
|
__Pyx_Buffer __pyx_pybuffer_class_weight;
|
|
__Pyx_LocalBuf_ND __pyx_pybuffernd_class_weight_label;
|
|
__Pyx_Buffer __pyx_pybuffer_class_weight_label;
|
|
__Pyx_LocalBuf_ND __pyx_pybuffernd_dec_values;
|
|
__Pyx_Buffer __pyx_pybuffer_dec_values;
|
|
__Pyx_LocalBuf_ND __pyx_pybuffernd_intercept;
|
|
__Pyx_Buffer __pyx_pybuffer_intercept;
|
|
__Pyx_LocalBuf_ND __pyx_pybuffernd_nSV;
|
|
__Pyx_Buffer __pyx_pybuffer_nSV;
|
|
__Pyx_LocalBuf_ND __pyx_pybuffernd_probA;
|
|
__Pyx_Buffer __pyx_pybuffer_probA;
|
|
__Pyx_LocalBuf_ND __pyx_pybuffernd_probB;
|
|
__Pyx_Buffer __pyx_pybuffer_probB;
|
|
__Pyx_LocalBuf_ND __pyx_pybuffernd_sample_weight;
|
|
__Pyx_Buffer __pyx_pybuffer_sample_weight;
|
|
__Pyx_LocalBuf_ND __pyx_pybuffernd_support;
|
|
__Pyx_Buffer __pyx_pybuffer_support;
|
|
__Pyx_LocalBuf_ND __pyx_pybuffernd_sv_coef;
|
|
__Pyx_Buffer __pyx_pybuffer_sv_coef;
|
|
PyObject *__pyx_r = NULL;
|
|
__Pyx_RefNannyDeclarations
|
|
PyObject *__pyx_t_1 = NULL;
|
|
PyObject *__pyx_t_2 = NULL;
|
|
PyObject *__pyx_t_3 = NULL;
|
|
PyObject *__pyx_t_4 = NULL;
|
|
PyObject *__pyx_t_5 = NULL;
|
|
PyArrayObject *__pyx_t_6 = NULL;
|
|
PyArrayObject *__pyx_t_7 = NULL;
|
|
int __pyx_t_8;
|
|
PyObject *__pyx_t_9 = NULL;
|
|
PyObject *__pyx_t_10 = NULL;
|
|
PyObject *__pyx_t_11 = NULL;
|
|
int __pyx_t_12;
|
|
int __pyx_t_13;
|
|
char const *__pyx_t_14;
|
|
PyObject *__pyx_t_15 = NULL;
|
|
PyObject *__pyx_t_16 = NULL;
|
|
PyObject *__pyx_t_17 = NULL;
|
|
int __pyx_lineno = 0;
|
|
const char *__pyx_filename = NULL;
|
|
int __pyx_clineno = 0;
|
|
__Pyx_RefNannySetupContext("predict_proba", 0);
|
|
__pyx_pybuffer_dec_values.pybuffer.buf = NULL;
|
|
__pyx_pybuffer_dec_values.refcount = 0;
|
|
__pyx_pybuffernd_dec_values.data = NULL;
|
|
__pyx_pybuffernd_dec_values.rcbuffer = &__pyx_pybuffer_dec_values;
|
|
__pyx_pybuffer_class_weight_label.pybuffer.buf = NULL;
|
|
__pyx_pybuffer_class_weight_label.refcount = 0;
|
|
__pyx_pybuffernd_class_weight_label.data = NULL;
|
|
__pyx_pybuffernd_class_weight_label.rcbuffer = &__pyx_pybuffer_class_weight_label;
|
|
__pyx_pybuffer_X.pybuffer.buf = NULL;
|
|
__pyx_pybuffer_X.refcount = 0;
|
|
__pyx_pybuffernd_X.data = NULL;
|
|
__pyx_pybuffernd_X.rcbuffer = &__pyx_pybuffer_X;
|
|
__pyx_pybuffer_support.pybuffer.buf = NULL;
|
|
__pyx_pybuffer_support.refcount = 0;
|
|
__pyx_pybuffernd_support.data = NULL;
|
|
__pyx_pybuffernd_support.rcbuffer = &__pyx_pybuffer_support;
|
|
__pyx_pybuffer_SV.pybuffer.buf = NULL;
|
|
__pyx_pybuffer_SV.refcount = 0;
|
|
__pyx_pybuffernd_SV.data = NULL;
|
|
__pyx_pybuffernd_SV.rcbuffer = &__pyx_pybuffer_SV;
|
|
__pyx_pybuffer_nSV.pybuffer.buf = NULL;
|
|
__pyx_pybuffer_nSV.refcount = 0;
|
|
__pyx_pybuffernd_nSV.data = NULL;
|
|
__pyx_pybuffernd_nSV.rcbuffer = &__pyx_pybuffer_nSV;
|
|
__pyx_pybuffer_sv_coef.pybuffer.buf = NULL;
|
|
__pyx_pybuffer_sv_coef.refcount = 0;
|
|
__pyx_pybuffernd_sv_coef.data = NULL;
|
|
__pyx_pybuffernd_sv_coef.rcbuffer = &__pyx_pybuffer_sv_coef;
|
|
__pyx_pybuffer_intercept.pybuffer.buf = NULL;
|
|
__pyx_pybuffer_intercept.refcount = 0;
|
|
__pyx_pybuffernd_intercept.data = NULL;
|
|
__pyx_pybuffernd_intercept.rcbuffer = &__pyx_pybuffer_intercept;
|
|
__pyx_pybuffer_probA.pybuffer.buf = NULL;
|
|
__pyx_pybuffer_probA.refcount = 0;
|
|
__pyx_pybuffernd_probA.data = NULL;
|
|
__pyx_pybuffernd_probA.rcbuffer = &__pyx_pybuffer_probA;
|
|
__pyx_pybuffer_probB.pybuffer.buf = NULL;
|
|
__pyx_pybuffer_probB.refcount = 0;
|
|
__pyx_pybuffernd_probB.data = NULL;
|
|
__pyx_pybuffernd_probB.rcbuffer = &__pyx_pybuffer_probB;
|
|
__pyx_pybuffer_class_weight.pybuffer.buf = NULL;
|
|
__pyx_pybuffer_class_weight.refcount = 0;
|
|
__pyx_pybuffernd_class_weight.data = NULL;
|
|
__pyx_pybuffernd_class_weight.rcbuffer = &__pyx_pybuffer_class_weight;
|
|
__pyx_pybuffer_sample_weight.pybuffer.buf = NULL;
|
|
__pyx_pybuffer_sample_weight.refcount = 0;
|
|
__pyx_pybuffernd_sample_weight.data = NULL;
|
|
__pyx_pybuffernd_sample_weight.rcbuffer = &__pyx_pybuffer_sample_weight;
|
|
{
|
|
__Pyx_BufFmt_StackElem __pyx_stack[1];
|
|
if (unlikely(__Pyx_GetBufferAndValidate(&__pyx_pybuffernd_X.rcbuffer->pybuffer, (PyObject*)__pyx_v_X, &__Pyx_TypeInfo_nn___pyx_t_5numpy_float64_t, PyBUF_FORMAT| PyBUF_C_CONTIGUOUS, 2, 0, __pyx_stack) == -1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 335; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
}
|
|
__pyx_pybuffernd_X.diminfo[0].strides = __pyx_pybuffernd_X.rcbuffer->pybuffer.strides[0]; __pyx_pybuffernd_X.diminfo[0].shape = __pyx_pybuffernd_X.rcbuffer->pybuffer.shape[0]; __pyx_pybuffernd_X.diminfo[1].strides = __pyx_pybuffernd_X.rcbuffer->pybuffer.strides[1]; __pyx_pybuffernd_X.diminfo[1].shape = __pyx_pybuffernd_X.rcbuffer->pybuffer.shape[1];
|
|
{
|
|
__Pyx_BufFmt_StackElem __pyx_stack[1];
|
|
if (unlikely(__Pyx_GetBufferAndValidate(&__pyx_pybuffernd_support.rcbuffer->pybuffer, (PyObject*)__pyx_v_support, &__Pyx_TypeInfo_nn___pyx_t_5numpy_int32_t, PyBUF_FORMAT| PyBUF_C_CONTIGUOUS, 1, 0, __pyx_stack) == -1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 335; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
}
|
|
__pyx_pybuffernd_support.diminfo[0].strides = __pyx_pybuffernd_support.rcbuffer->pybuffer.strides[0]; __pyx_pybuffernd_support.diminfo[0].shape = __pyx_pybuffernd_support.rcbuffer->pybuffer.shape[0];
|
|
{
|
|
__Pyx_BufFmt_StackElem __pyx_stack[1];
|
|
if (unlikely(__Pyx_GetBufferAndValidate(&__pyx_pybuffernd_SV.rcbuffer->pybuffer, (PyObject*)__pyx_v_SV, &__Pyx_TypeInfo_nn___pyx_t_5numpy_float64_t, PyBUF_FORMAT| PyBUF_C_CONTIGUOUS, 2, 0, __pyx_stack) == -1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 335; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
}
|
|
__pyx_pybuffernd_SV.diminfo[0].strides = __pyx_pybuffernd_SV.rcbuffer->pybuffer.strides[0]; __pyx_pybuffernd_SV.diminfo[0].shape = __pyx_pybuffernd_SV.rcbuffer->pybuffer.shape[0]; __pyx_pybuffernd_SV.diminfo[1].strides = __pyx_pybuffernd_SV.rcbuffer->pybuffer.strides[1]; __pyx_pybuffernd_SV.diminfo[1].shape = __pyx_pybuffernd_SV.rcbuffer->pybuffer.shape[1];
|
|
{
|
|
__Pyx_BufFmt_StackElem __pyx_stack[1];
|
|
if (unlikely(__Pyx_GetBufferAndValidate(&__pyx_pybuffernd_nSV.rcbuffer->pybuffer, (PyObject*)__pyx_v_nSV, &__Pyx_TypeInfo_nn___pyx_t_5numpy_int32_t, PyBUF_FORMAT| PyBUF_C_CONTIGUOUS, 1, 0, __pyx_stack) == -1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 335; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
}
|
|
__pyx_pybuffernd_nSV.diminfo[0].strides = __pyx_pybuffernd_nSV.rcbuffer->pybuffer.strides[0]; __pyx_pybuffernd_nSV.diminfo[0].shape = __pyx_pybuffernd_nSV.rcbuffer->pybuffer.shape[0];
|
|
{
|
|
__Pyx_BufFmt_StackElem __pyx_stack[1];
|
|
if (unlikely(__Pyx_GetBufferAndValidate(&__pyx_pybuffernd_sv_coef.rcbuffer->pybuffer, (PyObject*)__pyx_v_sv_coef, &__Pyx_TypeInfo_nn___pyx_t_5numpy_float64_t, PyBUF_FORMAT| PyBUF_C_CONTIGUOUS, 2, 0, __pyx_stack) == -1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 335; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
}
|
|
__pyx_pybuffernd_sv_coef.diminfo[0].strides = __pyx_pybuffernd_sv_coef.rcbuffer->pybuffer.strides[0]; __pyx_pybuffernd_sv_coef.diminfo[0].shape = __pyx_pybuffernd_sv_coef.rcbuffer->pybuffer.shape[0]; __pyx_pybuffernd_sv_coef.diminfo[1].strides = __pyx_pybuffernd_sv_coef.rcbuffer->pybuffer.strides[1]; __pyx_pybuffernd_sv_coef.diminfo[1].shape = __pyx_pybuffernd_sv_coef.rcbuffer->pybuffer.shape[1];
|
|
{
|
|
__Pyx_BufFmt_StackElem __pyx_stack[1];
|
|
if (unlikely(__Pyx_GetBufferAndValidate(&__pyx_pybuffernd_intercept.rcbuffer->pybuffer, (PyObject*)__pyx_v_intercept, &__Pyx_TypeInfo_nn___pyx_t_5numpy_float64_t, PyBUF_FORMAT| PyBUF_C_CONTIGUOUS, 1, 0, __pyx_stack) == -1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 335; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
}
|
|
__pyx_pybuffernd_intercept.diminfo[0].strides = __pyx_pybuffernd_intercept.rcbuffer->pybuffer.strides[0]; __pyx_pybuffernd_intercept.diminfo[0].shape = __pyx_pybuffernd_intercept.rcbuffer->pybuffer.shape[0];
|
|
{
|
|
__Pyx_BufFmt_StackElem __pyx_stack[1];
|
|
if (unlikely(__Pyx_GetBufferAndValidate(&__pyx_pybuffernd_probA.rcbuffer->pybuffer, (PyObject*)__pyx_v_probA, &__Pyx_TypeInfo_nn___pyx_t_5numpy_float64_t, PyBUF_FORMAT| PyBUF_C_CONTIGUOUS, 1, 0, __pyx_stack) == -1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 335; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
}
|
|
__pyx_pybuffernd_probA.diminfo[0].strides = __pyx_pybuffernd_probA.rcbuffer->pybuffer.strides[0]; __pyx_pybuffernd_probA.diminfo[0].shape = __pyx_pybuffernd_probA.rcbuffer->pybuffer.shape[0];
|
|
{
|
|
__Pyx_BufFmt_StackElem __pyx_stack[1];
|
|
if (unlikely(__Pyx_GetBufferAndValidate(&__pyx_pybuffernd_probB.rcbuffer->pybuffer, (PyObject*)__pyx_v_probB, &__Pyx_TypeInfo_nn___pyx_t_5numpy_float64_t, PyBUF_FORMAT| PyBUF_C_CONTIGUOUS, 1, 0, __pyx_stack) == -1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 335; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
}
|
|
__pyx_pybuffernd_probB.diminfo[0].strides = __pyx_pybuffernd_probB.rcbuffer->pybuffer.strides[0]; __pyx_pybuffernd_probB.diminfo[0].shape = __pyx_pybuffernd_probB.rcbuffer->pybuffer.shape[0];
|
|
{
|
|
__Pyx_BufFmt_StackElem __pyx_stack[1];
|
|
if (unlikely(__Pyx_GetBufferAndValidate(&__pyx_pybuffernd_class_weight.rcbuffer->pybuffer, (PyObject*)__pyx_v_class_weight, &__Pyx_TypeInfo_nn___pyx_t_5numpy_float64_t, PyBUF_FORMAT| PyBUF_C_CONTIGUOUS, 1, 0, __pyx_stack) == -1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 335; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
}
|
|
__pyx_pybuffernd_class_weight.diminfo[0].strides = __pyx_pybuffernd_class_weight.rcbuffer->pybuffer.strides[0]; __pyx_pybuffernd_class_weight.diminfo[0].shape = __pyx_pybuffernd_class_weight.rcbuffer->pybuffer.shape[0];
|
|
{
|
|
__Pyx_BufFmt_StackElem __pyx_stack[1];
|
|
if (unlikely(__Pyx_GetBufferAndValidate(&__pyx_pybuffernd_sample_weight.rcbuffer->pybuffer, (PyObject*)__pyx_v_sample_weight, &__Pyx_TypeInfo_nn___pyx_t_5numpy_float64_t, PyBUF_FORMAT| PyBUF_C_CONTIGUOUS, 1, 0, __pyx_stack) == -1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 335; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
}
|
|
__pyx_pybuffernd_sample_weight.diminfo[0].strides = __pyx_pybuffernd_sample_weight.rcbuffer->pybuffer.strides[0]; __pyx_pybuffernd_sample_weight.diminfo[0].shape = __pyx_pybuffernd_sample_weight.rcbuffer->pybuffer.shape[0];
|
|
|
|
/* "sklearn/svm/libsvm.pyx":378
|
|
* cdef svm_model *model
|
|
* cdef np.ndarray[np.int32_t, ndim=1, mode='c'] \
|
|
* class_weight_label = np.arange(class_weight.shape[0], dtype=np.int32) # <<<<<<<<<<<<<<
|
|
* cdef int rv
|
|
*
|
|
*/
|
|
__pyx_t_1 = __Pyx_GetModuleGlobalName(__pyx_n_s_np); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 378; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_1);
|
|
__pyx_t_2 = __Pyx_PyObject_GetAttrStr(__pyx_t_1, __pyx_n_s_arange); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 378; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_2);
|
|
__Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0;
|
|
__pyx_t_1 = __Pyx_PyInt_From_Py_intptr_t((__pyx_v_class_weight->dimensions[0])); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 378; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_1);
|
|
__pyx_t_3 = PyTuple_New(1); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 378; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_3);
|
|
PyTuple_SET_ITEM(__pyx_t_3, 0, __pyx_t_1);
|
|
__Pyx_GIVEREF(__pyx_t_1);
|
|
__pyx_t_1 = 0;
|
|
__pyx_t_1 = PyDict_New(); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 378; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_1);
|
|
__pyx_t_4 = __Pyx_GetModuleGlobalName(__pyx_n_s_np); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 378; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_4);
|
|
__pyx_t_5 = __Pyx_PyObject_GetAttrStr(__pyx_t_4, __pyx_n_s_int32); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 378; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_5);
|
|
__Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0;
|
|
if (PyDict_SetItem(__pyx_t_1, __pyx_n_s_dtype, __pyx_t_5) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 378; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_DECREF(__pyx_t_5); __pyx_t_5 = 0;
|
|
__pyx_t_5 = __Pyx_PyObject_Call(__pyx_t_2, __pyx_t_3, __pyx_t_1); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 378; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_5);
|
|
__Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0;
|
|
__Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0;
|
|
__Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0;
|
|
if (!(likely(((__pyx_t_5) == Py_None) || likely(__Pyx_TypeTest(__pyx_t_5, __pyx_ptype_5numpy_ndarray))))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 378; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__pyx_t_6 = ((PyArrayObject *)__pyx_t_5);
|
|
{
|
|
__Pyx_BufFmt_StackElem __pyx_stack[1];
|
|
if (unlikely(__Pyx_GetBufferAndValidate(&__pyx_pybuffernd_class_weight_label.rcbuffer->pybuffer, (PyObject*)__pyx_t_6, &__Pyx_TypeInfo_nn___pyx_t_5numpy_int32_t, PyBUF_FORMAT| PyBUF_C_CONTIGUOUS, 1, 0, __pyx_stack) == -1)) {
|
|
__pyx_v_class_weight_label = ((PyArrayObject *)Py_None); __Pyx_INCREF(Py_None); __pyx_pybuffernd_class_weight_label.rcbuffer->pybuffer.buf = NULL;
|
|
{__pyx_filename = __pyx_f[0]; __pyx_lineno = 377; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
} else {__pyx_pybuffernd_class_weight_label.diminfo[0].strides = __pyx_pybuffernd_class_weight_label.rcbuffer->pybuffer.strides[0]; __pyx_pybuffernd_class_weight_label.diminfo[0].shape = __pyx_pybuffernd_class_weight_label.rcbuffer->pybuffer.shape[0];
|
|
}
|
|
}
|
|
__pyx_t_6 = 0;
|
|
__pyx_v_class_weight_label = ((PyArrayObject *)__pyx_t_5);
|
|
__pyx_t_5 = 0;
|
|
|
|
/* "sklearn/svm/libsvm.pyx":381
|
|
* cdef int rv
|
|
*
|
|
* set_predict_params(¶m, svm_type, kernel, degree, gamma, coef0, # <<<<<<<<<<<<<<
|
|
* cache_size, 1, <int>class_weight.shape[0],
|
|
* class_weight_label.data, class_weight.data)
|
|
*/
|
|
__pyx_f_7sklearn_3svm_6libsvm_set_predict_params((&__pyx_v_param), __pyx_v_svm_type, __pyx_v_kernel, __pyx_v_degree, __pyx_v_gamma, __pyx_v_coef0, __pyx_v_cache_size, 1, ((int)(__pyx_v_class_weight->dimensions[0])), __pyx_v_class_weight_label->data, __pyx_v_class_weight->data); if (unlikely(PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 381; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
|
|
/* "sklearn/svm/libsvm.pyx":384
|
|
* cache_size, 1, <int>class_weight.shape[0],
|
|
* class_weight_label.data, class_weight.data)
|
|
* model = set_model(¶m, <int> nSV.shape[0], SV.data, SV.shape, # <<<<<<<<<<<<<<
|
|
* support.data, support.shape, sv_coef.strides,
|
|
* sv_coef.data, intercept.data, nSV.data,
|
|
*/
|
|
__pyx_v_model = set_model((&__pyx_v_param), ((int)(__pyx_v_nSV->dimensions[0])), __pyx_v_SV->data, __pyx_v_SV->dimensions, __pyx_v_support->data, __pyx_v_support->dimensions, __pyx_v_sv_coef->strides, __pyx_v_sv_coef->data, __pyx_v_intercept->data, __pyx_v_nSV->data, __pyx_v_probA->data, __pyx_v_probB->data);
|
|
|
|
/* "sklearn/svm/libsvm.pyx":389
|
|
* probA.data, probB.data)
|
|
*
|
|
* cdef np.npy_intp n_class = get_nr(model) # <<<<<<<<<<<<<<
|
|
* try:
|
|
* dec_values = np.empty((X.shape[0], n_class), dtype=np.float64)
|
|
*/
|
|
__pyx_v_n_class = get_nr(__pyx_v_model);
|
|
|
|
/* "sklearn/svm/libsvm.pyx":390
|
|
*
|
|
* cdef np.npy_intp n_class = get_nr(model)
|
|
* try: # <<<<<<<<<<<<<<
|
|
* dec_values = np.empty((X.shape[0], n_class), dtype=np.float64)
|
|
* with nogil:
|
|
*/
|
|
/*try:*/ {
|
|
|
|
/* "sklearn/svm/libsvm.pyx":391
|
|
* cdef np.npy_intp n_class = get_nr(model)
|
|
* try:
|
|
* dec_values = np.empty((X.shape[0], n_class), dtype=np.float64) # <<<<<<<<<<<<<<
|
|
* with nogil:
|
|
* rv = copy_predict_proba(X.data, model, X.shape, dec_values.data)
|
|
*/
|
|
__pyx_t_5 = __Pyx_GetModuleGlobalName(__pyx_n_s_np); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 391; __pyx_clineno = __LINE__; goto __pyx_L4_error;}
|
|
__Pyx_GOTREF(__pyx_t_5);
|
|
__pyx_t_1 = __Pyx_PyObject_GetAttrStr(__pyx_t_5, __pyx_n_s_empty); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 391; __pyx_clineno = __LINE__; goto __pyx_L4_error;}
|
|
__Pyx_GOTREF(__pyx_t_1);
|
|
__Pyx_DECREF(__pyx_t_5); __pyx_t_5 = 0;
|
|
__pyx_t_5 = __Pyx_PyInt_From_Py_intptr_t((__pyx_v_X->dimensions[0])); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 391; __pyx_clineno = __LINE__; goto __pyx_L4_error;}
|
|
__Pyx_GOTREF(__pyx_t_5);
|
|
__pyx_t_3 = __Pyx_PyInt_From_Py_intptr_t(__pyx_v_n_class); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 391; __pyx_clineno = __LINE__; goto __pyx_L4_error;}
|
|
__Pyx_GOTREF(__pyx_t_3);
|
|
__pyx_t_2 = PyTuple_New(2); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 391; __pyx_clineno = __LINE__; goto __pyx_L4_error;}
|
|
__Pyx_GOTREF(__pyx_t_2);
|
|
PyTuple_SET_ITEM(__pyx_t_2, 0, __pyx_t_5);
|
|
__Pyx_GIVEREF(__pyx_t_5);
|
|
PyTuple_SET_ITEM(__pyx_t_2, 1, __pyx_t_3);
|
|
__Pyx_GIVEREF(__pyx_t_3);
|
|
__pyx_t_5 = 0;
|
|
__pyx_t_3 = 0;
|
|
__pyx_t_3 = PyTuple_New(1); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 391; __pyx_clineno = __LINE__; goto __pyx_L4_error;}
|
|
__Pyx_GOTREF(__pyx_t_3);
|
|
PyTuple_SET_ITEM(__pyx_t_3, 0, __pyx_t_2);
|
|
__Pyx_GIVEREF(__pyx_t_2);
|
|
__pyx_t_2 = 0;
|
|
__pyx_t_2 = PyDict_New(); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 391; __pyx_clineno = __LINE__; goto __pyx_L4_error;}
|
|
__Pyx_GOTREF(__pyx_t_2);
|
|
__pyx_t_5 = __Pyx_GetModuleGlobalName(__pyx_n_s_np); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 391; __pyx_clineno = __LINE__; goto __pyx_L4_error;}
|
|
__Pyx_GOTREF(__pyx_t_5);
|
|
__pyx_t_4 = __Pyx_PyObject_GetAttrStr(__pyx_t_5, __pyx_n_s_float64); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 391; __pyx_clineno = __LINE__; goto __pyx_L4_error;}
|
|
__Pyx_GOTREF(__pyx_t_4);
|
|
__Pyx_DECREF(__pyx_t_5); __pyx_t_5 = 0;
|
|
if (PyDict_SetItem(__pyx_t_2, __pyx_n_s_dtype, __pyx_t_4) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 391; __pyx_clineno = __LINE__; goto __pyx_L4_error;}
|
|
__Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0;
|
|
__pyx_t_4 = __Pyx_PyObject_Call(__pyx_t_1, __pyx_t_3, __pyx_t_2); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 391; __pyx_clineno = __LINE__; goto __pyx_L4_error;}
|
|
__Pyx_GOTREF(__pyx_t_4);
|
|
__Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0;
|
|
__Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0;
|
|
__Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0;
|
|
if (!(likely(((__pyx_t_4) == Py_None) || likely(__Pyx_TypeTest(__pyx_t_4, __pyx_ptype_5numpy_ndarray))))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 391; __pyx_clineno = __LINE__; goto __pyx_L4_error;}
|
|
__pyx_t_7 = ((PyArrayObject *)__pyx_t_4);
|
|
{
|
|
__Pyx_BufFmt_StackElem __pyx_stack[1];
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_dec_values.rcbuffer->pybuffer);
|
|
__pyx_t_8 = __Pyx_GetBufferAndValidate(&__pyx_pybuffernd_dec_values.rcbuffer->pybuffer, (PyObject*)__pyx_t_7, &__Pyx_TypeInfo_nn___pyx_t_5numpy_float64_t, PyBUF_FORMAT| PyBUF_C_CONTIGUOUS, 2, 0, __pyx_stack);
|
|
if (unlikely(__pyx_t_8 < 0)) {
|
|
PyErr_Fetch(&__pyx_t_9, &__pyx_t_10, &__pyx_t_11);
|
|
if (unlikely(__Pyx_GetBufferAndValidate(&__pyx_pybuffernd_dec_values.rcbuffer->pybuffer, (PyObject*)__pyx_v_dec_values, &__Pyx_TypeInfo_nn___pyx_t_5numpy_float64_t, PyBUF_FORMAT| PyBUF_C_CONTIGUOUS, 2, 0, __pyx_stack) == -1)) {
|
|
Py_XDECREF(__pyx_t_9); Py_XDECREF(__pyx_t_10); Py_XDECREF(__pyx_t_11);
|
|
__Pyx_RaiseBufferFallbackError();
|
|
} else {
|
|
PyErr_Restore(__pyx_t_9, __pyx_t_10, __pyx_t_11);
|
|
}
|
|
}
|
|
__pyx_pybuffernd_dec_values.diminfo[0].strides = __pyx_pybuffernd_dec_values.rcbuffer->pybuffer.strides[0]; __pyx_pybuffernd_dec_values.diminfo[0].shape = __pyx_pybuffernd_dec_values.rcbuffer->pybuffer.shape[0]; __pyx_pybuffernd_dec_values.diminfo[1].strides = __pyx_pybuffernd_dec_values.rcbuffer->pybuffer.strides[1]; __pyx_pybuffernd_dec_values.diminfo[1].shape = __pyx_pybuffernd_dec_values.rcbuffer->pybuffer.shape[1];
|
|
if (unlikely(__pyx_t_8 < 0)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 391; __pyx_clineno = __LINE__; goto __pyx_L4_error;}
|
|
}
|
|
__pyx_t_7 = 0;
|
|
__pyx_v_dec_values = ((PyArrayObject *)__pyx_t_4);
|
|
__pyx_t_4 = 0;
|
|
|
|
/* "sklearn/svm/libsvm.pyx":392
|
|
* try:
|
|
* dec_values = np.empty((X.shape[0], n_class), dtype=np.float64)
|
|
* with nogil: # <<<<<<<<<<<<<<
|
|
* rv = copy_predict_proba(X.data, model, X.shape, dec_values.data)
|
|
* if rv < 0:
|
|
*/
|
|
{
|
|
#ifdef WITH_THREAD
|
|
PyThreadState *_save;
|
|
Py_UNBLOCK_THREADS
|
|
#endif
|
|
/*try:*/ {
|
|
|
|
/* "sklearn/svm/libsvm.pyx":393
|
|
* dec_values = np.empty((X.shape[0], n_class), dtype=np.float64)
|
|
* with nogil:
|
|
* rv = copy_predict_proba(X.data, model, X.shape, dec_values.data) # <<<<<<<<<<<<<<
|
|
* if rv < 0:
|
|
* raise MemoryError("We've run out of memory")
|
|
*/
|
|
__pyx_v_rv = copy_predict_proba(__pyx_v_X->data, __pyx_v_model, __pyx_v_X->dimensions, __pyx_v_dec_values->data);
|
|
}
|
|
|
|
/* "sklearn/svm/libsvm.pyx":392
|
|
* try:
|
|
* dec_values = np.empty((X.shape[0], n_class), dtype=np.float64)
|
|
* with nogil: # <<<<<<<<<<<<<<
|
|
* rv = copy_predict_proba(X.data, model, X.shape, dec_values.data)
|
|
* if rv < 0:
|
|
*/
|
|
/*finally:*/ {
|
|
/*normal exit:*/{
|
|
#ifdef WITH_THREAD
|
|
Py_BLOCK_THREADS
|
|
#endif
|
|
goto __pyx_L8;
|
|
}
|
|
__pyx_L8:;
|
|
}
|
|
}
|
|
|
|
/* "sklearn/svm/libsvm.pyx":394
|
|
* with nogil:
|
|
* rv = copy_predict_proba(X.data, model, X.shape, dec_values.data)
|
|
* if rv < 0: # <<<<<<<<<<<<<<
|
|
* raise MemoryError("We've run out of memory")
|
|
* finally:
|
|
*/
|
|
__pyx_t_12 = ((__pyx_v_rv < 0) != 0);
|
|
if (__pyx_t_12) {
|
|
|
|
/* "sklearn/svm/libsvm.pyx":395
|
|
* rv = copy_predict_proba(X.data, model, X.shape, dec_values.data)
|
|
* if rv < 0:
|
|
* raise MemoryError("We've run out of memory") # <<<<<<<<<<<<<<
|
|
* finally:
|
|
* free_model(model)
|
|
*/
|
|
__pyx_t_4 = __Pyx_PyObject_Call(__pyx_builtin_MemoryError, __pyx_tuple__19, NULL); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 395; __pyx_clineno = __LINE__; goto __pyx_L4_error;}
|
|
__Pyx_GOTREF(__pyx_t_4);
|
|
__Pyx_Raise(__pyx_t_4, 0, 0, 0);
|
|
__Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0;
|
|
{__pyx_filename = __pyx_f[0]; __pyx_lineno = 395; __pyx_clineno = __LINE__; goto __pyx_L4_error;}
|
|
}
|
|
}
|
|
|
|
/* "sklearn/svm/libsvm.pyx":397
|
|
* raise MemoryError("We've run out of memory")
|
|
* finally:
|
|
* free_model(model) # <<<<<<<<<<<<<<
|
|
*
|
|
* return dec_values
|
|
*/
|
|
/*finally:*/ {
|
|
/*normal exit:*/{
|
|
free_model(__pyx_v_model);
|
|
goto __pyx_L5;
|
|
}
|
|
/*exception exit:*/{
|
|
__pyx_L4_error:;
|
|
__pyx_t_11 = 0; __pyx_t_10 = 0; __pyx_t_9 = 0; __pyx_t_15 = 0; __pyx_t_16 = 0; __pyx_t_17 = 0;
|
|
__Pyx_XDECREF(__pyx_t_5); __pyx_t_5 = 0;
|
|
__Pyx_XDECREF(__pyx_t_1); __pyx_t_1 = 0;
|
|
__Pyx_XDECREF(__pyx_t_3); __pyx_t_3 = 0;
|
|
__Pyx_XDECREF(__pyx_t_2); __pyx_t_2 = 0;
|
|
__Pyx_XDECREF(__pyx_t_4); __pyx_t_4 = 0;
|
|
if (PY_MAJOR_VERSION >= 3) __Pyx_ExceptionSwap(&__pyx_t_15, &__pyx_t_16, &__pyx_t_17);
|
|
if ((PY_MAJOR_VERSION < 3) || unlikely(__Pyx_GetException(&__pyx_t_11, &__pyx_t_10, &__pyx_t_9) < 0)) __Pyx_ErrFetch(&__pyx_t_11, &__pyx_t_10, &__pyx_t_9);
|
|
__Pyx_XGOTREF(__pyx_t_11);
|
|
__Pyx_XGOTREF(__pyx_t_10);
|
|
__Pyx_XGOTREF(__pyx_t_9);
|
|
__Pyx_XGOTREF(__pyx_t_15);
|
|
__Pyx_XGOTREF(__pyx_t_16);
|
|
__Pyx_XGOTREF(__pyx_t_17);
|
|
__pyx_t_8 = __pyx_lineno; __pyx_t_13 = __pyx_clineno; __pyx_t_14 = __pyx_filename;
|
|
{
|
|
free_model(__pyx_v_model);
|
|
}
|
|
if (PY_MAJOR_VERSION >= 3) {
|
|
__Pyx_XGIVEREF(__pyx_t_15);
|
|
__Pyx_XGIVEREF(__pyx_t_16);
|
|
__Pyx_XGIVEREF(__pyx_t_17);
|
|
__Pyx_ExceptionReset(__pyx_t_15, __pyx_t_16, __pyx_t_17);
|
|
}
|
|
__Pyx_XGIVEREF(__pyx_t_11);
|
|
__Pyx_XGIVEREF(__pyx_t_10);
|
|
__Pyx_XGIVEREF(__pyx_t_9);
|
|
__Pyx_ErrRestore(__pyx_t_11, __pyx_t_10, __pyx_t_9);
|
|
__pyx_t_11 = 0; __pyx_t_10 = 0; __pyx_t_9 = 0; __pyx_t_15 = 0; __pyx_t_16 = 0; __pyx_t_17 = 0;
|
|
__pyx_lineno = __pyx_t_8; __pyx_clineno = __pyx_t_13; __pyx_filename = __pyx_t_14;
|
|
goto __pyx_L1_error;
|
|
}
|
|
__pyx_L5:;
|
|
}
|
|
|
|
/* "sklearn/svm/libsvm.pyx":399
|
|
* free_model(model)
|
|
*
|
|
* return dec_values # <<<<<<<<<<<<<<
|
|
*
|
|
*
|
|
*/
|
|
__Pyx_XDECREF(__pyx_r);
|
|
__Pyx_INCREF(((PyObject *)__pyx_v_dec_values));
|
|
__pyx_r = ((PyObject *)__pyx_v_dec_values);
|
|
goto __pyx_L0;
|
|
|
|
/* "sklearn/svm/libsvm.pyx":335
|
|
*
|
|
*
|
|
* def predict_proba( # <<<<<<<<<<<<<<
|
|
* np.ndarray[np.float64_t, ndim=2, mode='c'] X,
|
|
* np.ndarray[np.int32_t, ndim=1, mode='c'] support,
|
|
*/
|
|
|
|
/* function exit code */
|
|
__pyx_L1_error:;
|
|
__Pyx_XDECREF(__pyx_t_1);
|
|
__Pyx_XDECREF(__pyx_t_2);
|
|
__Pyx_XDECREF(__pyx_t_3);
|
|
__Pyx_XDECREF(__pyx_t_4);
|
|
__Pyx_XDECREF(__pyx_t_5);
|
|
{ PyObject *__pyx_type, *__pyx_value, *__pyx_tb;
|
|
__Pyx_ErrFetch(&__pyx_type, &__pyx_value, &__pyx_tb);
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_SV.rcbuffer->pybuffer);
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_X.rcbuffer->pybuffer);
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_class_weight.rcbuffer->pybuffer);
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_class_weight_label.rcbuffer->pybuffer);
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_dec_values.rcbuffer->pybuffer);
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_intercept.rcbuffer->pybuffer);
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_nSV.rcbuffer->pybuffer);
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_probA.rcbuffer->pybuffer);
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_probB.rcbuffer->pybuffer);
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_sample_weight.rcbuffer->pybuffer);
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_support.rcbuffer->pybuffer);
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_sv_coef.rcbuffer->pybuffer);
|
|
__Pyx_ErrRestore(__pyx_type, __pyx_value, __pyx_tb);}
|
|
__Pyx_AddTraceback("sklearn.svm.libsvm.predict_proba", __pyx_clineno, __pyx_lineno, __pyx_filename);
|
|
__pyx_r = NULL;
|
|
goto __pyx_L2;
|
|
__pyx_L0:;
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_SV.rcbuffer->pybuffer);
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_X.rcbuffer->pybuffer);
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_class_weight.rcbuffer->pybuffer);
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_class_weight_label.rcbuffer->pybuffer);
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_dec_values.rcbuffer->pybuffer);
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_intercept.rcbuffer->pybuffer);
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_nSV.rcbuffer->pybuffer);
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_probA.rcbuffer->pybuffer);
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_probB.rcbuffer->pybuffer);
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_sample_weight.rcbuffer->pybuffer);
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_support.rcbuffer->pybuffer);
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_sv_coef.rcbuffer->pybuffer);
|
|
__pyx_L2:;
|
|
__Pyx_XDECREF((PyObject *)__pyx_v_dec_values);
|
|
__Pyx_XDECREF((PyObject *)__pyx_v_class_weight_label);
|
|
__Pyx_XGIVEREF(__pyx_r);
|
|
__Pyx_RefNannyFinishContext();
|
|
return __pyx_r;
|
|
}
|
|
|
|
/* "sklearn/svm/libsvm.pyx":402
|
|
*
|
|
*
|
|
* def decision_function( # <<<<<<<<<<<<<<
|
|
* np.ndarray[np.float64_t, ndim=2, mode='c'] X,
|
|
* np.ndarray[np.int32_t, ndim=1, mode='c'] support,
|
|
*/
|
|
|
|
/* Python wrapper */
|
|
static PyObject *__pyx_pw_7sklearn_3svm_6libsvm_7decision_function(PyObject *__pyx_self, PyObject *__pyx_args, PyObject *__pyx_kwds); /*proto*/
|
|
static char __pyx_doc_7sklearn_3svm_6libsvm_6decision_function[] = "\n Predict margin (libsvm name for this is predict_values)\n\n We have to reconstruct model and parameters to make sure we stay\n in sync with the python object.\n ";
|
|
static PyMethodDef __pyx_mdef_7sklearn_3svm_6libsvm_7decision_function = {__Pyx_NAMESTR("decision_function"), (PyCFunction)__pyx_pw_7sklearn_3svm_6libsvm_7decision_function, METH_VARARGS|METH_KEYWORDS, __Pyx_DOCSTR(__pyx_doc_7sklearn_3svm_6libsvm_6decision_function)};
|
|
static PyObject *__pyx_pw_7sklearn_3svm_6libsvm_7decision_function(PyObject *__pyx_self, PyObject *__pyx_args, PyObject *__pyx_kwds) {
|
|
PyArrayObject *__pyx_v_X = 0;
|
|
PyArrayObject *__pyx_v_support = 0;
|
|
PyArrayObject *__pyx_v_SV = 0;
|
|
PyArrayObject *__pyx_v_nSV = 0;
|
|
PyArrayObject *__pyx_v_sv_coef = 0;
|
|
PyArrayObject *__pyx_v_intercept = 0;
|
|
PyArrayObject *__pyx_v_probA = 0;
|
|
PyArrayObject *__pyx_v_probB = 0;
|
|
int __pyx_v_svm_type;
|
|
PyObject *__pyx_v_kernel = 0;
|
|
int __pyx_v_degree;
|
|
double __pyx_v_gamma;
|
|
double __pyx_v_coef0;
|
|
PyArrayObject *__pyx_v_class_weight = 0;
|
|
CYTHON_UNUSED PyArrayObject *__pyx_v_sample_weight = 0;
|
|
double __pyx_v_cache_size;
|
|
int __pyx_lineno = 0;
|
|
const char *__pyx_filename = NULL;
|
|
int __pyx_clineno = 0;
|
|
PyObject *__pyx_r = 0;
|
|
__Pyx_RefNannyDeclarations
|
|
__Pyx_RefNannySetupContext("decision_function (wrapper)", 0);
|
|
{
|
|
static PyObject **__pyx_pyargnames[] = {&__pyx_n_s_X,&__pyx_n_s_support,&__pyx_n_s_SV,&__pyx_n_s_nSV,&__pyx_n_s_sv_coef,&__pyx_n_s_intercept,&__pyx_n_s_probA,&__pyx_n_s_probB,&__pyx_n_s_svm_type,&__pyx_n_s_kernel,&__pyx_n_s_degree,&__pyx_n_s_gamma,&__pyx_n_s_coef0,&__pyx_n_s_class_weight,&__pyx_n_s_sample_weight,&__pyx_n_s_cache_size,0};
|
|
PyObject* values[16] = {0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0};
|
|
values[6] = (PyObject *)__pyx_k__20;
|
|
values[7] = (PyObject *)__pyx_k__21;
|
|
values[9] = ((PyObject *)__pyx_n_s_rbf);
|
|
values[13] = (PyObject *)__pyx_k__22;
|
|
values[14] = (PyObject *)__pyx_k__23;
|
|
if (unlikely(__pyx_kwds)) {
|
|
Py_ssize_t kw_args;
|
|
const Py_ssize_t pos_args = PyTuple_GET_SIZE(__pyx_args);
|
|
switch (pos_args) {
|
|
case 16: values[15] = PyTuple_GET_ITEM(__pyx_args, 15);
|
|
case 15: values[14] = PyTuple_GET_ITEM(__pyx_args, 14);
|
|
case 14: values[13] = PyTuple_GET_ITEM(__pyx_args, 13);
|
|
case 13: values[12] = PyTuple_GET_ITEM(__pyx_args, 12);
|
|
case 12: values[11] = PyTuple_GET_ITEM(__pyx_args, 11);
|
|
case 11: values[10] = PyTuple_GET_ITEM(__pyx_args, 10);
|
|
case 10: values[9] = PyTuple_GET_ITEM(__pyx_args, 9);
|
|
case 9: values[8] = PyTuple_GET_ITEM(__pyx_args, 8);
|
|
case 8: values[7] = PyTuple_GET_ITEM(__pyx_args, 7);
|
|
case 7: values[6] = PyTuple_GET_ITEM(__pyx_args, 6);
|
|
case 6: values[5] = PyTuple_GET_ITEM(__pyx_args, 5);
|
|
case 5: values[4] = PyTuple_GET_ITEM(__pyx_args, 4);
|
|
case 4: values[3] = PyTuple_GET_ITEM(__pyx_args, 3);
|
|
case 3: values[2] = PyTuple_GET_ITEM(__pyx_args, 2);
|
|
case 2: values[1] = PyTuple_GET_ITEM(__pyx_args, 1);
|
|
case 1: values[0] = PyTuple_GET_ITEM(__pyx_args, 0);
|
|
case 0: break;
|
|
default: goto __pyx_L5_argtuple_error;
|
|
}
|
|
kw_args = PyDict_Size(__pyx_kwds);
|
|
switch (pos_args) {
|
|
case 0:
|
|
if (likely((values[0] = PyDict_GetItem(__pyx_kwds, __pyx_n_s_X)) != 0)) kw_args--;
|
|
else goto __pyx_L5_argtuple_error;
|
|
case 1:
|
|
if (likely((values[1] = PyDict_GetItem(__pyx_kwds, __pyx_n_s_support)) != 0)) kw_args--;
|
|
else {
|
|
__Pyx_RaiseArgtupleInvalid("decision_function", 0, 6, 16, 1); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 402; __pyx_clineno = __LINE__; goto __pyx_L3_error;}
|
|
}
|
|
case 2:
|
|
if (likely((values[2] = PyDict_GetItem(__pyx_kwds, __pyx_n_s_SV)) != 0)) kw_args--;
|
|
else {
|
|
__Pyx_RaiseArgtupleInvalid("decision_function", 0, 6, 16, 2); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 402; __pyx_clineno = __LINE__; goto __pyx_L3_error;}
|
|
}
|
|
case 3:
|
|
if (likely((values[3] = PyDict_GetItem(__pyx_kwds, __pyx_n_s_nSV)) != 0)) kw_args--;
|
|
else {
|
|
__Pyx_RaiseArgtupleInvalid("decision_function", 0, 6, 16, 3); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 402; __pyx_clineno = __LINE__; goto __pyx_L3_error;}
|
|
}
|
|
case 4:
|
|
if (likely((values[4] = PyDict_GetItem(__pyx_kwds, __pyx_n_s_sv_coef)) != 0)) kw_args--;
|
|
else {
|
|
__Pyx_RaiseArgtupleInvalid("decision_function", 0, 6, 16, 4); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 402; __pyx_clineno = __LINE__; goto __pyx_L3_error;}
|
|
}
|
|
case 5:
|
|
if (likely((values[5] = PyDict_GetItem(__pyx_kwds, __pyx_n_s_intercept)) != 0)) kw_args--;
|
|
else {
|
|
__Pyx_RaiseArgtupleInvalid("decision_function", 0, 6, 16, 5); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 402; __pyx_clineno = __LINE__; goto __pyx_L3_error;}
|
|
}
|
|
case 6:
|
|
if (kw_args > 0) {
|
|
PyObject* value = PyDict_GetItem(__pyx_kwds, __pyx_n_s_probA);
|
|
if (value) { values[6] = value; kw_args--; }
|
|
}
|
|
case 7:
|
|
if (kw_args > 0) {
|
|
PyObject* value = PyDict_GetItem(__pyx_kwds, __pyx_n_s_probB);
|
|
if (value) { values[7] = value; kw_args--; }
|
|
}
|
|
case 8:
|
|
if (kw_args > 0) {
|
|
PyObject* value = PyDict_GetItem(__pyx_kwds, __pyx_n_s_svm_type);
|
|
if (value) { values[8] = value; kw_args--; }
|
|
}
|
|
case 9:
|
|
if (kw_args > 0) {
|
|
PyObject* value = PyDict_GetItem(__pyx_kwds, __pyx_n_s_kernel);
|
|
if (value) { values[9] = value; kw_args--; }
|
|
}
|
|
case 10:
|
|
if (kw_args > 0) {
|
|
PyObject* value = PyDict_GetItem(__pyx_kwds, __pyx_n_s_degree);
|
|
if (value) { values[10] = value; kw_args--; }
|
|
}
|
|
case 11:
|
|
if (kw_args > 0) {
|
|
PyObject* value = PyDict_GetItem(__pyx_kwds, __pyx_n_s_gamma);
|
|
if (value) { values[11] = value; kw_args--; }
|
|
}
|
|
case 12:
|
|
if (kw_args > 0) {
|
|
PyObject* value = PyDict_GetItem(__pyx_kwds, __pyx_n_s_coef0);
|
|
if (value) { values[12] = value; kw_args--; }
|
|
}
|
|
case 13:
|
|
if (kw_args > 0) {
|
|
PyObject* value = PyDict_GetItem(__pyx_kwds, __pyx_n_s_class_weight);
|
|
if (value) { values[13] = value; kw_args--; }
|
|
}
|
|
case 14:
|
|
if (kw_args > 0) {
|
|
PyObject* value = PyDict_GetItem(__pyx_kwds, __pyx_n_s_sample_weight);
|
|
if (value) { values[14] = value; kw_args--; }
|
|
}
|
|
case 15:
|
|
if (kw_args > 0) {
|
|
PyObject* value = PyDict_GetItem(__pyx_kwds, __pyx_n_s_cache_size);
|
|
if (value) { values[15] = value; kw_args--; }
|
|
}
|
|
}
|
|
if (unlikely(kw_args > 0)) {
|
|
if (unlikely(__Pyx_ParseOptionalKeywords(__pyx_kwds, __pyx_pyargnames, 0, values, pos_args, "decision_function") < 0)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 402; __pyx_clineno = __LINE__; goto __pyx_L3_error;}
|
|
}
|
|
} else {
|
|
switch (PyTuple_GET_SIZE(__pyx_args)) {
|
|
case 16: values[15] = PyTuple_GET_ITEM(__pyx_args, 15);
|
|
case 15: values[14] = PyTuple_GET_ITEM(__pyx_args, 14);
|
|
case 14: values[13] = PyTuple_GET_ITEM(__pyx_args, 13);
|
|
case 13: values[12] = PyTuple_GET_ITEM(__pyx_args, 12);
|
|
case 12: values[11] = PyTuple_GET_ITEM(__pyx_args, 11);
|
|
case 11: values[10] = PyTuple_GET_ITEM(__pyx_args, 10);
|
|
case 10: values[9] = PyTuple_GET_ITEM(__pyx_args, 9);
|
|
case 9: values[8] = PyTuple_GET_ITEM(__pyx_args, 8);
|
|
case 8: values[7] = PyTuple_GET_ITEM(__pyx_args, 7);
|
|
case 7: values[6] = PyTuple_GET_ITEM(__pyx_args, 6);
|
|
case 6: values[5] = PyTuple_GET_ITEM(__pyx_args, 5);
|
|
values[4] = PyTuple_GET_ITEM(__pyx_args, 4);
|
|
values[3] = PyTuple_GET_ITEM(__pyx_args, 3);
|
|
values[2] = PyTuple_GET_ITEM(__pyx_args, 2);
|
|
values[1] = PyTuple_GET_ITEM(__pyx_args, 1);
|
|
values[0] = PyTuple_GET_ITEM(__pyx_args, 0);
|
|
break;
|
|
default: goto __pyx_L5_argtuple_error;
|
|
}
|
|
}
|
|
__pyx_v_X = ((PyArrayObject *)values[0]);
|
|
__pyx_v_support = ((PyArrayObject *)values[1]);
|
|
__pyx_v_SV = ((PyArrayObject *)values[2]);
|
|
__pyx_v_nSV = ((PyArrayObject *)values[3]);
|
|
__pyx_v_sv_coef = ((PyArrayObject *)values[4]);
|
|
__pyx_v_intercept = ((PyArrayObject *)values[5]);
|
|
__pyx_v_probA = ((PyArrayObject *)values[6]);
|
|
__pyx_v_probB = ((PyArrayObject *)values[7]);
|
|
if (values[8]) {
|
|
__pyx_v_svm_type = __Pyx_PyInt_As_int(values[8]); if (unlikely((__pyx_v_svm_type == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 411; __pyx_clineno = __LINE__; goto __pyx_L3_error;}
|
|
} else {
|
|
__pyx_v_svm_type = ((int)0);
|
|
}
|
|
__pyx_v_kernel = values[9];
|
|
if (values[10]) {
|
|
__pyx_v_degree = __Pyx_PyInt_As_int(values[10]); if (unlikely((__pyx_v_degree == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 411; __pyx_clineno = __LINE__; goto __pyx_L3_error;}
|
|
} else {
|
|
__pyx_v_degree = ((int)3);
|
|
}
|
|
if (values[11]) {
|
|
__pyx_v_gamma = __pyx_PyFloat_AsDouble(values[11]); if (unlikely((__pyx_v_gamma == (double)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 412; __pyx_clineno = __LINE__; goto __pyx_L3_error;}
|
|
} else {
|
|
__pyx_v_gamma = ((double)0.1);
|
|
}
|
|
if (values[12]) {
|
|
__pyx_v_coef0 = __pyx_PyFloat_AsDouble(values[12]); if (unlikely((__pyx_v_coef0 == (double)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 412; __pyx_clineno = __LINE__; goto __pyx_L3_error;}
|
|
} else {
|
|
__pyx_v_coef0 = ((double)0.);
|
|
}
|
|
__pyx_v_class_weight = ((PyArrayObject *)values[13]);
|
|
__pyx_v_sample_weight = ((PyArrayObject *)values[14]);
|
|
if (values[15]) {
|
|
__pyx_v_cache_size = __pyx_PyFloat_AsDouble(values[15]); if (unlikely((__pyx_v_cache_size == (double)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 417; __pyx_clineno = __LINE__; goto __pyx_L3_error;}
|
|
} else {
|
|
__pyx_v_cache_size = ((double)100.);
|
|
}
|
|
}
|
|
goto __pyx_L4_argument_unpacking_done;
|
|
__pyx_L5_argtuple_error:;
|
|
__Pyx_RaiseArgtupleInvalid("decision_function", 0, 6, 16, PyTuple_GET_SIZE(__pyx_args)); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 402; __pyx_clineno = __LINE__; goto __pyx_L3_error;}
|
|
__pyx_L3_error:;
|
|
__Pyx_AddTraceback("sklearn.svm.libsvm.decision_function", __pyx_clineno, __pyx_lineno, __pyx_filename);
|
|
__Pyx_RefNannyFinishContext();
|
|
return NULL;
|
|
__pyx_L4_argument_unpacking_done:;
|
|
if (unlikely(!__Pyx_ArgTypeTest(((PyObject *)__pyx_v_X), __pyx_ptype_5numpy_ndarray, 1, "X", 0))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 403; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
if (unlikely(!__Pyx_ArgTypeTest(((PyObject *)__pyx_v_support), __pyx_ptype_5numpy_ndarray, 1, "support", 0))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 404; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
if (unlikely(!__Pyx_ArgTypeTest(((PyObject *)__pyx_v_SV), __pyx_ptype_5numpy_ndarray, 1, "SV", 0))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 405; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
if (unlikely(!__Pyx_ArgTypeTest(((PyObject *)__pyx_v_nSV), __pyx_ptype_5numpy_ndarray, 1, "nSV", 0))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 406; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
if (unlikely(!__Pyx_ArgTypeTest(((PyObject *)__pyx_v_sv_coef), __pyx_ptype_5numpy_ndarray, 1, "sv_coef", 0))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 407; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
if (unlikely(!__Pyx_ArgTypeTest(((PyObject *)__pyx_v_intercept), __pyx_ptype_5numpy_ndarray, 1, "intercept", 0))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 408; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
if (unlikely(!__Pyx_ArgTypeTest(((PyObject *)__pyx_v_probA), __pyx_ptype_5numpy_ndarray, 1, "probA", 0))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 409; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
if (unlikely(!__Pyx_ArgTypeTest(((PyObject *)__pyx_v_probB), __pyx_ptype_5numpy_ndarray, 1, "probB", 0))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 410; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
if (unlikely(!__Pyx_ArgTypeTest(((PyObject *)__pyx_v_class_weight), __pyx_ptype_5numpy_ndarray, 1, "class_weight", 0))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 413; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
if (unlikely(!__Pyx_ArgTypeTest(((PyObject *)__pyx_v_sample_weight), __pyx_ptype_5numpy_ndarray, 1, "sample_weight", 0))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 415; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__pyx_r = __pyx_pf_7sklearn_3svm_6libsvm_6decision_function(__pyx_self, __pyx_v_X, __pyx_v_support, __pyx_v_SV, __pyx_v_nSV, __pyx_v_sv_coef, __pyx_v_intercept, __pyx_v_probA, __pyx_v_probB, __pyx_v_svm_type, __pyx_v_kernel, __pyx_v_degree, __pyx_v_gamma, __pyx_v_coef0, __pyx_v_class_weight, __pyx_v_sample_weight, __pyx_v_cache_size);
|
|
|
|
/* function exit code */
|
|
goto __pyx_L0;
|
|
__pyx_L1_error:;
|
|
__pyx_r = NULL;
|
|
__pyx_L0:;
|
|
__Pyx_RefNannyFinishContext();
|
|
return __pyx_r;
|
|
}
|
|
|
|
static PyObject *__pyx_pf_7sklearn_3svm_6libsvm_6decision_function(CYTHON_UNUSED PyObject *__pyx_self, PyArrayObject *__pyx_v_X, PyArrayObject *__pyx_v_support, PyArrayObject *__pyx_v_SV, PyArrayObject *__pyx_v_nSV, PyArrayObject *__pyx_v_sv_coef, PyArrayObject *__pyx_v_intercept, PyArrayObject *__pyx_v_probA, PyArrayObject *__pyx_v_probB, int __pyx_v_svm_type, PyObject *__pyx_v_kernel, int __pyx_v_degree, double __pyx_v_gamma, double __pyx_v_coef0, PyArrayObject *__pyx_v_class_weight, CYTHON_UNUSED PyArrayObject *__pyx_v_sample_weight, double __pyx_v_cache_size) {
|
|
PyArrayObject *__pyx_v_dec_values = 0;
|
|
struct svm_parameter __pyx_v_param;
|
|
struct svm_model *__pyx_v_model;
|
|
npy_intp __pyx_v_n_class;
|
|
PyArrayObject *__pyx_v_class_weight_label = 0;
|
|
int __pyx_v_rv;
|
|
__Pyx_LocalBuf_ND __pyx_pybuffernd_SV;
|
|
__Pyx_Buffer __pyx_pybuffer_SV;
|
|
__Pyx_LocalBuf_ND __pyx_pybuffernd_X;
|
|
__Pyx_Buffer __pyx_pybuffer_X;
|
|
__Pyx_LocalBuf_ND __pyx_pybuffernd_class_weight;
|
|
__Pyx_Buffer __pyx_pybuffer_class_weight;
|
|
__Pyx_LocalBuf_ND __pyx_pybuffernd_class_weight_label;
|
|
__Pyx_Buffer __pyx_pybuffer_class_weight_label;
|
|
__Pyx_LocalBuf_ND __pyx_pybuffernd_dec_values;
|
|
__Pyx_Buffer __pyx_pybuffer_dec_values;
|
|
__Pyx_LocalBuf_ND __pyx_pybuffernd_intercept;
|
|
__Pyx_Buffer __pyx_pybuffer_intercept;
|
|
__Pyx_LocalBuf_ND __pyx_pybuffernd_nSV;
|
|
__Pyx_Buffer __pyx_pybuffer_nSV;
|
|
__Pyx_LocalBuf_ND __pyx_pybuffernd_probA;
|
|
__Pyx_Buffer __pyx_pybuffer_probA;
|
|
__Pyx_LocalBuf_ND __pyx_pybuffernd_probB;
|
|
__Pyx_Buffer __pyx_pybuffer_probB;
|
|
__Pyx_LocalBuf_ND __pyx_pybuffernd_sample_weight;
|
|
__Pyx_Buffer __pyx_pybuffer_sample_weight;
|
|
__Pyx_LocalBuf_ND __pyx_pybuffernd_support;
|
|
__Pyx_Buffer __pyx_pybuffer_support;
|
|
__Pyx_LocalBuf_ND __pyx_pybuffernd_sv_coef;
|
|
__Pyx_Buffer __pyx_pybuffer_sv_coef;
|
|
PyObject *__pyx_r = NULL;
|
|
__Pyx_RefNannyDeclarations
|
|
PyObject *__pyx_t_1 = NULL;
|
|
PyObject *__pyx_t_2 = NULL;
|
|
PyObject *__pyx_t_3 = NULL;
|
|
PyObject *__pyx_t_4 = NULL;
|
|
PyObject *__pyx_t_5 = NULL;
|
|
PyArrayObject *__pyx_t_6 = NULL;
|
|
int __pyx_t_7;
|
|
PyArrayObject *__pyx_t_8 = NULL;
|
|
int __pyx_t_9;
|
|
PyObject *__pyx_t_10 = NULL;
|
|
PyObject *__pyx_t_11 = NULL;
|
|
PyObject *__pyx_t_12 = NULL;
|
|
int __pyx_t_13;
|
|
char const *__pyx_t_14;
|
|
PyObject *__pyx_t_15 = NULL;
|
|
PyObject *__pyx_t_16 = NULL;
|
|
PyObject *__pyx_t_17 = NULL;
|
|
int __pyx_lineno = 0;
|
|
const char *__pyx_filename = NULL;
|
|
int __pyx_clineno = 0;
|
|
__Pyx_RefNannySetupContext("decision_function", 0);
|
|
__pyx_pybuffer_dec_values.pybuffer.buf = NULL;
|
|
__pyx_pybuffer_dec_values.refcount = 0;
|
|
__pyx_pybuffernd_dec_values.data = NULL;
|
|
__pyx_pybuffernd_dec_values.rcbuffer = &__pyx_pybuffer_dec_values;
|
|
__pyx_pybuffer_class_weight_label.pybuffer.buf = NULL;
|
|
__pyx_pybuffer_class_weight_label.refcount = 0;
|
|
__pyx_pybuffernd_class_weight_label.data = NULL;
|
|
__pyx_pybuffernd_class_weight_label.rcbuffer = &__pyx_pybuffer_class_weight_label;
|
|
__pyx_pybuffer_X.pybuffer.buf = NULL;
|
|
__pyx_pybuffer_X.refcount = 0;
|
|
__pyx_pybuffernd_X.data = NULL;
|
|
__pyx_pybuffernd_X.rcbuffer = &__pyx_pybuffer_X;
|
|
__pyx_pybuffer_support.pybuffer.buf = NULL;
|
|
__pyx_pybuffer_support.refcount = 0;
|
|
__pyx_pybuffernd_support.data = NULL;
|
|
__pyx_pybuffernd_support.rcbuffer = &__pyx_pybuffer_support;
|
|
__pyx_pybuffer_SV.pybuffer.buf = NULL;
|
|
__pyx_pybuffer_SV.refcount = 0;
|
|
__pyx_pybuffernd_SV.data = NULL;
|
|
__pyx_pybuffernd_SV.rcbuffer = &__pyx_pybuffer_SV;
|
|
__pyx_pybuffer_nSV.pybuffer.buf = NULL;
|
|
__pyx_pybuffer_nSV.refcount = 0;
|
|
__pyx_pybuffernd_nSV.data = NULL;
|
|
__pyx_pybuffernd_nSV.rcbuffer = &__pyx_pybuffer_nSV;
|
|
__pyx_pybuffer_sv_coef.pybuffer.buf = NULL;
|
|
__pyx_pybuffer_sv_coef.refcount = 0;
|
|
__pyx_pybuffernd_sv_coef.data = NULL;
|
|
__pyx_pybuffernd_sv_coef.rcbuffer = &__pyx_pybuffer_sv_coef;
|
|
__pyx_pybuffer_intercept.pybuffer.buf = NULL;
|
|
__pyx_pybuffer_intercept.refcount = 0;
|
|
__pyx_pybuffernd_intercept.data = NULL;
|
|
__pyx_pybuffernd_intercept.rcbuffer = &__pyx_pybuffer_intercept;
|
|
__pyx_pybuffer_probA.pybuffer.buf = NULL;
|
|
__pyx_pybuffer_probA.refcount = 0;
|
|
__pyx_pybuffernd_probA.data = NULL;
|
|
__pyx_pybuffernd_probA.rcbuffer = &__pyx_pybuffer_probA;
|
|
__pyx_pybuffer_probB.pybuffer.buf = NULL;
|
|
__pyx_pybuffer_probB.refcount = 0;
|
|
__pyx_pybuffernd_probB.data = NULL;
|
|
__pyx_pybuffernd_probB.rcbuffer = &__pyx_pybuffer_probB;
|
|
__pyx_pybuffer_class_weight.pybuffer.buf = NULL;
|
|
__pyx_pybuffer_class_weight.refcount = 0;
|
|
__pyx_pybuffernd_class_weight.data = NULL;
|
|
__pyx_pybuffernd_class_weight.rcbuffer = &__pyx_pybuffer_class_weight;
|
|
__pyx_pybuffer_sample_weight.pybuffer.buf = NULL;
|
|
__pyx_pybuffer_sample_weight.refcount = 0;
|
|
__pyx_pybuffernd_sample_weight.data = NULL;
|
|
__pyx_pybuffernd_sample_weight.rcbuffer = &__pyx_pybuffer_sample_weight;
|
|
{
|
|
__Pyx_BufFmt_StackElem __pyx_stack[1];
|
|
if (unlikely(__Pyx_GetBufferAndValidate(&__pyx_pybuffernd_X.rcbuffer->pybuffer, (PyObject*)__pyx_v_X, &__Pyx_TypeInfo_nn___pyx_t_5numpy_float64_t, PyBUF_FORMAT| PyBUF_C_CONTIGUOUS, 2, 0, __pyx_stack) == -1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 402; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
}
|
|
__pyx_pybuffernd_X.diminfo[0].strides = __pyx_pybuffernd_X.rcbuffer->pybuffer.strides[0]; __pyx_pybuffernd_X.diminfo[0].shape = __pyx_pybuffernd_X.rcbuffer->pybuffer.shape[0]; __pyx_pybuffernd_X.diminfo[1].strides = __pyx_pybuffernd_X.rcbuffer->pybuffer.strides[1]; __pyx_pybuffernd_X.diminfo[1].shape = __pyx_pybuffernd_X.rcbuffer->pybuffer.shape[1];
|
|
{
|
|
__Pyx_BufFmt_StackElem __pyx_stack[1];
|
|
if (unlikely(__Pyx_GetBufferAndValidate(&__pyx_pybuffernd_support.rcbuffer->pybuffer, (PyObject*)__pyx_v_support, &__Pyx_TypeInfo_nn___pyx_t_5numpy_int32_t, PyBUF_FORMAT| PyBUF_C_CONTIGUOUS, 1, 0, __pyx_stack) == -1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 402; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
}
|
|
__pyx_pybuffernd_support.diminfo[0].strides = __pyx_pybuffernd_support.rcbuffer->pybuffer.strides[0]; __pyx_pybuffernd_support.diminfo[0].shape = __pyx_pybuffernd_support.rcbuffer->pybuffer.shape[0];
|
|
{
|
|
__Pyx_BufFmt_StackElem __pyx_stack[1];
|
|
if (unlikely(__Pyx_GetBufferAndValidate(&__pyx_pybuffernd_SV.rcbuffer->pybuffer, (PyObject*)__pyx_v_SV, &__Pyx_TypeInfo_nn___pyx_t_5numpy_float64_t, PyBUF_FORMAT| PyBUF_C_CONTIGUOUS, 2, 0, __pyx_stack) == -1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 402; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
}
|
|
__pyx_pybuffernd_SV.diminfo[0].strides = __pyx_pybuffernd_SV.rcbuffer->pybuffer.strides[0]; __pyx_pybuffernd_SV.diminfo[0].shape = __pyx_pybuffernd_SV.rcbuffer->pybuffer.shape[0]; __pyx_pybuffernd_SV.diminfo[1].strides = __pyx_pybuffernd_SV.rcbuffer->pybuffer.strides[1]; __pyx_pybuffernd_SV.diminfo[1].shape = __pyx_pybuffernd_SV.rcbuffer->pybuffer.shape[1];
|
|
{
|
|
__Pyx_BufFmt_StackElem __pyx_stack[1];
|
|
if (unlikely(__Pyx_GetBufferAndValidate(&__pyx_pybuffernd_nSV.rcbuffer->pybuffer, (PyObject*)__pyx_v_nSV, &__Pyx_TypeInfo_nn___pyx_t_5numpy_int32_t, PyBUF_FORMAT| PyBUF_C_CONTIGUOUS, 1, 0, __pyx_stack) == -1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 402; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
}
|
|
__pyx_pybuffernd_nSV.diminfo[0].strides = __pyx_pybuffernd_nSV.rcbuffer->pybuffer.strides[0]; __pyx_pybuffernd_nSV.diminfo[0].shape = __pyx_pybuffernd_nSV.rcbuffer->pybuffer.shape[0];
|
|
{
|
|
__Pyx_BufFmt_StackElem __pyx_stack[1];
|
|
if (unlikely(__Pyx_GetBufferAndValidate(&__pyx_pybuffernd_sv_coef.rcbuffer->pybuffer, (PyObject*)__pyx_v_sv_coef, &__Pyx_TypeInfo_nn___pyx_t_5numpy_float64_t, PyBUF_FORMAT| PyBUF_C_CONTIGUOUS, 2, 0, __pyx_stack) == -1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 402; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
}
|
|
__pyx_pybuffernd_sv_coef.diminfo[0].strides = __pyx_pybuffernd_sv_coef.rcbuffer->pybuffer.strides[0]; __pyx_pybuffernd_sv_coef.diminfo[0].shape = __pyx_pybuffernd_sv_coef.rcbuffer->pybuffer.shape[0]; __pyx_pybuffernd_sv_coef.diminfo[1].strides = __pyx_pybuffernd_sv_coef.rcbuffer->pybuffer.strides[1]; __pyx_pybuffernd_sv_coef.diminfo[1].shape = __pyx_pybuffernd_sv_coef.rcbuffer->pybuffer.shape[1];
|
|
{
|
|
__Pyx_BufFmt_StackElem __pyx_stack[1];
|
|
if (unlikely(__Pyx_GetBufferAndValidate(&__pyx_pybuffernd_intercept.rcbuffer->pybuffer, (PyObject*)__pyx_v_intercept, &__Pyx_TypeInfo_nn___pyx_t_5numpy_float64_t, PyBUF_FORMAT| PyBUF_C_CONTIGUOUS, 1, 0, __pyx_stack) == -1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 402; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
}
|
|
__pyx_pybuffernd_intercept.diminfo[0].strides = __pyx_pybuffernd_intercept.rcbuffer->pybuffer.strides[0]; __pyx_pybuffernd_intercept.diminfo[0].shape = __pyx_pybuffernd_intercept.rcbuffer->pybuffer.shape[0];
|
|
{
|
|
__Pyx_BufFmt_StackElem __pyx_stack[1];
|
|
if (unlikely(__Pyx_GetBufferAndValidate(&__pyx_pybuffernd_probA.rcbuffer->pybuffer, (PyObject*)__pyx_v_probA, &__Pyx_TypeInfo_nn___pyx_t_5numpy_float64_t, PyBUF_FORMAT| PyBUF_C_CONTIGUOUS, 1, 0, __pyx_stack) == -1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 402; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
}
|
|
__pyx_pybuffernd_probA.diminfo[0].strides = __pyx_pybuffernd_probA.rcbuffer->pybuffer.strides[0]; __pyx_pybuffernd_probA.diminfo[0].shape = __pyx_pybuffernd_probA.rcbuffer->pybuffer.shape[0];
|
|
{
|
|
__Pyx_BufFmt_StackElem __pyx_stack[1];
|
|
if (unlikely(__Pyx_GetBufferAndValidate(&__pyx_pybuffernd_probB.rcbuffer->pybuffer, (PyObject*)__pyx_v_probB, &__Pyx_TypeInfo_nn___pyx_t_5numpy_float64_t, PyBUF_FORMAT| PyBUF_C_CONTIGUOUS, 1, 0, __pyx_stack) == -1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 402; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
}
|
|
__pyx_pybuffernd_probB.diminfo[0].strides = __pyx_pybuffernd_probB.rcbuffer->pybuffer.strides[0]; __pyx_pybuffernd_probB.diminfo[0].shape = __pyx_pybuffernd_probB.rcbuffer->pybuffer.shape[0];
|
|
{
|
|
__Pyx_BufFmt_StackElem __pyx_stack[1];
|
|
if (unlikely(__Pyx_GetBufferAndValidate(&__pyx_pybuffernd_class_weight.rcbuffer->pybuffer, (PyObject*)__pyx_v_class_weight, &__Pyx_TypeInfo_nn___pyx_t_5numpy_float64_t, PyBUF_FORMAT| PyBUF_C_CONTIGUOUS, 1, 0, __pyx_stack) == -1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 402; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
}
|
|
__pyx_pybuffernd_class_weight.diminfo[0].strides = __pyx_pybuffernd_class_weight.rcbuffer->pybuffer.strides[0]; __pyx_pybuffernd_class_weight.diminfo[0].shape = __pyx_pybuffernd_class_weight.rcbuffer->pybuffer.shape[0];
|
|
{
|
|
__Pyx_BufFmt_StackElem __pyx_stack[1];
|
|
if (unlikely(__Pyx_GetBufferAndValidate(&__pyx_pybuffernd_sample_weight.rcbuffer->pybuffer, (PyObject*)__pyx_v_sample_weight, &__Pyx_TypeInfo_nn___pyx_t_5numpy_float64_t, PyBUF_FORMAT| PyBUF_C_CONTIGUOUS, 1, 0, __pyx_stack) == -1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 402; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
}
|
|
__pyx_pybuffernd_sample_weight.diminfo[0].strides = __pyx_pybuffernd_sample_weight.rcbuffer->pybuffer.strides[0]; __pyx_pybuffernd_sample_weight.diminfo[0].shape = __pyx_pybuffernd_sample_weight.rcbuffer->pybuffer.shape[0];
|
|
|
|
/* "sklearn/svm/libsvm.pyx":430
|
|
*
|
|
* cdef np.ndarray[np.int32_t, ndim=1, mode='c'] \
|
|
* class_weight_label = np.arange(class_weight.shape[0], dtype=np.int32) # <<<<<<<<<<<<<<
|
|
*
|
|
* cdef int rv
|
|
*/
|
|
__pyx_t_1 = __Pyx_GetModuleGlobalName(__pyx_n_s_np); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 430; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_1);
|
|
__pyx_t_2 = __Pyx_PyObject_GetAttrStr(__pyx_t_1, __pyx_n_s_arange); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 430; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_2);
|
|
__Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0;
|
|
__pyx_t_1 = __Pyx_PyInt_From_Py_intptr_t((__pyx_v_class_weight->dimensions[0])); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 430; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_1);
|
|
__pyx_t_3 = PyTuple_New(1); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 430; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_3);
|
|
PyTuple_SET_ITEM(__pyx_t_3, 0, __pyx_t_1);
|
|
__Pyx_GIVEREF(__pyx_t_1);
|
|
__pyx_t_1 = 0;
|
|
__pyx_t_1 = PyDict_New(); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 430; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_1);
|
|
__pyx_t_4 = __Pyx_GetModuleGlobalName(__pyx_n_s_np); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 430; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_4);
|
|
__pyx_t_5 = __Pyx_PyObject_GetAttrStr(__pyx_t_4, __pyx_n_s_int32); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 430; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_5);
|
|
__Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0;
|
|
if (PyDict_SetItem(__pyx_t_1, __pyx_n_s_dtype, __pyx_t_5) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 430; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_DECREF(__pyx_t_5); __pyx_t_5 = 0;
|
|
__pyx_t_5 = __Pyx_PyObject_Call(__pyx_t_2, __pyx_t_3, __pyx_t_1); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 430; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_5);
|
|
__Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0;
|
|
__Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0;
|
|
__Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0;
|
|
if (!(likely(((__pyx_t_5) == Py_None) || likely(__Pyx_TypeTest(__pyx_t_5, __pyx_ptype_5numpy_ndarray))))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 430; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__pyx_t_6 = ((PyArrayObject *)__pyx_t_5);
|
|
{
|
|
__Pyx_BufFmt_StackElem __pyx_stack[1];
|
|
if (unlikely(__Pyx_GetBufferAndValidate(&__pyx_pybuffernd_class_weight_label.rcbuffer->pybuffer, (PyObject*)__pyx_t_6, &__Pyx_TypeInfo_nn___pyx_t_5numpy_int32_t, PyBUF_FORMAT| PyBUF_C_CONTIGUOUS, 1, 0, __pyx_stack) == -1)) {
|
|
__pyx_v_class_weight_label = ((PyArrayObject *)Py_None); __Pyx_INCREF(Py_None); __pyx_pybuffernd_class_weight_label.rcbuffer->pybuffer.buf = NULL;
|
|
{__pyx_filename = __pyx_f[0]; __pyx_lineno = 429; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
} else {__pyx_pybuffernd_class_weight_label.diminfo[0].strides = __pyx_pybuffernd_class_weight_label.rcbuffer->pybuffer.strides[0]; __pyx_pybuffernd_class_weight_label.diminfo[0].shape = __pyx_pybuffernd_class_weight_label.rcbuffer->pybuffer.shape[0];
|
|
}
|
|
}
|
|
__pyx_t_6 = 0;
|
|
__pyx_v_class_weight_label = ((PyArrayObject *)__pyx_t_5);
|
|
__pyx_t_5 = 0;
|
|
|
|
/* "sklearn/svm/libsvm.pyx":434
|
|
* cdef int rv
|
|
*
|
|
* set_predict_params(¶m, svm_type, kernel, degree, gamma, coef0, # <<<<<<<<<<<<<<
|
|
* cache_size, 0, <int>class_weight.shape[0],
|
|
* class_weight_label.data, class_weight.data)
|
|
*/
|
|
__pyx_f_7sklearn_3svm_6libsvm_set_predict_params((&__pyx_v_param), __pyx_v_svm_type, __pyx_v_kernel, __pyx_v_degree, __pyx_v_gamma, __pyx_v_coef0, __pyx_v_cache_size, 0, ((int)(__pyx_v_class_weight->dimensions[0])), __pyx_v_class_weight_label->data, __pyx_v_class_weight->data); if (unlikely(PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 434; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
|
|
/* "sklearn/svm/libsvm.pyx":438
|
|
* class_weight_label.data, class_weight.data)
|
|
*
|
|
* model = set_model(¶m, <int> nSV.shape[0], SV.data, SV.shape, # <<<<<<<<<<<<<<
|
|
* support.data, support.shape, sv_coef.strides,
|
|
* sv_coef.data, intercept.data, nSV.data,
|
|
*/
|
|
__pyx_v_model = set_model((&__pyx_v_param), ((int)(__pyx_v_nSV->dimensions[0])), __pyx_v_SV->data, __pyx_v_SV->dimensions, __pyx_v_support->data, __pyx_v_support->dimensions, __pyx_v_sv_coef->strides, __pyx_v_sv_coef->data, __pyx_v_intercept->data, __pyx_v_nSV->data, __pyx_v_probA->data, __pyx_v_probB->data);
|
|
|
|
/* "sklearn/svm/libsvm.pyx":443
|
|
* probA.data, probB.data)
|
|
*
|
|
* if svm_type > 1: # <<<<<<<<<<<<<<
|
|
* n_class = 1
|
|
* else:
|
|
*/
|
|
__pyx_t_7 = ((__pyx_v_svm_type > 1) != 0);
|
|
if (__pyx_t_7) {
|
|
|
|
/* "sklearn/svm/libsvm.pyx":444
|
|
*
|
|
* if svm_type > 1:
|
|
* n_class = 1 # <<<<<<<<<<<<<<
|
|
* else:
|
|
* n_class = get_nr(model)
|
|
*/
|
|
__pyx_v_n_class = 1;
|
|
goto __pyx_L3;
|
|
}
|
|
/*else*/ {
|
|
|
|
/* "sklearn/svm/libsvm.pyx":446
|
|
* n_class = 1
|
|
* else:
|
|
* n_class = get_nr(model) # <<<<<<<<<<<<<<
|
|
* n_class = n_class * (n_class - 1) / 2
|
|
*
|
|
*/
|
|
__pyx_v_n_class = get_nr(__pyx_v_model);
|
|
|
|
/* "sklearn/svm/libsvm.pyx":447
|
|
* else:
|
|
* n_class = get_nr(model)
|
|
* n_class = n_class * (n_class - 1) / 2 # <<<<<<<<<<<<<<
|
|
*
|
|
* try:
|
|
*/
|
|
__pyx_v_n_class = __Pyx_div_long((__pyx_v_n_class * (__pyx_v_n_class - 1)), 2);
|
|
}
|
|
__pyx_L3:;
|
|
|
|
/* "sklearn/svm/libsvm.pyx":449
|
|
* n_class = n_class * (n_class - 1) / 2
|
|
*
|
|
* try: # <<<<<<<<<<<<<<
|
|
* dec_values = np.empty((X.shape[0], n_class), dtype=np.float64)
|
|
* with nogil:
|
|
*/
|
|
/*try:*/ {
|
|
|
|
/* "sklearn/svm/libsvm.pyx":450
|
|
*
|
|
* try:
|
|
* dec_values = np.empty((X.shape[0], n_class), dtype=np.float64) # <<<<<<<<<<<<<<
|
|
* with nogil:
|
|
* rv = copy_predict_values(X.data, model, X.shape, dec_values.data, n_class)
|
|
*/
|
|
__pyx_t_5 = __Pyx_GetModuleGlobalName(__pyx_n_s_np); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 450; __pyx_clineno = __LINE__; goto __pyx_L5_error;}
|
|
__Pyx_GOTREF(__pyx_t_5);
|
|
__pyx_t_1 = __Pyx_PyObject_GetAttrStr(__pyx_t_5, __pyx_n_s_empty); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 450; __pyx_clineno = __LINE__; goto __pyx_L5_error;}
|
|
__Pyx_GOTREF(__pyx_t_1);
|
|
__Pyx_DECREF(__pyx_t_5); __pyx_t_5 = 0;
|
|
__pyx_t_5 = __Pyx_PyInt_From_Py_intptr_t((__pyx_v_X->dimensions[0])); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 450; __pyx_clineno = __LINE__; goto __pyx_L5_error;}
|
|
__Pyx_GOTREF(__pyx_t_5);
|
|
__pyx_t_3 = __Pyx_PyInt_From_Py_intptr_t(__pyx_v_n_class); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 450; __pyx_clineno = __LINE__; goto __pyx_L5_error;}
|
|
__Pyx_GOTREF(__pyx_t_3);
|
|
__pyx_t_2 = PyTuple_New(2); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 450; __pyx_clineno = __LINE__; goto __pyx_L5_error;}
|
|
__Pyx_GOTREF(__pyx_t_2);
|
|
PyTuple_SET_ITEM(__pyx_t_2, 0, __pyx_t_5);
|
|
__Pyx_GIVEREF(__pyx_t_5);
|
|
PyTuple_SET_ITEM(__pyx_t_2, 1, __pyx_t_3);
|
|
__Pyx_GIVEREF(__pyx_t_3);
|
|
__pyx_t_5 = 0;
|
|
__pyx_t_3 = 0;
|
|
__pyx_t_3 = PyTuple_New(1); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 450; __pyx_clineno = __LINE__; goto __pyx_L5_error;}
|
|
__Pyx_GOTREF(__pyx_t_3);
|
|
PyTuple_SET_ITEM(__pyx_t_3, 0, __pyx_t_2);
|
|
__Pyx_GIVEREF(__pyx_t_2);
|
|
__pyx_t_2 = 0;
|
|
__pyx_t_2 = PyDict_New(); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 450; __pyx_clineno = __LINE__; goto __pyx_L5_error;}
|
|
__Pyx_GOTREF(__pyx_t_2);
|
|
__pyx_t_5 = __Pyx_GetModuleGlobalName(__pyx_n_s_np); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 450; __pyx_clineno = __LINE__; goto __pyx_L5_error;}
|
|
__Pyx_GOTREF(__pyx_t_5);
|
|
__pyx_t_4 = __Pyx_PyObject_GetAttrStr(__pyx_t_5, __pyx_n_s_float64); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 450; __pyx_clineno = __LINE__; goto __pyx_L5_error;}
|
|
__Pyx_GOTREF(__pyx_t_4);
|
|
__Pyx_DECREF(__pyx_t_5); __pyx_t_5 = 0;
|
|
if (PyDict_SetItem(__pyx_t_2, __pyx_n_s_dtype, __pyx_t_4) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 450; __pyx_clineno = __LINE__; goto __pyx_L5_error;}
|
|
__Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0;
|
|
__pyx_t_4 = __Pyx_PyObject_Call(__pyx_t_1, __pyx_t_3, __pyx_t_2); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 450; __pyx_clineno = __LINE__; goto __pyx_L5_error;}
|
|
__Pyx_GOTREF(__pyx_t_4);
|
|
__Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0;
|
|
__Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0;
|
|
__Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0;
|
|
if (!(likely(((__pyx_t_4) == Py_None) || likely(__Pyx_TypeTest(__pyx_t_4, __pyx_ptype_5numpy_ndarray))))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 450; __pyx_clineno = __LINE__; goto __pyx_L5_error;}
|
|
__pyx_t_8 = ((PyArrayObject *)__pyx_t_4);
|
|
{
|
|
__Pyx_BufFmt_StackElem __pyx_stack[1];
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_dec_values.rcbuffer->pybuffer);
|
|
__pyx_t_9 = __Pyx_GetBufferAndValidate(&__pyx_pybuffernd_dec_values.rcbuffer->pybuffer, (PyObject*)__pyx_t_8, &__Pyx_TypeInfo_nn___pyx_t_5numpy_float64_t, PyBUF_FORMAT| PyBUF_C_CONTIGUOUS, 2, 0, __pyx_stack);
|
|
if (unlikely(__pyx_t_9 < 0)) {
|
|
PyErr_Fetch(&__pyx_t_10, &__pyx_t_11, &__pyx_t_12);
|
|
if (unlikely(__Pyx_GetBufferAndValidate(&__pyx_pybuffernd_dec_values.rcbuffer->pybuffer, (PyObject*)__pyx_v_dec_values, &__Pyx_TypeInfo_nn___pyx_t_5numpy_float64_t, PyBUF_FORMAT| PyBUF_C_CONTIGUOUS, 2, 0, __pyx_stack) == -1)) {
|
|
Py_XDECREF(__pyx_t_10); Py_XDECREF(__pyx_t_11); Py_XDECREF(__pyx_t_12);
|
|
__Pyx_RaiseBufferFallbackError();
|
|
} else {
|
|
PyErr_Restore(__pyx_t_10, __pyx_t_11, __pyx_t_12);
|
|
}
|
|
}
|
|
__pyx_pybuffernd_dec_values.diminfo[0].strides = __pyx_pybuffernd_dec_values.rcbuffer->pybuffer.strides[0]; __pyx_pybuffernd_dec_values.diminfo[0].shape = __pyx_pybuffernd_dec_values.rcbuffer->pybuffer.shape[0]; __pyx_pybuffernd_dec_values.diminfo[1].strides = __pyx_pybuffernd_dec_values.rcbuffer->pybuffer.strides[1]; __pyx_pybuffernd_dec_values.diminfo[1].shape = __pyx_pybuffernd_dec_values.rcbuffer->pybuffer.shape[1];
|
|
if (unlikely(__pyx_t_9 < 0)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 450; __pyx_clineno = __LINE__; goto __pyx_L5_error;}
|
|
}
|
|
__pyx_t_8 = 0;
|
|
__pyx_v_dec_values = ((PyArrayObject *)__pyx_t_4);
|
|
__pyx_t_4 = 0;
|
|
|
|
/* "sklearn/svm/libsvm.pyx":451
|
|
* try:
|
|
* dec_values = np.empty((X.shape[0], n_class), dtype=np.float64)
|
|
* with nogil: # <<<<<<<<<<<<<<
|
|
* rv = copy_predict_values(X.data, model, X.shape, dec_values.data, n_class)
|
|
* if rv < 0:
|
|
*/
|
|
{
|
|
#ifdef WITH_THREAD
|
|
PyThreadState *_save;
|
|
Py_UNBLOCK_THREADS
|
|
#endif
|
|
/*try:*/ {
|
|
|
|
/* "sklearn/svm/libsvm.pyx":452
|
|
* dec_values = np.empty((X.shape[0], n_class), dtype=np.float64)
|
|
* with nogil:
|
|
* rv = copy_predict_values(X.data, model, X.shape, dec_values.data, n_class) # <<<<<<<<<<<<<<
|
|
* if rv < 0:
|
|
* raise MemoryError("We've run out of memory")
|
|
*/
|
|
__pyx_v_rv = copy_predict_values(__pyx_v_X->data, __pyx_v_model, __pyx_v_X->dimensions, __pyx_v_dec_values->data, __pyx_v_n_class);
|
|
}
|
|
|
|
/* "sklearn/svm/libsvm.pyx":451
|
|
* try:
|
|
* dec_values = np.empty((X.shape[0], n_class), dtype=np.float64)
|
|
* with nogil: # <<<<<<<<<<<<<<
|
|
* rv = copy_predict_values(X.data, model, X.shape, dec_values.data, n_class)
|
|
* if rv < 0:
|
|
*/
|
|
/*finally:*/ {
|
|
/*normal exit:*/{
|
|
#ifdef WITH_THREAD
|
|
Py_BLOCK_THREADS
|
|
#endif
|
|
goto __pyx_L9;
|
|
}
|
|
__pyx_L9:;
|
|
}
|
|
}
|
|
|
|
/* "sklearn/svm/libsvm.pyx":453
|
|
* with nogil:
|
|
* rv = copy_predict_values(X.data, model, X.shape, dec_values.data, n_class)
|
|
* if rv < 0: # <<<<<<<<<<<<<<
|
|
* raise MemoryError("We've run out of memory")
|
|
* finally:
|
|
*/
|
|
__pyx_t_7 = ((__pyx_v_rv < 0) != 0);
|
|
if (__pyx_t_7) {
|
|
|
|
/* "sklearn/svm/libsvm.pyx":454
|
|
* rv = copy_predict_values(X.data, model, X.shape, dec_values.data, n_class)
|
|
* if rv < 0:
|
|
* raise MemoryError("We've run out of memory") # <<<<<<<<<<<<<<
|
|
* finally:
|
|
* free_model(model)
|
|
*/
|
|
__pyx_t_4 = __Pyx_PyObject_Call(__pyx_builtin_MemoryError, __pyx_tuple__24, NULL); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 454; __pyx_clineno = __LINE__; goto __pyx_L5_error;}
|
|
__Pyx_GOTREF(__pyx_t_4);
|
|
__Pyx_Raise(__pyx_t_4, 0, 0, 0);
|
|
__Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0;
|
|
{__pyx_filename = __pyx_f[0]; __pyx_lineno = 454; __pyx_clineno = __LINE__; goto __pyx_L5_error;}
|
|
}
|
|
}
|
|
|
|
/* "sklearn/svm/libsvm.pyx":456
|
|
* raise MemoryError("We've run out of memory")
|
|
* finally:
|
|
* free_model(model) # <<<<<<<<<<<<<<
|
|
*
|
|
* return dec_values
|
|
*/
|
|
/*finally:*/ {
|
|
/*normal exit:*/{
|
|
free_model(__pyx_v_model);
|
|
goto __pyx_L6;
|
|
}
|
|
/*exception exit:*/{
|
|
__pyx_L5_error:;
|
|
__pyx_t_12 = 0; __pyx_t_11 = 0; __pyx_t_10 = 0; __pyx_t_15 = 0; __pyx_t_16 = 0; __pyx_t_17 = 0;
|
|
__Pyx_XDECREF(__pyx_t_5); __pyx_t_5 = 0;
|
|
__Pyx_XDECREF(__pyx_t_1); __pyx_t_1 = 0;
|
|
__Pyx_XDECREF(__pyx_t_3); __pyx_t_3 = 0;
|
|
__Pyx_XDECREF(__pyx_t_2); __pyx_t_2 = 0;
|
|
__Pyx_XDECREF(__pyx_t_4); __pyx_t_4 = 0;
|
|
if (PY_MAJOR_VERSION >= 3) __Pyx_ExceptionSwap(&__pyx_t_15, &__pyx_t_16, &__pyx_t_17);
|
|
if ((PY_MAJOR_VERSION < 3) || unlikely(__Pyx_GetException(&__pyx_t_12, &__pyx_t_11, &__pyx_t_10) < 0)) __Pyx_ErrFetch(&__pyx_t_12, &__pyx_t_11, &__pyx_t_10);
|
|
__Pyx_XGOTREF(__pyx_t_12);
|
|
__Pyx_XGOTREF(__pyx_t_11);
|
|
__Pyx_XGOTREF(__pyx_t_10);
|
|
__Pyx_XGOTREF(__pyx_t_15);
|
|
__Pyx_XGOTREF(__pyx_t_16);
|
|
__Pyx_XGOTREF(__pyx_t_17);
|
|
__pyx_t_9 = __pyx_lineno; __pyx_t_13 = __pyx_clineno; __pyx_t_14 = __pyx_filename;
|
|
{
|
|
free_model(__pyx_v_model);
|
|
}
|
|
if (PY_MAJOR_VERSION >= 3) {
|
|
__Pyx_XGIVEREF(__pyx_t_15);
|
|
__Pyx_XGIVEREF(__pyx_t_16);
|
|
__Pyx_XGIVEREF(__pyx_t_17);
|
|
__Pyx_ExceptionReset(__pyx_t_15, __pyx_t_16, __pyx_t_17);
|
|
}
|
|
__Pyx_XGIVEREF(__pyx_t_12);
|
|
__Pyx_XGIVEREF(__pyx_t_11);
|
|
__Pyx_XGIVEREF(__pyx_t_10);
|
|
__Pyx_ErrRestore(__pyx_t_12, __pyx_t_11, __pyx_t_10);
|
|
__pyx_t_12 = 0; __pyx_t_11 = 0; __pyx_t_10 = 0; __pyx_t_15 = 0; __pyx_t_16 = 0; __pyx_t_17 = 0;
|
|
__pyx_lineno = __pyx_t_9; __pyx_clineno = __pyx_t_13; __pyx_filename = __pyx_t_14;
|
|
goto __pyx_L1_error;
|
|
}
|
|
__pyx_L6:;
|
|
}
|
|
|
|
/* "sklearn/svm/libsvm.pyx":458
|
|
* free_model(model)
|
|
*
|
|
* return dec_values # <<<<<<<<<<<<<<
|
|
*
|
|
*
|
|
*/
|
|
__Pyx_XDECREF(__pyx_r);
|
|
__Pyx_INCREF(((PyObject *)__pyx_v_dec_values));
|
|
__pyx_r = ((PyObject *)__pyx_v_dec_values);
|
|
goto __pyx_L0;
|
|
|
|
/* "sklearn/svm/libsvm.pyx":402
|
|
*
|
|
*
|
|
* def decision_function( # <<<<<<<<<<<<<<
|
|
* np.ndarray[np.float64_t, ndim=2, mode='c'] X,
|
|
* np.ndarray[np.int32_t, ndim=1, mode='c'] support,
|
|
*/
|
|
|
|
/* function exit code */
|
|
__pyx_L1_error:;
|
|
__Pyx_XDECREF(__pyx_t_1);
|
|
__Pyx_XDECREF(__pyx_t_2);
|
|
__Pyx_XDECREF(__pyx_t_3);
|
|
__Pyx_XDECREF(__pyx_t_4);
|
|
__Pyx_XDECREF(__pyx_t_5);
|
|
{ PyObject *__pyx_type, *__pyx_value, *__pyx_tb;
|
|
__Pyx_ErrFetch(&__pyx_type, &__pyx_value, &__pyx_tb);
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_SV.rcbuffer->pybuffer);
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_X.rcbuffer->pybuffer);
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_class_weight.rcbuffer->pybuffer);
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_class_weight_label.rcbuffer->pybuffer);
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_dec_values.rcbuffer->pybuffer);
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_intercept.rcbuffer->pybuffer);
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_nSV.rcbuffer->pybuffer);
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_probA.rcbuffer->pybuffer);
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_probB.rcbuffer->pybuffer);
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_sample_weight.rcbuffer->pybuffer);
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_support.rcbuffer->pybuffer);
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_sv_coef.rcbuffer->pybuffer);
|
|
__Pyx_ErrRestore(__pyx_type, __pyx_value, __pyx_tb);}
|
|
__Pyx_AddTraceback("sklearn.svm.libsvm.decision_function", __pyx_clineno, __pyx_lineno, __pyx_filename);
|
|
__pyx_r = NULL;
|
|
goto __pyx_L2;
|
|
__pyx_L0:;
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_SV.rcbuffer->pybuffer);
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_X.rcbuffer->pybuffer);
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_class_weight.rcbuffer->pybuffer);
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_class_weight_label.rcbuffer->pybuffer);
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_dec_values.rcbuffer->pybuffer);
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_intercept.rcbuffer->pybuffer);
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_nSV.rcbuffer->pybuffer);
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_probA.rcbuffer->pybuffer);
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_probB.rcbuffer->pybuffer);
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_sample_weight.rcbuffer->pybuffer);
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_support.rcbuffer->pybuffer);
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_sv_coef.rcbuffer->pybuffer);
|
|
__pyx_L2:;
|
|
__Pyx_XDECREF((PyObject *)__pyx_v_dec_values);
|
|
__Pyx_XDECREF((PyObject *)__pyx_v_class_weight_label);
|
|
__Pyx_XGIVEREF(__pyx_r);
|
|
__Pyx_RefNannyFinishContext();
|
|
return __pyx_r;
|
|
}
|
|
|
|
/* "sklearn/svm/libsvm.pyx":461
|
|
*
|
|
*
|
|
* def cross_validation( # <<<<<<<<<<<<<<
|
|
* np.ndarray[np.float64_t, ndim=2, mode='c'] X,
|
|
* np.ndarray[np.float64_t, ndim=1, mode='c'] Y,
|
|
*/
|
|
|
|
/* Python wrapper */
|
|
static PyObject *__pyx_pw_7sklearn_3svm_6libsvm_9cross_validation(PyObject *__pyx_self, PyObject *__pyx_args, PyObject *__pyx_kwds); /*proto*/
|
|
static char __pyx_doc_7sklearn_3svm_6libsvm_8cross_validation[] = "\n Binding of the cross-validation routine (low-level routine)\n\n Parameters\n ----------\n\n X: array-like, dtype=float, size=[n_samples, n_features]\n\n Y: array, dtype=float, size=[n_samples]\n target vector\n\n svm_type : {0, 1, 2, 3, 4}\n Type of SVM: C SVC, nu SVC, one class, epsilon SVR, nu SVR\n\n kernel : {'linear', 'rbf', 'poly', 'sigmoid', 'precomputed'}\n Kernel to use in the model: linear, polynomial, RBF, sigmoid\n or precomputed.\n\n degree : int\n Degree of the polynomial kernel (only relevant if kernel is\n set to polynomial)\n\n gamma : float\n Gamma parameter in RBF kernel (only relevant if kernel is set\n to RBF)\n\n coef0 : float\n Independent parameter in poly/sigmoid kernel.\n\n tol : float\n Stopping criteria.\n\n C : float\n C parameter in C-Support Vector Classification\n\n nu : float\n\n cache_size : float\n\n random_seed : int, optional\n Seed for the random number generator used for probability estimates.\n 0 by default.\n\n Returns\n -------\n target : array, float\n\n ";
|
|
static PyMethodDef __pyx_mdef_7sklearn_3svm_6libsvm_9cross_validation = {__Pyx_NAMESTR("cross_validation"), (PyCFunction)__pyx_pw_7sklearn_3svm_6libsvm_9cross_validation, METH_VARARGS|METH_KEYWORDS, __Pyx_DOCSTR(__pyx_doc_7sklearn_3svm_6libsvm_8cross_validation)};
|
|
static PyObject *__pyx_pw_7sklearn_3svm_6libsvm_9cross_validation(PyObject *__pyx_self, PyObject *__pyx_args, PyObject *__pyx_kwds) {
|
|
PyArrayObject *__pyx_v_X = 0;
|
|
PyArrayObject *__pyx_v_Y = 0;
|
|
int __pyx_v_n_fold;
|
|
PyObject *__pyx_v_svm_type = 0;
|
|
PyObject *__pyx_v_kernel = 0;
|
|
int __pyx_v_degree;
|
|
double __pyx_v_gamma;
|
|
double __pyx_v_coef0;
|
|
double __pyx_v_tol;
|
|
double __pyx_v_C;
|
|
double __pyx_v_nu;
|
|
CYTHON_UNUSED double __pyx_v_epsilon;
|
|
PyArrayObject *__pyx_v_class_weight = 0;
|
|
PyArrayObject *__pyx_v_sample_weight = 0;
|
|
int __pyx_v_shrinking;
|
|
int __pyx_v_probability;
|
|
double __pyx_v_cache_size;
|
|
int __pyx_v_max_iter;
|
|
int __pyx_v_random_seed;
|
|
int __pyx_lineno = 0;
|
|
const char *__pyx_filename = NULL;
|
|
int __pyx_clineno = 0;
|
|
PyObject *__pyx_r = 0;
|
|
__Pyx_RefNannyDeclarations
|
|
__Pyx_RefNannySetupContext("cross_validation (wrapper)", 0);
|
|
{
|
|
static PyObject **__pyx_pyargnames[] = {&__pyx_n_s_X,&__pyx_n_s_Y,&__pyx_n_s_n_fold,&__pyx_n_s_svm_type,&__pyx_n_s_kernel,&__pyx_n_s_degree,&__pyx_n_s_gamma,&__pyx_n_s_coef0,&__pyx_n_s_tol,&__pyx_n_s_C,&__pyx_n_s_nu,&__pyx_n_s_epsilon,&__pyx_n_s_class_weight,&__pyx_n_s_sample_weight,&__pyx_n_s_shrinking,&__pyx_n_s_probability,&__pyx_n_s_cache_size,&__pyx_n_s_max_iter,&__pyx_n_s_random_seed,0};
|
|
PyObject* values[19] = {0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0};
|
|
values[3] = ((PyObject *)__pyx_int_0);
|
|
values[4] = ((PyObject*)__pyx_n_s_rbf);
|
|
values[12] = (PyObject *)__pyx_k__25;
|
|
values[13] = (PyObject *)__pyx_k__26;
|
|
if (unlikely(__pyx_kwds)) {
|
|
Py_ssize_t kw_args;
|
|
const Py_ssize_t pos_args = PyTuple_GET_SIZE(__pyx_args);
|
|
switch (pos_args) {
|
|
case 19: values[18] = PyTuple_GET_ITEM(__pyx_args, 18);
|
|
case 18: values[17] = PyTuple_GET_ITEM(__pyx_args, 17);
|
|
case 17: values[16] = PyTuple_GET_ITEM(__pyx_args, 16);
|
|
case 16: values[15] = PyTuple_GET_ITEM(__pyx_args, 15);
|
|
case 15: values[14] = PyTuple_GET_ITEM(__pyx_args, 14);
|
|
case 14: values[13] = PyTuple_GET_ITEM(__pyx_args, 13);
|
|
case 13: values[12] = PyTuple_GET_ITEM(__pyx_args, 12);
|
|
case 12: values[11] = PyTuple_GET_ITEM(__pyx_args, 11);
|
|
case 11: values[10] = PyTuple_GET_ITEM(__pyx_args, 10);
|
|
case 10: values[9] = PyTuple_GET_ITEM(__pyx_args, 9);
|
|
case 9: values[8] = PyTuple_GET_ITEM(__pyx_args, 8);
|
|
case 8: values[7] = PyTuple_GET_ITEM(__pyx_args, 7);
|
|
case 7: values[6] = PyTuple_GET_ITEM(__pyx_args, 6);
|
|
case 6: values[5] = PyTuple_GET_ITEM(__pyx_args, 5);
|
|
case 5: values[4] = PyTuple_GET_ITEM(__pyx_args, 4);
|
|
case 4: values[3] = PyTuple_GET_ITEM(__pyx_args, 3);
|
|
case 3: values[2] = PyTuple_GET_ITEM(__pyx_args, 2);
|
|
case 2: values[1] = PyTuple_GET_ITEM(__pyx_args, 1);
|
|
case 1: values[0] = PyTuple_GET_ITEM(__pyx_args, 0);
|
|
case 0: break;
|
|
default: goto __pyx_L5_argtuple_error;
|
|
}
|
|
kw_args = PyDict_Size(__pyx_kwds);
|
|
switch (pos_args) {
|
|
case 0:
|
|
if (likely((values[0] = PyDict_GetItem(__pyx_kwds, __pyx_n_s_X)) != 0)) kw_args--;
|
|
else goto __pyx_L5_argtuple_error;
|
|
case 1:
|
|
if (likely((values[1] = PyDict_GetItem(__pyx_kwds, __pyx_n_s_Y)) != 0)) kw_args--;
|
|
else {
|
|
__Pyx_RaiseArgtupleInvalid("cross_validation", 0, 3, 19, 1); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 461; __pyx_clineno = __LINE__; goto __pyx_L3_error;}
|
|
}
|
|
case 2:
|
|
if (likely((values[2] = PyDict_GetItem(__pyx_kwds, __pyx_n_s_n_fold)) != 0)) kw_args--;
|
|
else {
|
|
__Pyx_RaiseArgtupleInvalid("cross_validation", 0, 3, 19, 2); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 461; __pyx_clineno = __LINE__; goto __pyx_L3_error;}
|
|
}
|
|
case 3:
|
|
if (kw_args > 0) {
|
|
PyObject* value = PyDict_GetItem(__pyx_kwds, __pyx_n_s_svm_type);
|
|
if (value) { values[3] = value; kw_args--; }
|
|
}
|
|
case 4:
|
|
if (kw_args > 0) {
|
|
PyObject* value = PyDict_GetItem(__pyx_kwds, __pyx_n_s_kernel);
|
|
if (value) { values[4] = value; kw_args--; }
|
|
}
|
|
case 5:
|
|
if (kw_args > 0) {
|
|
PyObject* value = PyDict_GetItem(__pyx_kwds, __pyx_n_s_degree);
|
|
if (value) { values[5] = value; kw_args--; }
|
|
}
|
|
case 6:
|
|
if (kw_args > 0) {
|
|
PyObject* value = PyDict_GetItem(__pyx_kwds, __pyx_n_s_gamma);
|
|
if (value) { values[6] = value; kw_args--; }
|
|
}
|
|
case 7:
|
|
if (kw_args > 0) {
|
|
PyObject* value = PyDict_GetItem(__pyx_kwds, __pyx_n_s_coef0);
|
|
if (value) { values[7] = value; kw_args--; }
|
|
}
|
|
case 8:
|
|
if (kw_args > 0) {
|
|
PyObject* value = PyDict_GetItem(__pyx_kwds, __pyx_n_s_tol);
|
|
if (value) { values[8] = value; kw_args--; }
|
|
}
|
|
case 9:
|
|
if (kw_args > 0) {
|
|
PyObject* value = PyDict_GetItem(__pyx_kwds, __pyx_n_s_C);
|
|
if (value) { values[9] = value; kw_args--; }
|
|
}
|
|
case 10:
|
|
if (kw_args > 0) {
|
|
PyObject* value = PyDict_GetItem(__pyx_kwds, __pyx_n_s_nu);
|
|
if (value) { values[10] = value; kw_args--; }
|
|
}
|
|
case 11:
|
|
if (kw_args > 0) {
|
|
PyObject* value = PyDict_GetItem(__pyx_kwds, __pyx_n_s_epsilon);
|
|
if (value) { values[11] = value; kw_args--; }
|
|
}
|
|
case 12:
|
|
if (kw_args > 0) {
|
|
PyObject* value = PyDict_GetItem(__pyx_kwds, __pyx_n_s_class_weight);
|
|
if (value) { values[12] = value; kw_args--; }
|
|
}
|
|
case 13:
|
|
if (kw_args > 0) {
|
|
PyObject* value = PyDict_GetItem(__pyx_kwds, __pyx_n_s_sample_weight);
|
|
if (value) { values[13] = value; kw_args--; }
|
|
}
|
|
case 14:
|
|
if (kw_args > 0) {
|
|
PyObject* value = PyDict_GetItem(__pyx_kwds, __pyx_n_s_shrinking);
|
|
if (value) { values[14] = value; kw_args--; }
|
|
}
|
|
case 15:
|
|
if (kw_args > 0) {
|
|
PyObject* value = PyDict_GetItem(__pyx_kwds, __pyx_n_s_probability);
|
|
if (value) { values[15] = value; kw_args--; }
|
|
}
|
|
case 16:
|
|
if (kw_args > 0) {
|
|
PyObject* value = PyDict_GetItem(__pyx_kwds, __pyx_n_s_cache_size);
|
|
if (value) { values[16] = value; kw_args--; }
|
|
}
|
|
case 17:
|
|
if (kw_args > 0) {
|
|
PyObject* value = PyDict_GetItem(__pyx_kwds, __pyx_n_s_max_iter);
|
|
if (value) { values[17] = value; kw_args--; }
|
|
}
|
|
case 18:
|
|
if (kw_args > 0) {
|
|
PyObject* value = PyDict_GetItem(__pyx_kwds, __pyx_n_s_random_seed);
|
|
if (value) { values[18] = value; kw_args--; }
|
|
}
|
|
}
|
|
if (unlikely(kw_args > 0)) {
|
|
if (unlikely(__Pyx_ParseOptionalKeywords(__pyx_kwds, __pyx_pyargnames, 0, values, pos_args, "cross_validation") < 0)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 461; __pyx_clineno = __LINE__; goto __pyx_L3_error;}
|
|
}
|
|
} else {
|
|
switch (PyTuple_GET_SIZE(__pyx_args)) {
|
|
case 19: values[18] = PyTuple_GET_ITEM(__pyx_args, 18);
|
|
case 18: values[17] = PyTuple_GET_ITEM(__pyx_args, 17);
|
|
case 17: values[16] = PyTuple_GET_ITEM(__pyx_args, 16);
|
|
case 16: values[15] = PyTuple_GET_ITEM(__pyx_args, 15);
|
|
case 15: values[14] = PyTuple_GET_ITEM(__pyx_args, 14);
|
|
case 14: values[13] = PyTuple_GET_ITEM(__pyx_args, 13);
|
|
case 13: values[12] = PyTuple_GET_ITEM(__pyx_args, 12);
|
|
case 12: values[11] = PyTuple_GET_ITEM(__pyx_args, 11);
|
|
case 11: values[10] = PyTuple_GET_ITEM(__pyx_args, 10);
|
|
case 10: values[9] = PyTuple_GET_ITEM(__pyx_args, 9);
|
|
case 9: values[8] = PyTuple_GET_ITEM(__pyx_args, 8);
|
|
case 8: values[7] = PyTuple_GET_ITEM(__pyx_args, 7);
|
|
case 7: values[6] = PyTuple_GET_ITEM(__pyx_args, 6);
|
|
case 6: values[5] = PyTuple_GET_ITEM(__pyx_args, 5);
|
|
case 5: values[4] = PyTuple_GET_ITEM(__pyx_args, 4);
|
|
case 4: values[3] = PyTuple_GET_ITEM(__pyx_args, 3);
|
|
case 3: values[2] = PyTuple_GET_ITEM(__pyx_args, 2);
|
|
values[1] = PyTuple_GET_ITEM(__pyx_args, 1);
|
|
values[0] = PyTuple_GET_ITEM(__pyx_args, 0);
|
|
break;
|
|
default: goto __pyx_L5_argtuple_error;
|
|
}
|
|
}
|
|
__pyx_v_X = ((PyArrayObject *)values[0]);
|
|
__pyx_v_Y = ((PyArrayObject *)values[1]);
|
|
__pyx_v_n_fold = __Pyx_PyInt_As_int(values[2]); if (unlikely((__pyx_v_n_fold == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 464; __pyx_clineno = __LINE__; goto __pyx_L3_error;}
|
|
__pyx_v_svm_type = values[3];
|
|
__pyx_v_kernel = ((PyObject*)values[4]);
|
|
if (values[5]) {
|
|
__pyx_v_degree = __Pyx_PyInt_As_int(values[5]); if (unlikely((__pyx_v_degree == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 464; __pyx_clineno = __LINE__; goto __pyx_L3_error;}
|
|
} else {
|
|
__pyx_v_degree = ((int)3);
|
|
}
|
|
if (values[6]) {
|
|
__pyx_v_gamma = __pyx_PyFloat_AsDouble(values[6]); if (unlikely((__pyx_v_gamma == (double)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 465; __pyx_clineno = __LINE__; goto __pyx_L3_error;}
|
|
} else {
|
|
__pyx_v_gamma = ((double)0.1);
|
|
}
|
|
if (values[7]) {
|
|
__pyx_v_coef0 = __pyx_PyFloat_AsDouble(values[7]); if (unlikely((__pyx_v_coef0 == (double)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 465; __pyx_clineno = __LINE__; goto __pyx_L3_error;}
|
|
} else {
|
|
__pyx_v_coef0 = ((double)0.);
|
|
}
|
|
if (values[8]) {
|
|
__pyx_v_tol = __pyx_PyFloat_AsDouble(values[8]); if (unlikely((__pyx_v_tol == (double)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 465; __pyx_clineno = __LINE__; goto __pyx_L3_error;}
|
|
} else {
|
|
__pyx_v_tol = ((double)1e-3);
|
|
}
|
|
if (values[9]) {
|
|
__pyx_v_C = __pyx_PyFloat_AsDouble(values[9]); if (unlikely((__pyx_v_C == (double)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 466; __pyx_clineno = __LINE__; goto __pyx_L3_error;}
|
|
} else {
|
|
__pyx_v_C = ((double)1.);
|
|
}
|
|
if (values[10]) {
|
|
__pyx_v_nu = __pyx_PyFloat_AsDouble(values[10]); if (unlikely((__pyx_v_nu == (double)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 466; __pyx_clineno = __LINE__; goto __pyx_L3_error;}
|
|
} else {
|
|
__pyx_v_nu = ((double)0.5);
|
|
}
|
|
if (values[11]) {
|
|
__pyx_v_epsilon = __pyx_PyFloat_AsDouble(values[11]); if (unlikely((__pyx_v_epsilon == (double)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 466; __pyx_clineno = __LINE__; goto __pyx_L3_error;}
|
|
} else {
|
|
__pyx_v_epsilon = ((double)0.1);
|
|
}
|
|
__pyx_v_class_weight = ((PyArrayObject *)values[12]);
|
|
__pyx_v_sample_weight = ((PyArrayObject *)values[13]);
|
|
if (values[14]) {
|
|
__pyx_v_shrinking = __Pyx_PyInt_As_int(values[14]); if (unlikely((__pyx_v_shrinking == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 471; __pyx_clineno = __LINE__; goto __pyx_L3_error;}
|
|
} else {
|
|
__pyx_v_shrinking = ((int)0);
|
|
}
|
|
if (values[15]) {
|
|
__pyx_v_probability = __Pyx_PyInt_As_int(values[15]); if (unlikely((__pyx_v_probability == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 471; __pyx_clineno = __LINE__; goto __pyx_L3_error;}
|
|
} else {
|
|
__pyx_v_probability = ((int)0);
|
|
}
|
|
if (values[16]) {
|
|
__pyx_v_cache_size = __pyx_PyFloat_AsDouble(values[16]); if (unlikely((__pyx_v_cache_size == (double)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 471; __pyx_clineno = __LINE__; goto __pyx_L3_error;}
|
|
} else {
|
|
__pyx_v_cache_size = ((double)100.);
|
|
}
|
|
if (values[17]) {
|
|
__pyx_v_max_iter = __Pyx_PyInt_As_int(values[17]); if (unlikely((__pyx_v_max_iter == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 472; __pyx_clineno = __LINE__; goto __pyx_L3_error;}
|
|
} else {
|
|
__pyx_v_max_iter = ((int)-1);
|
|
}
|
|
if (values[18]) {
|
|
__pyx_v_random_seed = __Pyx_PyInt_As_int(values[18]); if (unlikely((__pyx_v_random_seed == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 473; __pyx_clineno = __LINE__; goto __pyx_L3_error;}
|
|
} else {
|
|
__pyx_v_random_seed = ((int)0);
|
|
}
|
|
}
|
|
goto __pyx_L4_argument_unpacking_done;
|
|
__pyx_L5_argtuple_error:;
|
|
__Pyx_RaiseArgtupleInvalid("cross_validation", 0, 3, 19, PyTuple_GET_SIZE(__pyx_args)); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 461; __pyx_clineno = __LINE__; goto __pyx_L3_error;}
|
|
__pyx_L3_error:;
|
|
__Pyx_AddTraceback("sklearn.svm.libsvm.cross_validation", __pyx_clineno, __pyx_lineno, __pyx_filename);
|
|
__Pyx_RefNannyFinishContext();
|
|
return NULL;
|
|
__pyx_L4_argument_unpacking_done:;
|
|
if (unlikely(!__Pyx_ArgTypeTest(((PyObject *)__pyx_v_X), __pyx_ptype_5numpy_ndarray, 1, "X", 0))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 462; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
if (unlikely(!__Pyx_ArgTypeTest(((PyObject *)__pyx_v_Y), __pyx_ptype_5numpy_ndarray, 1, "Y", 0))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 463; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
if (unlikely(!__Pyx_ArgTypeTest(((PyObject *)__pyx_v_kernel), (&PyString_Type), 1, "kernel", 1))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 464; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
if (unlikely(!__Pyx_ArgTypeTest(((PyObject *)__pyx_v_class_weight), __pyx_ptype_5numpy_ndarray, 1, "class_weight", 0))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 467; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
if (unlikely(!__Pyx_ArgTypeTest(((PyObject *)__pyx_v_sample_weight), __pyx_ptype_5numpy_ndarray, 1, "sample_weight", 0))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 469; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__pyx_r = __pyx_pf_7sklearn_3svm_6libsvm_8cross_validation(__pyx_self, __pyx_v_X, __pyx_v_Y, __pyx_v_n_fold, __pyx_v_svm_type, __pyx_v_kernel, __pyx_v_degree, __pyx_v_gamma, __pyx_v_coef0, __pyx_v_tol, __pyx_v_C, __pyx_v_nu, __pyx_v_epsilon, __pyx_v_class_weight, __pyx_v_sample_weight, __pyx_v_shrinking, __pyx_v_probability, __pyx_v_cache_size, __pyx_v_max_iter, __pyx_v_random_seed);
|
|
|
|
/* function exit code */
|
|
goto __pyx_L0;
|
|
__pyx_L1_error:;
|
|
__pyx_r = NULL;
|
|
__pyx_L0:;
|
|
__Pyx_RefNannyFinishContext();
|
|
return __pyx_r;
|
|
}
|
|
|
|
static PyObject *__pyx_pf_7sklearn_3svm_6libsvm_8cross_validation(CYTHON_UNUSED PyObject *__pyx_self, PyArrayObject *__pyx_v_X, PyArrayObject *__pyx_v_Y, int __pyx_v_n_fold, PyObject *__pyx_v_svm_type, PyObject *__pyx_v_kernel, int __pyx_v_degree, double __pyx_v_gamma, double __pyx_v_coef0, double __pyx_v_tol, double __pyx_v_C, double __pyx_v_nu, CYTHON_UNUSED double __pyx_v_epsilon, PyArrayObject *__pyx_v_class_weight, PyArrayObject *__pyx_v_sample_weight, int __pyx_v_shrinking, int __pyx_v_probability, double __pyx_v_cache_size, int __pyx_v_max_iter, int __pyx_v_random_seed) {
|
|
struct svm_parameter __pyx_v_param;
|
|
struct svm_problem __pyx_v_problem;
|
|
char const *__pyx_v_error_msg;
|
|
PyObject *__pyx_v_kernel_index = NULL;
|
|
PyArrayObject *__pyx_v_class_weight_label = 0;
|
|
PyArrayObject *__pyx_v_target = 0;
|
|
__Pyx_LocalBuf_ND __pyx_pybuffernd_X;
|
|
__Pyx_Buffer __pyx_pybuffer_X;
|
|
__Pyx_LocalBuf_ND __pyx_pybuffernd_Y;
|
|
__Pyx_Buffer __pyx_pybuffer_Y;
|
|
__Pyx_LocalBuf_ND __pyx_pybuffernd_class_weight;
|
|
__Pyx_Buffer __pyx_pybuffer_class_weight;
|
|
__Pyx_LocalBuf_ND __pyx_pybuffernd_class_weight_label;
|
|
__Pyx_Buffer __pyx_pybuffer_class_weight_label;
|
|
__Pyx_LocalBuf_ND __pyx_pybuffernd_sample_weight;
|
|
__Pyx_Buffer __pyx_pybuffer_sample_weight;
|
|
__Pyx_LocalBuf_ND __pyx_pybuffernd_target;
|
|
__Pyx_Buffer __pyx_pybuffer_target;
|
|
PyObject *__pyx_r = NULL;
|
|
__Pyx_RefNannyDeclarations
|
|
Py_ssize_t __pyx_t_1;
|
|
int __pyx_t_2;
|
|
PyObject *__pyx_t_3 = NULL;
|
|
PyObject *__pyx_t_4 = NULL;
|
|
PyObject *__pyx_t_5 = NULL;
|
|
PyObject *__pyx_t_6 = NULL;
|
|
PyObject *__pyx_t_7 = NULL;
|
|
PyArrayObject *__pyx_t_8 = NULL;
|
|
int __pyx_t_9;
|
|
PyObject *__pyx_t_10 = NULL;
|
|
PyObject *__pyx_t_11 = NULL;
|
|
PyObject *__pyx_t_12 = NULL;
|
|
PyArrayObject *__pyx_t_13 = NULL;
|
|
int __pyx_t_14;
|
|
PyArrayObject *__pyx_t_15 = NULL;
|
|
char const *__pyx_t_16;
|
|
PyObject *__pyx_t_17 = NULL;
|
|
PyObject *__pyx_t_18 = NULL;
|
|
PyObject *__pyx_t_19 = NULL;
|
|
int __pyx_lineno = 0;
|
|
const char *__pyx_filename = NULL;
|
|
int __pyx_clineno = 0;
|
|
__Pyx_RefNannySetupContext("cross_validation", 0);
|
|
__Pyx_INCREF((PyObject *)__pyx_v_sample_weight);
|
|
__pyx_pybuffer_class_weight_label.pybuffer.buf = NULL;
|
|
__pyx_pybuffer_class_weight_label.refcount = 0;
|
|
__pyx_pybuffernd_class_weight_label.data = NULL;
|
|
__pyx_pybuffernd_class_weight_label.rcbuffer = &__pyx_pybuffer_class_weight_label;
|
|
__pyx_pybuffer_target.pybuffer.buf = NULL;
|
|
__pyx_pybuffer_target.refcount = 0;
|
|
__pyx_pybuffernd_target.data = NULL;
|
|
__pyx_pybuffernd_target.rcbuffer = &__pyx_pybuffer_target;
|
|
__pyx_pybuffer_X.pybuffer.buf = NULL;
|
|
__pyx_pybuffer_X.refcount = 0;
|
|
__pyx_pybuffernd_X.data = NULL;
|
|
__pyx_pybuffernd_X.rcbuffer = &__pyx_pybuffer_X;
|
|
__pyx_pybuffer_Y.pybuffer.buf = NULL;
|
|
__pyx_pybuffer_Y.refcount = 0;
|
|
__pyx_pybuffernd_Y.data = NULL;
|
|
__pyx_pybuffernd_Y.rcbuffer = &__pyx_pybuffer_Y;
|
|
__pyx_pybuffer_class_weight.pybuffer.buf = NULL;
|
|
__pyx_pybuffer_class_weight.refcount = 0;
|
|
__pyx_pybuffernd_class_weight.data = NULL;
|
|
__pyx_pybuffernd_class_weight.rcbuffer = &__pyx_pybuffer_class_weight;
|
|
__pyx_pybuffer_sample_weight.pybuffer.buf = NULL;
|
|
__pyx_pybuffer_sample_weight.refcount = 0;
|
|
__pyx_pybuffernd_sample_weight.data = NULL;
|
|
__pyx_pybuffernd_sample_weight.rcbuffer = &__pyx_pybuffer_sample_weight;
|
|
{
|
|
__Pyx_BufFmt_StackElem __pyx_stack[1];
|
|
if (unlikely(__Pyx_GetBufferAndValidate(&__pyx_pybuffernd_X.rcbuffer->pybuffer, (PyObject*)__pyx_v_X, &__Pyx_TypeInfo_nn___pyx_t_5numpy_float64_t, PyBUF_FORMAT| PyBUF_C_CONTIGUOUS, 2, 0, __pyx_stack) == -1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 461; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
}
|
|
__pyx_pybuffernd_X.diminfo[0].strides = __pyx_pybuffernd_X.rcbuffer->pybuffer.strides[0]; __pyx_pybuffernd_X.diminfo[0].shape = __pyx_pybuffernd_X.rcbuffer->pybuffer.shape[0]; __pyx_pybuffernd_X.diminfo[1].strides = __pyx_pybuffernd_X.rcbuffer->pybuffer.strides[1]; __pyx_pybuffernd_X.diminfo[1].shape = __pyx_pybuffernd_X.rcbuffer->pybuffer.shape[1];
|
|
{
|
|
__Pyx_BufFmt_StackElem __pyx_stack[1];
|
|
if (unlikely(__Pyx_GetBufferAndValidate(&__pyx_pybuffernd_Y.rcbuffer->pybuffer, (PyObject*)__pyx_v_Y, &__Pyx_TypeInfo_nn___pyx_t_5numpy_float64_t, PyBUF_FORMAT| PyBUF_C_CONTIGUOUS, 1, 0, __pyx_stack) == -1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 461; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
}
|
|
__pyx_pybuffernd_Y.diminfo[0].strides = __pyx_pybuffernd_Y.rcbuffer->pybuffer.strides[0]; __pyx_pybuffernd_Y.diminfo[0].shape = __pyx_pybuffernd_Y.rcbuffer->pybuffer.shape[0];
|
|
{
|
|
__Pyx_BufFmt_StackElem __pyx_stack[1];
|
|
if (unlikely(__Pyx_GetBufferAndValidate(&__pyx_pybuffernd_class_weight.rcbuffer->pybuffer, (PyObject*)__pyx_v_class_weight, &__Pyx_TypeInfo_nn___pyx_t_5numpy_float64_t, PyBUF_FORMAT| PyBUF_C_CONTIGUOUS, 1, 0, __pyx_stack) == -1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 461; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
}
|
|
__pyx_pybuffernd_class_weight.diminfo[0].strides = __pyx_pybuffernd_class_weight.rcbuffer->pybuffer.strides[0]; __pyx_pybuffernd_class_weight.diminfo[0].shape = __pyx_pybuffernd_class_weight.rcbuffer->pybuffer.shape[0];
|
|
{
|
|
__Pyx_BufFmt_StackElem __pyx_stack[1];
|
|
if (unlikely(__Pyx_GetBufferAndValidate(&__pyx_pybuffernd_sample_weight.rcbuffer->pybuffer, (PyObject*)__pyx_v_sample_weight, &__Pyx_TypeInfo_nn___pyx_t_5numpy_float64_t, PyBUF_FORMAT| PyBUF_C_CONTIGUOUS, 1, 0, __pyx_stack) == -1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 461; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
}
|
|
__pyx_pybuffernd_sample_weight.diminfo[0].strides = __pyx_pybuffernd_sample_weight.rcbuffer->pybuffer.strides[0]; __pyx_pybuffernd_sample_weight.diminfo[0].shape = __pyx_pybuffernd_sample_weight.rcbuffer->pybuffer.shape[0];
|
|
|
|
/* "sklearn/svm/libsvm.pyx":530
|
|
* cdef np.npy_intp nr
|
|
*
|
|
* if len(sample_weight) == 0: # <<<<<<<<<<<<<<
|
|
* sample_weight = np.ones(X.shape[0], dtype=np.float64)
|
|
* else:
|
|
*/
|
|
__pyx_t_1 = PyObject_Length(((PyObject *)__pyx_v_sample_weight)); if (unlikely(__pyx_t_1 == -1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 530; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__pyx_t_2 = ((__pyx_t_1 == 0) != 0);
|
|
if (__pyx_t_2) {
|
|
|
|
/* "sklearn/svm/libsvm.pyx":531
|
|
*
|
|
* if len(sample_weight) == 0:
|
|
* sample_weight = np.ones(X.shape[0], dtype=np.float64) # <<<<<<<<<<<<<<
|
|
* else:
|
|
* assert sample_weight.shape[0] == X.shape[0], \
|
|
*/
|
|
__pyx_t_3 = __Pyx_GetModuleGlobalName(__pyx_n_s_np); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 531; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_3);
|
|
__pyx_t_4 = __Pyx_PyObject_GetAttrStr(__pyx_t_3, __pyx_n_s_ones); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 531; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_4);
|
|
__Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0;
|
|
__pyx_t_3 = __Pyx_PyInt_From_Py_intptr_t((__pyx_v_X->dimensions[0])); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 531; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_3);
|
|
__pyx_t_5 = PyTuple_New(1); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 531; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_5);
|
|
PyTuple_SET_ITEM(__pyx_t_5, 0, __pyx_t_3);
|
|
__Pyx_GIVEREF(__pyx_t_3);
|
|
__pyx_t_3 = 0;
|
|
__pyx_t_3 = PyDict_New(); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 531; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_3);
|
|
__pyx_t_6 = __Pyx_GetModuleGlobalName(__pyx_n_s_np); if (unlikely(!__pyx_t_6)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 531; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_6);
|
|
__pyx_t_7 = __Pyx_PyObject_GetAttrStr(__pyx_t_6, __pyx_n_s_float64); if (unlikely(!__pyx_t_7)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 531; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_7);
|
|
__Pyx_DECREF(__pyx_t_6); __pyx_t_6 = 0;
|
|
if (PyDict_SetItem(__pyx_t_3, __pyx_n_s_dtype, __pyx_t_7) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 531; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_DECREF(__pyx_t_7); __pyx_t_7 = 0;
|
|
__pyx_t_7 = __Pyx_PyObject_Call(__pyx_t_4, __pyx_t_5, __pyx_t_3); if (unlikely(!__pyx_t_7)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 531; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_7);
|
|
__Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0;
|
|
__Pyx_DECREF(__pyx_t_5); __pyx_t_5 = 0;
|
|
__Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0;
|
|
if (!(likely(((__pyx_t_7) == Py_None) || likely(__Pyx_TypeTest(__pyx_t_7, __pyx_ptype_5numpy_ndarray))))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 531; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__pyx_t_8 = ((PyArrayObject *)__pyx_t_7);
|
|
{
|
|
__Pyx_BufFmt_StackElem __pyx_stack[1];
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_sample_weight.rcbuffer->pybuffer);
|
|
__pyx_t_9 = __Pyx_GetBufferAndValidate(&__pyx_pybuffernd_sample_weight.rcbuffer->pybuffer, (PyObject*)__pyx_t_8, &__Pyx_TypeInfo_nn___pyx_t_5numpy_float64_t, PyBUF_FORMAT| PyBUF_C_CONTIGUOUS, 1, 0, __pyx_stack);
|
|
if (unlikely(__pyx_t_9 < 0)) {
|
|
PyErr_Fetch(&__pyx_t_10, &__pyx_t_11, &__pyx_t_12);
|
|
if (unlikely(__Pyx_GetBufferAndValidate(&__pyx_pybuffernd_sample_weight.rcbuffer->pybuffer, (PyObject*)__pyx_v_sample_weight, &__Pyx_TypeInfo_nn___pyx_t_5numpy_float64_t, PyBUF_FORMAT| PyBUF_C_CONTIGUOUS, 1, 0, __pyx_stack) == -1)) {
|
|
Py_XDECREF(__pyx_t_10); Py_XDECREF(__pyx_t_11); Py_XDECREF(__pyx_t_12);
|
|
__Pyx_RaiseBufferFallbackError();
|
|
} else {
|
|
PyErr_Restore(__pyx_t_10, __pyx_t_11, __pyx_t_12);
|
|
}
|
|
}
|
|
__pyx_pybuffernd_sample_weight.diminfo[0].strides = __pyx_pybuffernd_sample_weight.rcbuffer->pybuffer.strides[0]; __pyx_pybuffernd_sample_weight.diminfo[0].shape = __pyx_pybuffernd_sample_weight.rcbuffer->pybuffer.shape[0];
|
|
if (unlikely(__pyx_t_9 < 0)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 531; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
}
|
|
__pyx_t_8 = 0;
|
|
__Pyx_DECREF_SET(__pyx_v_sample_weight, ((PyArrayObject *)__pyx_t_7));
|
|
__pyx_t_7 = 0;
|
|
goto __pyx_L3;
|
|
}
|
|
/*else*/ {
|
|
|
|
/* "sklearn/svm/libsvm.pyx":533
|
|
* sample_weight = np.ones(X.shape[0], dtype=np.float64)
|
|
* else:
|
|
* assert sample_weight.shape[0] == X.shape[0], \ # <<<<<<<<<<<<<<
|
|
* "sample_weight and X have incompatible shapes: " + \
|
|
* "sample_weight has %s samples while X has %s" % \
|
|
*/
|
|
#ifndef CYTHON_WITHOUT_ASSERTIONS
|
|
if (unlikely(!Py_OptimizeFlag)) {
|
|
if (unlikely(!(((__pyx_v_sample_weight->dimensions[0]) == (__pyx_v_X->dimensions[0])) != 0))) {
|
|
|
|
/* "sklearn/svm/libsvm.pyx":536
|
|
* "sample_weight and X have incompatible shapes: " + \
|
|
* "sample_weight has %s samples while X has %s" % \
|
|
* (sample_weight.shape[0], X.shape[0]) # <<<<<<<<<<<<<<
|
|
*
|
|
* if X.shape[0] < n_fold:
|
|
*/
|
|
__pyx_t_7 = __Pyx_PyInt_From_Py_intptr_t((__pyx_v_sample_weight->dimensions[0])); if (unlikely(!__pyx_t_7)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 536; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_7);
|
|
__pyx_t_3 = __Pyx_PyInt_From_Py_intptr_t((__pyx_v_X->dimensions[0])); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 536; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_3);
|
|
__pyx_t_5 = PyTuple_New(2); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 536; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_5);
|
|
PyTuple_SET_ITEM(__pyx_t_5, 0, __pyx_t_7);
|
|
__Pyx_GIVEREF(__pyx_t_7);
|
|
PyTuple_SET_ITEM(__pyx_t_5, 1, __pyx_t_3);
|
|
__Pyx_GIVEREF(__pyx_t_3);
|
|
__pyx_t_7 = 0;
|
|
__pyx_t_3 = 0;
|
|
|
|
/* "sklearn/svm/libsvm.pyx":535
|
|
* assert sample_weight.shape[0] == X.shape[0], \
|
|
* "sample_weight and X have incompatible shapes: " + \
|
|
* "sample_weight has %s samples while X has %s" % \ # <<<<<<<<<<<<<<
|
|
* (sample_weight.shape[0], X.shape[0])
|
|
*
|
|
*/
|
|
__pyx_t_3 = __Pyx_PyString_Format(__pyx_kp_s_sample_weight_has_s_samples_whil, __pyx_t_5); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 535; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_3);
|
|
__Pyx_DECREF(__pyx_t_5); __pyx_t_5 = 0;
|
|
|
|
/* "sklearn/svm/libsvm.pyx":534
|
|
* else:
|
|
* assert sample_weight.shape[0] == X.shape[0], \
|
|
* "sample_weight and X have incompatible shapes: " + \ # <<<<<<<<<<<<<<
|
|
* "sample_weight has %s samples while X has %s" % \
|
|
* (sample_weight.shape[0], X.shape[0])
|
|
*/
|
|
__pyx_t_5 = PyNumber_Add(__pyx_kp_s_sample_weight_and_X_have_incompa, __pyx_t_3); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 534; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_5);
|
|
__Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0;
|
|
PyErr_SetObject(PyExc_AssertionError, __pyx_t_5);
|
|
__Pyx_DECREF(__pyx_t_5); __pyx_t_5 = 0;
|
|
{__pyx_filename = __pyx_f[0]; __pyx_lineno = 533; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
}
|
|
}
|
|
#endif
|
|
}
|
|
__pyx_L3:;
|
|
|
|
/* "sklearn/svm/libsvm.pyx":538
|
|
* (sample_weight.shape[0], X.shape[0])
|
|
*
|
|
* if X.shape[0] < n_fold: # <<<<<<<<<<<<<<
|
|
* raise ValueError("Number of samples is less than number of folds")
|
|
*
|
|
*/
|
|
__pyx_t_2 = (((__pyx_v_X->dimensions[0]) < __pyx_v_n_fold) != 0);
|
|
if (__pyx_t_2) {
|
|
|
|
/* "sklearn/svm/libsvm.pyx":539
|
|
*
|
|
* if X.shape[0] < n_fold:
|
|
* raise ValueError("Number of samples is less than number of folds") # <<<<<<<<<<<<<<
|
|
*
|
|
* # set problem
|
|
*/
|
|
__pyx_t_5 = __Pyx_PyObject_Call(__pyx_builtin_ValueError, __pyx_tuple__27, NULL); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 539; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_5);
|
|
__Pyx_Raise(__pyx_t_5, 0, 0, 0);
|
|
__Pyx_DECREF(__pyx_t_5); __pyx_t_5 = 0;
|
|
{__pyx_filename = __pyx_f[0]; __pyx_lineno = 539; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
}
|
|
|
|
/* "sklearn/svm/libsvm.pyx":542
|
|
*
|
|
* # set problem
|
|
* kernel_index = LIBSVM_KERNEL_TYPES.index(kernel) # <<<<<<<<<<<<<<
|
|
* set_problem(
|
|
* &problem, X.data, Y.data, sample_weight.data, X.shape, kernel_index)
|
|
*/
|
|
__pyx_t_5 = __Pyx_GetModuleGlobalName(__pyx_n_s_LIBSVM_KERNEL_TYPES); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 542; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_5);
|
|
__pyx_t_3 = __Pyx_PyObject_GetAttrStr(__pyx_t_5, __pyx_n_s_index); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 542; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_3);
|
|
__Pyx_DECREF(__pyx_t_5); __pyx_t_5 = 0;
|
|
__pyx_t_5 = PyTuple_New(1); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 542; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_5);
|
|
__Pyx_INCREF(__pyx_v_kernel);
|
|
PyTuple_SET_ITEM(__pyx_t_5, 0, __pyx_v_kernel);
|
|
__Pyx_GIVEREF(__pyx_v_kernel);
|
|
__pyx_t_7 = __Pyx_PyObject_Call(__pyx_t_3, __pyx_t_5, NULL); if (unlikely(!__pyx_t_7)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 542; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_7);
|
|
__Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0;
|
|
__Pyx_DECREF(__pyx_t_5); __pyx_t_5 = 0;
|
|
__pyx_v_kernel_index = __pyx_t_7;
|
|
__pyx_t_7 = 0;
|
|
|
|
/* "sklearn/svm/libsvm.pyx":544
|
|
* kernel_index = LIBSVM_KERNEL_TYPES.index(kernel)
|
|
* set_problem(
|
|
* &problem, X.data, Y.data, sample_weight.data, X.shape, kernel_index) # <<<<<<<<<<<<<<
|
|
* if problem.x == NULL:
|
|
* raise MemoryError("Seems we've run out of memory")
|
|
*/
|
|
__pyx_t_9 = __Pyx_PyInt_As_int(__pyx_v_kernel_index); if (unlikely((__pyx_t_9 == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 544; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
|
|
/* "sklearn/svm/libsvm.pyx":543
|
|
* # set problem
|
|
* kernel_index = LIBSVM_KERNEL_TYPES.index(kernel)
|
|
* set_problem( # <<<<<<<<<<<<<<
|
|
* &problem, X.data, Y.data, sample_weight.data, X.shape, kernel_index)
|
|
* if problem.x == NULL:
|
|
*/
|
|
set_problem((&__pyx_v_problem), __pyx_v_X->data, __pyx_v_Y->data, __pyx_v_sample_weight->data, __pyx_v_X->dimensions, __pyx_t_9);
|
|
|
|
/* "sklearn/svm/libsvm.pyx":545
|
|
* set_problem(
|
|
* &problem, X.data, Y.data, sample_weight.data, X.shape, kernel_index)
|
|
* if problem.x == NULL: # <<<<<<<<<<<<<<
|
|
* raise MemoryError("Seems we've run out of memory")
|
|
* cdef np.ndarray[np.int32_t, ndim=1, mode='c'] \
|
|
*/
|
|
__pyx_t_2 = ((__pyx_v_problem.x == NULL) != 0);
|
|
if (__pyx_t_2) {
|
|
|
|
/* "sklearn/svm/libsvm.pyx":546
|
|
* &problem, X.data, Y.data, sample_weight.data, X.shape, kernel_index)
|
|
* if problem.x == NULL:
|
|
* raise MemoryError("Seems we've run out of memory") # <<<<<<<<<<<<<<
|
|
* cdef np.ndarray[np.int32_t, ndim=1, mode='c'] \
|
|
* class_weight_label = np.arange(class_weight.shape[0], dtype=np.int32)
|
|
*/
|
|
__pyx_t_7 = __Pyx_PyObject_Call(__pyx_builtin_MemoryError, __pyx_tuple__28, NULL); if (unlikely(!__pyx_t_7)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 546; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_7);
|
|
__Pyx_Raise(__pyx_t_7, 0, 0, 0);
|
|
__Pyx_DECREF(__pyx_t_7); __pyx_t_7 = 0;
|
|
{__pyx_filename = __pyx_f[0]; __pyx_lineno = 546; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
}
|
|
|
|
/* "sklearn/svm/libsvm.pyx":548
|
|
* raise MemoryError("Seems we've run out of memory")
|
|
* cdef np.ndarray[np.int32_t, ndim=1, mode='c'] \
|
|
* class_weight_label = np.arange(class_weight.shape[0], dtype=np.int32) # <<<<<<<<<<<<<<
|
|
*
|
|
* # set parameters
|
|
*/
|
|
__pyx_t_7 = __Pyx_GetModuleGlobalName(__pyx_n_s_np); if (unlikely(!__pyx_t_7)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 548; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_7);
|
|
__pyx_t_5 = __Pyx_PyObject_GetAttrStr(__pyx_t_7, __pyx_n_s_arange); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 548; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_5);
|
|
__Pyx_DECREF(__pyx_t_7); __pyx_t_7 = 0;
|
|
__pyx_t_7 = __Pyx_PyInt_From_Py_intptr_t((__pyx_v_class_weight->dimensions[0])); if (unlikely(!__pyx_t_7)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 548; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_7);
|
|
__pyx_t_3 = PyTuple_New(1); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 548; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_3);
|
|
PyTuple_SET_ITEM(__pyx_t_3, 0, __pyx_t_7);
|
|
__Pyx_GIVEREF(__pyx_t_7);
|
|
__pyx_t_7 = 0;
|
|
__pyx_t_7 = PyDict_New(); if (unlikely(!__pyx_t_7)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 548; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_7);
|
|
__pyx_t_4 = __Pyx_GetModuleGlobalName(__pyx_n_s_np); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 548; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_4);
|
|
__pyx_t_6 = __Pyx_PyObject_GetAttrStr(__pyx_t_4, __pyx_n_s_int32); if (unlikely(!__pyx_t_6)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 548; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_6);
|
|
__Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0;
|
|
if (PyDict_SetItem(__pyx_t_7, __pyx_n_s_dtype, __pyx_t_6) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 548; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_DECREF(__pyx_t_6); __pyx_t_6 = 0;
|
|
__pyx_t_6 = __Pyx_PyObject_Call(__pyx_t_5, __pyx_t_3, __pyx_t_7); if (unlikely(!__pyx_t_6)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 548; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_6);
|
|
__Pyx_DECREF(__pyx_t_5); __pyx_t_5 = 0;
|
|
__Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0;
|
|
__Pyx_DECREF(__pyx_t_7); __pyx_t_7 = 0;
|
|
if (!(likely(((__pyx_t_6) == Py_None) || likely(__Pyx_TypeTest(__pyx_t_6, __pyx_ptype_5numpy_ndarray))))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 548; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__pyx_t_13 = ((PyArrayObject *)__pyx_t_6);
|
|
{
|
|
__Pyx_BufFmt_StackElem __pyx_stack[1];
|
|
if (unlikely(__Pyx_GetBufferAndValidate(&__pyx_pybuffernd_class_weight_label.rcbuffer->pybuffer, (PyObject*)__pyx_t_13, &__Pyx_TypeInfo_nn___pyx_t_5numpy_int32_t, PyBUF_FORMAT| PyBUF_C_CONTIGUOUS, 1, 0, __pyx_stack) == -1)) {
|
|
__pyx_v_class_weight_label = ((PyArrayObject *)Py_None); __Pyx_INCREF(Py_None); __pyx_pybuffernd_class_weight_label.rcbuffer->pybuffer.buf = NULL;
|
|
{__pyx_filename = __pyx_f[0]; __pyx_lineno = 547; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
} else {__pyx_pybuffernd_class_weight_label.diminfo[0].strides = __pyx_pybuffernd_class_weight_label.rcbuffer->pybuffer.strides[0]; __pyx_pybuffernd_class_weight_label.diminfo[0].shape = __pyx_pybuffernd_class_weight_label.rcbuffer->pybuffer.shape[0];
|
|
}
|
|
}
|
|
__pyx_t_13 = 0;
|
|
__pyx_v_class_weight_label = ((PyArrayObject *)__pyx_t_6);
|
|
__pyx_t_6 = 0;
|
|
|
|
/* "sklearn/svm/libsvm.pyx":552
|
|
* # set parameters
|
|
* set_parameter(
|
|
* ¶m, svm_type, kernel_index, degree, gamma, coef0, nu, cache_size, # <<<<<<<<<<<<<<
|
|
* C, tol, tol, shrinking, probability, <int>
|
|
* class_weight.shape[0], class_weight_label.data,
|
|
*/
|
|
__pyx_t_9 = __Pyx_PyInt_As_int(__pyx_v_svm_type); if (unlikely((__pyx_t_9 == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 552; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__pyx_t_14 = __Pyx_PyInt_As_int(__pyx_v_kernel_index); if (unlikely((__pyx_t_14 == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 552; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
|
|
/* "sklearn/svm/libsvm.pyx":551
|
|
*
|
|
* # set parameters
|
|
* set_parameter( # <<<<<<<<<<<<<<
|
|
* ¶m, svm_type, kernel_index, degree, gamma, coef0, nu, cache_size,
|
|
* C, tol, tol, shrinking, probability, <int>
|
|
*/
|
|
set_parameter((&__pyx_v_param), __pyx_t_9, __pyx_t_14, __pyx_v_degree, __pyx_v_gamma, __pyx_v_coef0, __pyx_v_nu, __pyx_v_cache_size, __pyx_v_C, __pyx_v_tol, __pyx_v_tol, __pyx_v_shrinking, __pyx_v_probability, ((int)(__pyx_v_class_weight->dimensions[0])), __pyx_v_class_weight_label->data, __pyx_v_class_weight->data, __pyx_v_max_iter, __pyx_v_random_seed);
|
|
|
|
/* "sklearn/svm/libsvm.pyx":557
|
|
* class_weight.data, max_iter, random_seed)
|
|
*
|
|
* error_msg = svm_check_parameter(&problem, ¶m); # <<<<<<<<<<<<<<
|
|
* if error_msg:
|
|
* raise ValueError(error_msg)
|
|
*/
|
|
__pyx_v_error_msg = svm_check_parameter((&__pyx_v_problem), (&__pyx_v_param));
|
|
|
|
/* "sklearn/svm/libsvm.pyx":558
|
|
*
|
|
* error_msg = svm_check_parameter(&problem, ¶m);
|
|
* if error_msg: # <<<<<<<<<<<<<<
|
|
* raise ValueError(error_msg)
|
|
*
|
|
*/
|
|
__pyx_t_2 = (__pyx_v_error_msg != 0);
|
|
if (__pyx_t_2) {
|
|
|
|
/* "sklearn/svm/libsvm.pyx":559
|
|
* error_msg = svm_check_parameter(&problem, ¶m);
|
|
* if error_msg:
|
|
* raise ValueError(error_msg) # <<<<<<<<<<<<<<
|
|
*
|
|
* cdef np.ndarray[np.float64_t, ndim=1, mode='c'] target
|
|
*/
|
|
__pyx_t_6 = __Pyx_PyBytes_FromString(__pyx_v_error_msg); if (unlikely(!__pyx_t_6)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 559; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_6);
|
|
__pyx_t_7 = PyTuple_New(1); if (unlikely(!__pyx_t_7)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 559; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_7);
|
|
PyTuple_SET_ITEM(__pyx_t_7, 0, __pyx_t_6);
|
|
__Pyx_GIVEREF(__pyx_t_6);
|
|
__pyx_t_6 = 0;
|
|
__pyx_t_6 = __Pyx_PyObject_Call(__pyx_builtin_ValueError, __pyx_t_7, NULL); if (unlikely(!__pyx_t_6)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 559; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_6);
|
|
__Pyx_DECREF(__pyx_t_7); __pyx_t_7 = 0;
|
|
__Pyx_Raise(__pyx_t_6, 0, 0, 0);
|
|
__Pyx_DECREF(__pyx_t_6); __pyx_t_6 = 0;
|
|
{__pyx_filename = __pyx_f[0]; __pyx_lineno = 559; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
}
|
|
|
|
/* "sklearn/svm/libsvm.pyx":562
|
|
*
|
|
* cdef np.ndarray[np.float64_t, ndim=1, mode='c'] target
|
|
* try: # <<<<<<<<<<<<<<
|
|
* target = np.empty((X.shape[0]), dtype=np.float64)
|
|
* with nogil:
|
|
*/
|
|
/*try:*/ {
|
|
|
|
/* "sklearn/svm/libsvm.pyx":563
|
|
* cdef np.ndarray[np.float64_t, ndim=1, mode='c'] target
|
|
* try:
|
|
* target = np.empty((X.shape[0]), dtype=np.float64) # <<<<<<<<<<<<<<
|
|
* with nogil:
|
|
* svm_cross_validation(&problem, ¶m, n_fold, <double *> target.data)
|
|
*/
|
|
__pyx_t_6 = __Pyx_GetModuleGlobalName(__pyx_n_s_np); if (unlikely(!__pyx_t_6)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 563; __pyx_clineno = __LINE__; goto __pyx_L8_error;}
|
|
__Pyx_GOTREF(__pyx_t_6);
|
|
__pyx_t_7 = __Pyx_PyObject_GetAttrStr(__pyx_t_6, __pyx_n_s_empty); if (unlikely(!__pyx_t_7)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 563; __pyx_clineno = __LINE__; goto __pyx_L8_error;}
|
|
__Pyx_GOTREF(__pyx_t_7);
|
|
__Pyx_DECREF(__pyx_t_6); __pyx_t_6 = 0;
|
|
__pyx_t_6 = __Pyx_PyInt_From_Py_intptr_t((__pyx_v_X->dimensions[0])); if (unlikely(!__pyx_t_6)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 563; __pyx_clineno = __LINE__; goto __pyx_L8_error;}
|
|
__Pyx_GOTREF(__pyx_t_6);
|
|
__pyx_t_3 = PyTuple_New(1); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 563; __pyx_clineno = __LINE__; goto __pyx_L8_error;}
|
|
__Pyx_GOTREF(__pyx_t_3);
|
|
PyTuple_SET_ITEM(__pyx_t_3, 0, __pyx_t_6);
|
|
__Pyx_GIVEREF(__pyx_t_6);
|
|
__pyx_t_6 = 0;
|
|
__pyx_t_6 = PyDict_New(); if (unlikely(!__pyx_t_6)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 563; __pyx_clineno = __LINE__; goto __pyx_L8_error;}
|
|
__Pyx_GOTREF(__pyx_t_6);
|
|
__pyx_t_5 = __Pyx_GetModuleGlobalName(__pyx_n_s_np); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 563; __pyx_clineno = __LINE__; goto __pyx_L8_error;}
|
|
__Pyx_GOTREF(__pyx_t_5);
|
|
__pyx_t_4 = __Pyx_PyObject_GetAttrStr(__pyx_t_5, __pyx_n_s_float64); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 563; __pyx_clineno = __LINE__; goto __pyx_L8_error;}
|
|
__Pyx_GOTREF(__pyx_t_4);
|
|
__Pyx_DECREF(__pyx_t_5); __pyx_t_5 = 0;
|
|
if (PyDict_SetItem(__pyx_t_6, __pyx_n_s_dtype, __pyx_t_4) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 563; __pyx_clineno = __LINE__; goto __pyx_L8_error;}
|
|
__Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0;
|
|
__pyx_t_4 = __Pyx_PyObject_Call(__pyx_t_7, __pyx_t_3, __pyx_t_6); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 563; __pyx_clineno = __LINE__; goto __pyx_L8_error;}
|
|
__Pyx_GOTREF(__pyx_t_4);
|
|
__Pyx_DECREF(__pyx_t_7); __pyx_t_7 = 0;
|
|
__Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0;
|
|
__Pyx_DECREF(__pyx_t_6); __pyx_t_6 = 0;
|
|
if (!(likely(((__pyx_t_4) == Py_None) || likely(__Pyx_TypeTest(__pyx_t_4, __pyx_ptype_5numpy_ndarray))))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 563; __pyx_clineno = __LINE__; goto __pyx_L8_error;}
|
|
__pyx_t_15 = ((PyArrayObject *)__pyx_t_4);
|
|
{
|
|
__Pyx_BufFmt_StackElem __pyx_stack[1];
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_target.rcbuffer->pybuffer);
|
|
__pyx_t_14 = __Pyx_GetBufferAndValidate(&__pyx_pybuffernd_target.rcbuffer->pybuffer, (PyObject*)__pyx_t_15, &__Pyx_TypeInfo_nn___pyx_t_5numpy_float64_t, PyBUF_FORMAT| PyBUF_C_CONTIGUOUS, 1, 0, __pyx_stack);
|
|
if (unlikely(__pyx_t_14 < 0)) {
|
|
PyErr_Fetch(&__pyx_t_12, &__pyx_t_11, &__pyx_t_10);
|
|
if (unlikely(__Pyx_GetBufferAndValidate(&__pyx_pybuffernd_target.rcbuffer->pybuffer, (PyObject*)__pyx_v_target, &__Pyx_TypeInfo_nn___pyx_t_5numpy_float64_t, PyBUF_FORMAT| PyBUF_C_CONTIGUOUS, 1, 0, __pyx_stack) == -1)) {
|
|
Py_XDECREF(__pyx_t_12); Py_XDECREF(__pyx_t_11); Py_XDECREF(__pyx_t_10);
|
|
__Pyx_RaiseBufferFallbackError();
|
|
} else {
|
|
PyErr_Restore(__pyx_t_12, __pyx_t_11, __pyx_t_10);
|
|
}
|
|
}
|
|
__pyx_pybuffernd_target.diminfo[0].strides = __pyx_pybuffernd_target.rcbuffer->pybuffer.strides[0]; __pyx_pybuffernd_target.diminfo[0].shape = __pyx_pybuffernd_target.rcbuffer->pybuffer.shape[0];
|
|
if (unlikely(__pyx_t_14 < 0)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 563; __pyx_clineno = __LINE__; goto __pyx_L8_error;}
|
|
}
|
|
__pyx_t_15 = 0;
|
|
__pyx_v_target = ((PyArrayObject *)__pyx_t_4);
|
|
__pyx_t_4 = 0;
|
|
|
|
/* "sklearn/svm/libsvm.pyx":564
|
|
* try:
|
|
* target = np.empty((X.shape[0]), dtype=np.float64)
|
|
* with nogil: # <<<<<<<<<<<<<<
|
|
* svm_cross_validation(&problem, ¶m, n_fold, <double *> target.data)
|
|
* finally:
|
|
*/
|
|
{
|
|
#ifdef WITH_THREAD
|
|
PyThreadState *_save;
|
|
Py_UNBLOCK_THREADS
|
|
#endif
|
|
/*try:*/ {
|
|
|
|
/* "sklearn/svm/libsvm.pyx":565
|
|
* target = np.empty((X.shape[0]), dtype=np.float64)
|
|
* with nogil:
|
|
* svm_cross_validation(&problem, ¶m, n_fold, <double *> target.data) # <<<<<<<<<<<<<<
|
|
* finally:
|
|
* free(problem.x)
|
|
*/
|
|
svm_cross_validation((&__pyx_v_problem), (&__pyx_v_param), __pyx_v_n_fold, ((double *)__pyx_v_target->data));
|
|
}
|
|
|
|
/* "sklearn/svm/libsvm.pyx":564
|
|
* try:
|
|
* target = np.empty((X.shape[0]), dtype=np.float64)
|
|
* with nogil: # <<<<<<<<<<<<<<
|
|
* svm_cross_validation(&problem, ¶m, n_fold, <double *> target.data)
|
|
* finally:
|
|
*/
|
|
/*finally:*/ {
|
|
/*normal exit:*/{
|
|
#ifdef WITH_THREAD
|
|
Py_BLOCK_THREADS
|
|
#endif
|
|
goto __pyx_L12;
|
|
}
|
|
__pyx_L12:;
|
|
}
|
|
}
|
|
}
|
|
|
|
/* "sklearn/svm/libsvm.pyx":567
|
|
* svm_cross_validation(&problem, ¶m, n_fold, <double *> target.data)
|
|
* finally:
|
|
* free(problem.x) # <<<<<<<<<<<<<<
|
|
*
|
|
* return target
|
|
*/
|
|
/*finally:*/ {
|
|
/*normal exit:*/{
|
|
free(__pyx_v_problem.x);
|
|
goto __pyx_L9;
|
|
}
|
|
/*exception exit:*/{
|
|
__pyx_L8_error:;
|
|
__pyx_t_10 = 0; __pyx_t_11 = 0; __pyx_t_12 = 0; __pyx_t_17 = 0; __pyx_t_18 = 0; __pyx_t_19 = 0;
|
|
__Pyx_XDECREF(__pyx_t_5); __pyx_t_5 = 0;
|
|
__Pyx_XDECREF(__pyx_t_7); __pyx_t_7 = 0;
|
|
__Pyx_XDECREF(__pyx_t_3); __pyx_t_3 = 0;
|
|
__Pyx_XDECREF(__pyx_t_6); __pyx_t_6 = 0;
|
|
__Pyx_XDECREF(__pyx_t_4); __pyx_t_4 = 0;
|
|
if (PY_MAJOR_VERSION >= 3) __Pyx_ExceptionSwap(&__pyx_t_17, &__pyx_t_18, &__pyx_t_19);
|
|
if ((PY_MAJOR_VERSION < 3) || unlikely(__Pyx_GetException(&__pyx_t_10, &__pyx_t_11, &__pyx_t_12) < 0)) __Pyx_ErrFetch(&__pyx_t_10, &__pyx_t_11, &__pyx_t_12);
|
|
__Pyx_XGOTREF(__pyx_t_10);
|
|
__Pyx_XGOTREF(__pyx_t_11);
|
|
__Pyx_XGOTREF(__pyx_t_12);
|
|
__Pyx_XGOTREF(__pyx_t_17);
|
|
__Pyx_XGOTREF(__pyx_t_18);
|
|
__Pyx_XGOTREF(__pyx_t_19);
|
|
__pyx_t_14 = __pyx_lineno; __pyx_t_9 = __pyx_clineno; __pyx_t_16 = __pyx_filename;
|
|
{
|
|
free(__pyx_v_problem.x);
|
|
}
|
|
if (PY_MAJOR_VERSION >= 3) {
|
|
__Pyx_XGIVEREF(__pyx_t_17);
|
|
__Pyx_XGIVEREF(__pyx_t_18);
|
|
__Pyx_XGIVEREF(__pyx_t_19);
|
|
__Pyx_ExceptionReset(__pyx_t_17, __pyx_t_18, __pyx_t_19);
|
|
}
|
|
__Pyx_XGIVEREF(__pyx_t_10);
|
|
__Pyx_XGIVEREF(__pyx_t_11);
|
|
__Pyx_XGIVEREF(__pyx_t_12);
|
|
__Pyx_ErrRestore(__pyx_t_10, __pyx_t_11, __pyx_t_12);
|
|
__pyx_t_10 = 0; __pyx_t_11 = 0; __pyx_t_12 = 0; __pyx_t_17 = 0; __pyx_t_18 = 0; __pyx_t_19 = 0;
|
|
__pyx_lineno = __pyx_t_14; __pyx_clineno = __pyx_t_9; __pyx_filename = __pyx_t_16;
|
|
goto __pyx_L1_error;
|
|
}
|
|
__pyx_L9:;
|
|
}
|
|
|
|
/* "sklearn/svm/libsvm.pyx":569
|
|
* free(problem.x)
|
|
*
|
|
* return target # <<<<<<<<<<<<<<
|
|
*
|
|
*
|
|
*/
|
|
__Pyx_XDECREF(__pyx_r);
|
|
__Pyx_INCREF(((PyObject *)__pyx_v_target));
|
|
__pyx_r = ((PyObject *)__pyx_v_target);
|
|
goto __pyx_L0;
|
|
|
|
/* "sklearn/svm/libsvm.pyx":461
|
|
*
|
|
*
|
|
* def cross_validation( # <<<<<<<<<<<<<<
|
|
* np.ndarray[np.float64_t, ndim=2, mode='c'] X,
|
|
* np.ndarray[np.float64_t, ndim=1, mode='c'] Y,
|
|
*/
|
|
|
|
/* function exit code */
|
|
__pyx_L1_error:;
|
|
__Pyx_XDECREF(__pyx_t_3);
|
|
__Pyx_XDECREF(__pyx_t_4);
|
|
__Pyx_XDECREF(__pyx_t_5);
|
|
__Pyx_XDECREF(__pyx_t_6);
|
|
__Pyx_XDECREF(__pyx_t_7);
|
|
{ PyObject *__pyx_type, *__pyx_value, *__pyx_tb;
|
|
__Pyx_ErrFetch(&__pyx_type, &__pyx_value, &__pyx_tb);
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_X.rcbuffer->pybuffer);
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_Y.rcbuffer->pybuffer);
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_class_weight.rcbuffer->pybuffer);
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_class_weight_label.rcbuffer->pybuffer);
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_sample_weight.rcbuffer->pybuffer);
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_target.rcbuffer->pybuffer);
|
|
__Pyx_ErrRestore(__pyx_type, __pyx_value, __pyx_tb);}
|
|
__Pyx_AddTraceback("sklearn.svm.libsvm.cross_validation", __pyx_clineno, __pyx_lineno, __pyx_filename);
|
|
__pyx_r = NULL;
|
|
goto __pyx_L2;
|
|
__pyx_L0:;
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_X.rcbuffer->pybuffer);
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_Y.rcbuffer->pybuffer);
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_class_weight.rcbuffer->pybuffer);
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_class_weight_label.rcbuffer->pybuffer);
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_sample_weight.rcbuffer->pybuffer);
|
|
__Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_target.rcbuffer->pybuffer);
|
|
__pyx_L2:;
|
|
__Pyx_XDECREF(__pyx_v_kernel_index);
|
|
__Pyx_XDECREF((PyObject *)__pyx_v_class_weight_label);
|
|
__Pyx_XDECREF((PyObject *)__pyx_v_target);
|
|
__Pyx_XDECREF((PyObject *)__pyx_v_sample_weight);
|
|
__Pyx_XGIVEREF(__pyx_r);
|
|
__Pyx_RefNannyFinishContext();
|
|
return __pyx_r;
|
|
}
|
|
|
|
/* "sklearn/svm/libsvm.pyx":572
|
|
*
|
|
*
|
|
* def set_verbosity_wrap(int verbosity): # <<<<<<<<<<<<<<
|
|
* """
|
|
* Control verbosity of libsvm library
|
|
*/
|
|
|
|
/* Python wrapper */
|
|
static PyObject *__pyx_pw_7sklearn_3svm_6libsvm_11set_verbosity_wrap(PyObject *__pyx_self, PyObject *__pyx_arg_verbosity); /*proto*/
|
|
static char __pyx_doc_7sklearn_3svm_6libsvm_10set_verbosity_wrap[] = "\n Control verbosity of libsvm library\n ";
|
|
static PyMethodDef __pyx_mdef_7sklearn_3svm_6libsvm_11set_verbosity_wrap = {__Pyx_NAMESTR("set_verbosity_wrap"), (PyCFunction)__pyx_pw_7sklearn_3svm_6libsvm_11set_verbosity_wrap, METH_O, __Pyx_DOCSTR(__pyx_doc_7sklearn_3svm_6libsvm_10set_verbosity_wrap)};
|
|
static PyObject *__pyx_pw_7sklearn_3svm_6libsvm_11set_verbosity_wrap(PyObject *__pyx_self, PyObject *__pyx_arg_verbosity) {
|
|
int __pyx_v_verbosity;
|
|
int __pyx_lineno = 0;
|
|
const char *__pyx_filename = NULL;
|
|
int __pyx_clineno = 0;
|
|
PyObject *__pyx_r = 0;
|
|
__Pyx_RefNannyDeclarations
|
|
__Pyx_RefNannySetupContext("set_verbosity_wrap (wrapper)", 0);
|
|
assert(__pyx_arg_verbosity); {
|
|
__pyx_v_verbosity = __Pyx_PyInt_As_int(__pyx_arg_verbosity); if (unlikely((__pyx_v_verbosity == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 572; __pyx_clineno = __LINE__; goto __pyx_L3_error;}
|
|
}
|
|
goto __pyx_L4_argument_unpacking_done;
|
|
__pyx_L3_error:;
|
|
__Pyx_AddTraceback("sklearn.svm.libsvm.set_verbosity_wrap", __pyx_clineno, __pyx_lineno, __pyx_filename);
|
|
__Pyx_RefNannyFinishContext();
|
|
return NULL;
|
|
__pyx_L4_argument_unpacking_done:;
|
|
__pyx_r = __pyx_pf_7sklearn_3svm_6libsvm_10set_verbosity_wrap(__pyx_self, ((int)__pyx_v_verbosity));
|
|
|
|
/* function exit code */
|
|
__Pyx_RefNannyFinishContext();
|
|
return __pyx_r;
|
|
}
|
|
|
|
static PyObject *__pyx_pf_7sklearn_3svm_6libsvm_10set_verbosity_wrap(CYTHON_UNUSED PyObject *__pyx_self, int __pyx_v_verbosity) {
|
|
PyObject *__pyx_r = NULL;
|
|
__Pyx_RefNannyDeclarations
|
|
__Pyx_RefNannySetupContext("set_verbosity_wrap", 0);
|
|
|
|
/* "sklearn/svm/libsvm.pyx":576
|
|
* Control verbosity of libsvm library
|
|
* """
|
|
* set_verbosity(verbosity) # <<<<<<<<<<<<<<
|
|
*/
|
|
set_verbosity(__pyx_v_verbosity);
|
|
|
|
/* "sklearn/svm/libsvm.pyx":572
|
|
*
|
|
*
|
|
* def set_verbosity_wrap(int verbosity): # <<<<<<<<<<<<<<
|
|
* """
|
|
* Control verbosity of libsvm library
|
|
*/
|
|
|
|
/* function exit code */
|
|
__pyx_r = Py_None; __Pyx_INCREF(Py_None);
|
|
__Pyx_XGIVEREF(__pyx_r);
|
|
__Pyx_RefNannyFinishContext();
|
|
return __pyx_r;
|
|
}
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":194
|
|
* # experimental exception made for __getbuffer__ and __releasebuffer__
|
|
* # -- the details of this may change.
|
|
* def __getbuffer__(ndarray self, Py_buffer* info, int flags): # <<<<<<<<<<<<<<
|
|
* # This implementation of getbuffer is geared towards Cython
|
|
* # requirements, and does not yet fullfill the PEP.
|
|
*/
|
|
|
|
/* Python wrapper */
|
|
static CYTHON_UNUSED int __pyx_pw_5numpy_7ndarray_1__getbuffer__(PyObject *__pyx_v_self, Py_buffer *__pyx_v_info, int __pyx_v_flags); /*proto*/
|
|
static CYTHON_UNUSED int __pyx_pw_5numpy_7ndarray_1__getbuffer__(PyObject *__pyx_v_self, Py_buffer *__pyx_v_info, int __pyx_v_flags) {
|
|
int __pyx_r;
|
|
__Pyx_RefNannyDeclarations
|
|
__Pyx_RefNannySetupContext("__getbuffer__ (wrapper)", 0);
|
|
__pyx_r = __pyx_pf_5numpy_7ndarray___getbuffer__(((PyArrayObject *)__pyx_v_self), ((Py_buffer *)__pyx_v_info), ((int)__pyx_v_flags));
|
|
|
|
/* function exit code */
|
|
__Pyx_RefNannyFinishContext();
|
|
return __pyx_r;
|
|
}
|
|
|
|
static int __pyx_pf_5numpy_7ndarray___getbuffer__(PyArrayObject *__pyx_v_self, Py_buffer *__pyx_v_info, int __pyx_v_flags) {
|
|
int __pyx_v_copy_shape;
|
|
int __pyx_v_i;
|
|
int __pyx_v_ndim;
|
|
int __pyx_v_endian_detector;
|
|
int __pyx_v_little_endian;
|
|
int __pyx_v_t;
|
|
char *__pyx_v_f;
|
|
PyArray_Descr *__pyx_v_descr = 0;
|
|
int __pyx_v_offset;
|
|
int __pyx_v_hasfields;
|
|
int __pyx_r;
|
|
__Pyx_RefNannyDeclarations
|
|
int __pyx_t_1;
|
|
int __pyx_t_2;
|
|
int __pyx_t_3;
|
|
PyObject *__pyx_t_4 = NULL;
|
|
int __pyx_t_5;
|
|
int __pyx_t_6;
|
|
int __pyx_t_7;
|
|
PyObject *__pyx_t_8 = NULL;
|
|
char *__pyx_t_9;
|
|
int __pyx_lineno = 0;
|
|
const char *__pyx_filename = NULL;
|
|
int __pyx_clineno = 0;
|
|
__Pyx_RefNannySetupContext("__getbuffer__", 0);
|
|
if (__pyx_v_info != NULL) {
|
|
__pyx_v_info->obj = Py_None; __Pyx_INCREF(Py_None);
|
|
__Pyx_GIVEREF(__pyx_v_info->obj);
|
|
}
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":200
|
|
* # of flags
|
|
*
|
|
* if info == NULL: return # <<<<<<<<<<<<<<
|
|
*
|
|
* cdef int copy_shape, i, ndim
|
|
*/
|
|
__pyx_t_1 = ((__pyx_v_info == NULL) != 0);
|
|
if (__pyx_t_1) {
|
|
__pyx_r = 0;
|
|
goto __pyx_L0;
|
|
}
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":203
|
|
*
|
|
* cdef int copy_shape, i, ndim
|
|
* cdef int endian_detector = 1 # <<<<<<<<<<<<<<
|
|
* cdef bint little_endian = ((<char*>&endian_detector)[0] != 0)
|
|
*
|
|
*/
|
|
__pyx_v_endian_detector = 1;
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":204
|
|
* cdef int copy_shape, i, ndim
|
|
* cdef int endian_detector = 1
|
|
* cdef bint little_endian = ((<char*>&endian_detector)[0] != 0) # <<<<<<<<<<<<<<
|
|
*
|
|
* ndim = PyArray_NDIM(self)
|
|
*/
|
|
__pyx_v_little_endian = ((((char *)(&__pyx_v_endian_detector))[0]) != 0);
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":206
|
|
* cdef bint little_endian = ((<char*>&endian_detector)[0] != 0)
|
|
*
|
|
* ndim = PyArray_NDIM(self) # <<<<<<<<<<<<<<
|
|
*
|
|
* if sizeof(npy_intp) != sizeof(Py_ssize_t):
|
|
*/
|
|
__pyx_v_ndim = PyArray_NDIM(__pyx_v_self);
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":208
|
|
* ndim = PyArray_NDIM(self)
|
|
*
|
|
* if sizeof(npy_intp) != sizeof(Py_ssize_t): # <<<<<<<<<<<<<<
|
|
* copy_shape = 1
|
|
* else:
|
|
*/
|
|
__pyx_t_1 = (((sizeof(npy_intp)) != (sizeof(Py_ssize_t))) != 0);
|
|
if (__pyx_t_1) {
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":209
|
|
*
|
|
* if sizeof(npy_intp) != sizeof(Py_ssize_t):
|
|
* copy_shape = 1 # <<<<<<<<<<<<<<
|
|
* else:
|
|
* copy_shape = 0
|
|
*/
|
|
__pyx_v_copy_shape = 1;
|
|
goto __pyx_L4;
|
|
}
|
|
/*else*/ {
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":211
|
|
* copy_shape = 1
|
|
* else:
|
|
* copy_shape = 0 # <<<<<<<<<<<<<<
|
|
*
|
|
* if ((flags & pybuf.PyBUF_C_CONTIGUOUS == pybuf.PyBUF_C_CONTIGUOUS)
|
|
*/
|
|
__pyx_v_copy_shape = 0;
|
|
}
|
|
__pyx_L4:;
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":213
|
|
* copy_shape = 0
|
|
*
|
|
* if ((flags & pybuf.PyBUF_C_CONTIGUOUS == pybuf.PyBUF_C_CONTIGUOUS) # <<<<<<<<<<<<<<
|
|
* and not PyArray_CHKFLAGS(self, NPY_C_CONTIGUOUS)):
|
|
* raise ValueError(u"ndarray is not C contiguous")
|
|
*/
|
|
__pyx_t_1 = (((__pyx_v_flags & PyBUF_C_CONTIGUOUS) == PyBUF_C_CONTIGUOUS) != 0);
|
|
if (__pyx_t_1) {
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":214
|
|
*
|
|
* if ((flags & pybuf.PyBUF_C_CONTIGUOUS == pybuf.PyBUF_C_CONTIGUOUS)
|
|
* and not PyArray_CHKFLAGS(self, NPY_C_CONTIGUOUS)): # <<<<<<<<<<<<<<
|
|
* raise ValueError(u"ndarray is not C contiguous")
|
|
*
|
|
*/
|
|
__pyx_t_2 = ((!(PyArray_CHKFLAGS(__pyx_v_self, NPY_C_CONTIGUOUS) != 0)) != 0);
|
|
__pyx_t_3 = __pyx_t_2;
|
|
} else {
|
|
__pyx_t_3 = __pyx_t_1;
|
|
}
|
|
if (__pyx_t_3) {
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":215
|
|
* if ((flags & pybuf.PyBUF_C_CONTIGUOUS == pybuf.PyBUF_C_CONTIGUOUS)
|
|
* and not PyArray_CHKFLAGS(self, NPY_C_CONTIGUOUS)):
|
|
* raise ValueError(u"ndarray is not C contiguous") # <<<<<<<<<<<<<<
|
|
*
|
|
* if ((flags & pybuf.PyBUF_F_CONTIGUOUS == pybuf.PyBUF_F_CONTIGUOUS)
|
|
*/
|
|
__pyx_t_4 = __Pyx_PyObject_Call(__pyx_builtin_ValueError, __pyx_tuple__29, NULL); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 215; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_4);
|
|
__Pyx_Raise(__pyx_t_4, 0, 0, 0);
|
|
__Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0;
|
|
{__pyx_filename = __pyx_f[1]; __pyx_lineno = 215; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
}
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":217
|
|
* raise ValueError(u"ndarray is not C contiguous")
|
|
*
|
|
* if ((flags & pybuf.PyBUF_F_CONTIGUOUS == pybuf.PyBUF_F_CONTIGUOUS) # <<<<<<<<<<<<<<
|
|
* and not PyArray_CHKFLAGS(self, NPY_F_CONTIGUOUS)):
|
|
* raise ValueError(u"ndarray is not Fortran contiguous")
|
|
*/
|
|
__pyx_t_3 = (((__pyx_v_flags & PyBUF_F_CONTIGUOUS) == PyBUF_F_CONTIGUOUS) != 0);
|
|
if (__pyx_t_3) {
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":218
|
|
*
|
|
* if ((flags & pybuf.PyBUF_F_CONTIGUOUS == pybuf.PyBUF_F_CONTIGUOUS)
|
|
* and not PyArray_CHKFLAGS(self, NPY_F_CONTIGUOUS)): # <<<<<<<<<<<<<<
|
|
* raise ValueError(u"ndarray is not Fortran contiguous")
|
|
*
|
|
*/
|
|
__pyx_t_1 = ((!(PyArray_CHKFLAGS(__pyx_v_self, NPY_F_CONTIGUOUS) != 0)) != 0);
|
|
__pyx_t_2 = __pyx_t_1;
|
|
} else {
|
|
__pyx_t_2 = __pyx_t_3;
|
|
}
|
|
if (__pyx_t_2) {
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":219
|
|
* if ((flags & pybuf.PyBUF_F_CONTIGUOUS == pybuf.PyBUF_F_CONTIGUOUS)
|
|
* and not PyArray_CHKFLAGS(self, NPY_F_CONTIGUOUS)):
|
|
* raise ValueError(u"ndarray is not Fortran contiguous") # <<<<<<<<<<<<<<
|
|
*
|
|
* info.buf = PyArray_DATA(self)
|
|
*/
|
|
__pyx_t_4 = __Pyx_PyObject_Call(__pyx_builtin_ValueError, __pyx_tuple__30, NULL); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 219; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_4);
|
|
__Pyx_Raise(__pyx_t_4, 0, 0, 0);
|
|
__Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0;
|
|
{__pyx_filename = __pyx_f[1]; __pyx_lineno = 219; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
}
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":221
|
|
* raise ValueError(u"ndarray is not Fortran contiguous")
|
|
*
|
|
* info.buf = PyArray_DATA(self) # <<<<<<<<<<<<<<
|
|
* info.ndim = ndim
|
|
* if copy_shape:
|
|
*/
|
|
__pyx_v_info->buf = PyArray_DATA(__pyx_v_self);
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":222
|
|
*
|
|
* info.buf = PyArray_DATA(self)
|
|
* info.ndim = ndim # <<<<<<<<<<<<<<
|
|
* if copy_shape:
|
|
* # Allocate new buffer for strides and shape info.
|
|
*/
|
|
__pyx_v_info->ndim = __pyx_v_ndim;
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":223
|
|
* info.buf = PyArray_DATA(self)
|
|
* info.ndim = ndim
|
|
* if copy_shape: # <<<<<<<<<<<<<<
|
|
* # Allocate new buffer for strides and shape info.
|
|
* # This is allocated as one block, strides first.
|
|
*/
|
|
__pyx_t_2 = (__pyx_v_copy_shape != 0);
|
|
if (__pyx_t_2) {
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":226
|
|
* # Allocate new buffer for strides and shape info.
|
|
* # This is allocated as one block, strides first.
|
|
* info.strides = <Py_ssize_t*>stdlib.malloc(sizeof(Py_ssize_t) * <size_t>ndim * 2) # <<<<<<<<<<<<<<
|
|
* info.shape = info.strides + ndim
|
|
* for i in range(ndim):
|
|
*/
|
|
__pyx_v_info->strides = ((Py_ssize_t *)malloc((((sizeof(Py_ssize_t)) * ((size_t)__pyx_v_ndim)) * 2)));
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":227
|
|
* # This is allocated as one block, strides first.
|
|
* info.strides = <Py_ssize_t*>stdlib.malloc(sizeof(Py_ssize_t) * <size_t>ndim * 2)
|
|
* info.shape = info.strides + ndim # <<<<<<<<<<<<<<
|
|
* for i in range(ndim):
|
|
* info.strides[i] = PyArray_STRIDES(self)[i]
|
|
*/
|
|
__pyx_v_info->shape = (__pyx_v_info->strides + __pyx_v_ndim);
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":228
|
|
* info.strides = <Py_ssize_t*>stdlib.malloc(sizeof(Py_ssize_t) * <size_t>ndim * 2)
|
|
* info.shape = info.strides + ndim
|
|
* for i in range(ndim): # <<<<<<<<<<<<<<
|
|
* info.strides[i] = PyArray_STRIDES(self)[i]
|
|
* info.shape[i] = PyArray_DIMS(self)[i]
|
|
*/
|
|
__pyx_t_5 = __pyx_v_ndim;
|
|
for (__pyx_t_6 = 0; __pyx_t_6 < __pyx_t_5; __pyx_t_6+=1) {
|
|
__pyx_v_i = __pyx_t_6;
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":229
|
|
* info.shape = info.strides + ndim
|
|
* for i in range(ndim):
|
|
* info.strides[i] = PyArray_STRIDES(self)[i] # <<<<<<<<<<<<<<
|
|
* info.shape[i] = PyArray_DIMS(self)[i]
|
|
* else:
|
|
*/
|
|
(__pyx_v_info->strides[__pyx_v_i]) = (PyArray_STRIDES(__pyx_v_self)[__pyx_v_i]);
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":230
|
|
* for i in range(ndim):
|
|
* info.strides[i] = PyArray_STRIDES(self)[i]
|
|
* info.shape[i] = PyArray_DIMS(self)[i] # <<<<<<<<<<<<<<
|
|
* else:
|
|
* info.strides = <Py_ssize_t*>PyArray_STRIDES(self)
|
|
*/
|
|
(__pyx_v_info->shape[__pyx_v_i]) = (PyArray_DIMS(__pyx_v_self)[__pyx_v_i]);
|
|
}
|
|
goto __pyx_L7;
|
|
}
|
|
/*else*/ {
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":232
|
|
* info.shape[i] = PyArray_DIMS(self)[i]
|
|
* else:
|
|
* info.strides = <Py_ssize_t*>PyArray_STRIDES(self) # <<<<<<<<<<<<<<
|
|
* info.shape = <Py_ssize_t*>PyArray_DIMS(self)
|
|
* info.suboffsets = NULL
|
|
*/
|
|
__pyx_v_info->strides = ((Py_ssize_t *)PyArray_STRIDES(__pyx_v_self));
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":233
|
|
* else:
|
|
* info.strides = <Py_ssize_t*>PyArray_STRIDES(self)
|
|
* info.shape = <Py_ssize_t*>PyArray_DIMS(self) # <<<<<<<<<<<<<<
|
|
* info.suboffsets = NULL
|
|
* info.itemsize = PyArray_ITEMSIZE(self)
|
|
*/
|
|
__pyx_v_info->shape = ((Py_ssize_t *)PyArray_DIMS(__pyx_v_self));
|
|
}
|
|
__pyx_L7:;
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":234
|
|
* info.strides = <Py_ssize_t*>PyArray_STRIDES(self)
|
|
* info.shape = <Py_ssize_t*>PyArray_DIMS(self)
|
|
* info.suboffsets = NULL # <<<<<<<<<<<<<<
|
|
* info.itemsize = PyArray_ITEMSIZE(self)
|
|
* info.readonly = not PyArray_ISWRITEABLE(self)
|
|
*/
|
|
__pyx_v_info->suboffsets = NULL;
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":235
|
|
* info.shape = <Py_ssize_t*>PyArray_DIMS(self)
|
|
* info.suboffsets = NULL
|
|
* info.itemsize = PyArray_ITEMSIZE(self) # <<<<<<<<<<<<<<
|
|
* info.readonly = not PyArray_ISWRITEABLE(self)
|
|
*
|
|
*/
|
|
__pyx_v_info->itemsize = PyArray_ITEMSIZE(__pyx_v_self);
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":236
|
|
* info.suboffsets = NULL
|
|
* info.itemsize = PyArray_ITEMSIZE(self)
|
|
* info.readonly = not PyArray_ISWRITEABLE(self) # <<<<<<<<<<<<<<
|
|
*
|
|
* cdef int t
|
|
*/
|
|
__pyx_v_info->readonly = (!(PyArray_ISWRITEABLE(__pyx_v_self) != 0));
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":239
|
|
*
|
|
* cdef int t
|
|
* cdef char* f = NULL # <<<<<<<<<<<<<<
|
|
* cdef dtype descr = self.descr
|
|
* cdef list stack
|
|
*/
|
|
__pyx_v_f = NULL;
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":240
|
|
* cdef int t
|
|
* cdef char* f = NULL
|
|
* cdef dtype descr = self.descr # <<<<<<<<<<<<<<
|
|
* cdef list stack
|
|
* cdef int offset
|
|
*/
|
|
__pyx_t_4 = ((PyObject *)__pyx_v_self->descr);
|
|
__Pyx_INCREF(__pyx_t_4);
|
|
__pyx_v_descr = ((PyArray_Descr *)__pyx_t_4);
|
|
__pyx_t_4 = 0;
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":244
|
|
* cdef int offset
|
|
*
|
|
* cdef bint hasfields = PyDataType_HASFIELDS(descr) # <<<<<<<<<<<<<<
|
|
*
|
|
* if not hasfields and not copy_shape:
|
|
*/
|
|
__pyx_v_hasfields = PyDataType_HASFIELDS(__pyx_v_descr);
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":246
|
|
* cdef bint hasfields = PyDataType_HASFIELDS(descr)
|
|
*
|
|
* if not hasfields and not copy_shape: # <<<<<<<<<<<<<<
|
|
* # do not call releasebuffer
|
|
* info.obj = None
|
|
*/
|
|
__pyx_t_2 = ((!(__pyx_v_hasfields != 0)) != 0);
|
|
if (__pyx_t_2) {
|
|
__pyx_t_3 = ((!(__pyx_v_copy_shape != 0)) != 0);
|
|
__pyx_t_1 = __pyx_t_3;
|
|
} else {
|
|
__pyx_t_1 = __pyx_t_2;
|
|
}
|
|
if (__pyx_t_1) {
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":248
|
|
* if not hasfields and not copy_shape:
|
|
* # do not call releasebuffer
|
|
* info.obj = None # <<<<<<<<<<<<<<
|
|
* else:
|
|
* # need to call releasebuffer
|
|
*/
|
|
__Pyx_INCREF(Py_None);
|
|
__Pyx_GIVEREF(Py_None);
|
|
__Pyx_GOTREF(__pyx_v_info->obj);
|
|
__Pyx_DECREF(__pyx_v_info->obj);
|
|
__pyx_v_info->obj = Py_None;
|
|
goto __pyx_L10;
|
|
}
|
|
/*else*/ {
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":251
|
|
* else:
|
|
* # need to call releasebuffer
|
|
* info.obj = self # <<<<<<<<<<<<<<
|
|
*
|
|
* if not hasfields:
|
|
*/
|
|
__Pyx_INCREF(((PyObject *)__pyx_v_self));
|
|
__Pyx_GIVEREF(((PyObject *)__pyx_v_self));
|
|
__Pyx_GOTREF(__pyx_v_info->obj);
|
|
__Pyx_DECREF(__pyx_v_info->obj);
|
|
__pyx_v_info->obj = ((PyObject *)__pyx_v_self);
|
|
}
|
|
__pyx_L10:;
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":253
|
|
* info.obj = self
|
|
*
|
|
* if not hasfields: # <<<<<<<<<<<<<<
|
|
* t = descr.type_num
|
|
* if ((descr.byteorder == c'>' and little_endian) or
|
|
*/
|
|
__pyx_t_1 = ((!(__pyx_v_hasfields != 0)) != 0);
|
|
if (__pyx_t_1) {
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":254
|
|
*
|
|
* if not hasfields:
|
|
* t = descr.type_num # <<<<<<<<<<<<<<
|
|
* if ((descr.byteorder == c'>' and little_endian) or
|
|
* (descr.byteorder == c'<' and not little_endian)):
|
|
*/
|
|
__pyx_t_5 = __pyx_v_descr->type_num;
|
|
__pyx_v_t = __pyx_t_5;
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":255
|
|
* if not hasfields:
|
|
* t = descr.type_num
|
|
* if ((descr.byteorder == c'>' and little_endian) or # <<<<<<<<<<<<<<
|
|
* (descr.byteorder == c'<' and not little_endian)):
|
|
* raise ValueError(u"Non-native byte order not supported")
|
|
*/
|
|
__pyx_t_1 = ((__pyx_v_descr->byteorder == '>') != 0);
|
|
if (__pyx_t_1) {
|
|
__pyx_t_2 = (__pyx_v_little_endian != 0);
|
|
} else {
|
|
__pyx_t_2 = __pyx_t_1;
|
|
}
|
|
if (!__pyx_t_2) {
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":256
|
|
* t = descr.type_num
|
|
* if ((descr.byteorder == c'>' and little_endian) or
|
|
* (descr.byteorder == c'<' and not little_endian)): # <<<<<<<<<<<<<<
|
|
* raise ValueError(u"Non-native byte order not supported")
|
|
* if t == NPY_BYTE: f = "b"
|
|
*/
|
|
__pyx_t_1 = ((__pyx_v_descr->byteorder == '<') != 0);
|
|
if (__pyx_t_1) {
|
|
__pyx_t_3 = ((!(__pyx_v_little_endian != 0)) != 0);
|
|
__pyx_t_7 = __pyx_t_3;
|
|
} else {
|
|
__pyx_t_7 = __pyx_t_1;
|
|
}
|
|
__pyx_t_1 = __pyx_t_7;
|
|
} else {
|
|
__pyx_t_1 = __pyx_t_2;
|
|
}
|
|
if (__pyx_t_1) {
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":257
|
|
* if ((descr.byteorder == c'>' and little_endian) or
|
|
* (descr.byteorder == c'<' and not little_endian)):
|
|
* raise ValueError(u"Non-native byte order not supported") # <<<<<<<<<<<<<<
|
|
* if t == NPY_BYTE: f = "b"
|
|
* elif t == NPY_UBYTE: f = "B"
|
|
*/
|
|
__pyx_t_4 = __Pyx_PyObject_Call(__pyx_builtin_ValueError, __pyx_tuple__31, NULL); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 257; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_4);
|
|
__Pyx_Raise(__pyx_t_4, 0, 0, 0);
|
|
__Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0;
|
|
{__pyx_filename = __pyx_f[1]; __pyx_lineno = 257; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
}
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":274
|
|
* elif t == NPY_CDOUBLE: f = "Zd"
|
|
* elif t == NPY_CLONGDOUBLE: f = "Zg"
|
|
* elif t == NPY_OBJECT: f = "O" # <<<<<<<<<<<<<<
|
|
* else:
|
|
* raise ValueError(u"unknown dtype code in numpy.pxd (%d)" % t)
|
|
*/
|
|
switch (__pyx_v_t) {
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":258
|
|
* (descr.byteorder == c'<' and not little_endian)):
|
|
* raise ValueError(u"Non-native byte order not supported")
|
|
* if t == NPY_BYTE: f = "b" # <<<<<<<<<<<<<<
|
|
* elif t == NPY_UBYTE: f = "B"
|
|
* elif t == NPY_SHORT: f = "h"
|
|
*/
|
|
case NPY_BYTE:
|
|
__pyx_v_f = __pyx_k_b;
|
|
break;
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":259
|
|
* raise ValueError(u"Non-native byte order not supported")
|
|
* if t == NPY_BYTE: f = "b"
|
|
* elif t == NPY_UBYTE: f = "B" # <<<<<<<<<<<<<<
|
|
* elif t == NPY_SHORT: f = "h"
|
|
* elif t == NPY_USHORT: f = "H"
|
|
*/
|
|
case NPY_UBYTE:
|
|
__pyx_v_f = __pyx_k_B;
|
|
break;
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":260
|
|
* if t == NPY_BYTE: f = "b"
|
|
* elif t == NPY_UBYTE: f = "B"
|
|
* elif t == NPY_SHORT: f = "h" # <<<<<<<<<<<<<<
|
|
* elif t == NPY_USHORT: f = "H"
|
|
* elif t == NPY_INT: f = "i"
|
|
*/
|
|
case NPY_SHORT:
|
|
__pyx_v_f = __pyx_k_h;
|
|
break;
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":261
|
|
* elif t == NPY_UBYTE: f = "B"
|
|
* elif t == NPY_SHORT: f = "h"
|
|
* elif t == NPY_USHORT: f = "H" # <<<<<<<<<<<<<<
|
|
* elif t == NPY_INT: f = "i"
|
|
* elif t == NPY_UINT: f = "I"
|
|
*/
|
|
case NPY_USHORT:
|
|
__pyx_v_f = __pyx_k_H;
|
|
break;
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":262
|
|
* elif t == NPY_SHORT: f = "h"
|
|
* elif t == NPY_USHORT: f = "H"
|
|
* elif t == NPY_INT: f = "i" # <<<<<<<<<<<<<<
|
|
* elif t == NPY_UINT: f = "I"
|
|
* elif t == NPY_LONG: f = "l"
|
|
*/
|
|
case NPY_INT:
|
|
__pyx_v_f = __pyx_k_i;
|
|
break;
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":263
|
|
* elif t == NPY_USHORT: f = "H"
|
|
* elif t == NPY_INT: f = "i"
|
|
* elif t == NPY_UINT: f = "I" # <<<<<<<<<<<<<<
|
|
* elif t == NPY_LONG: f = "l"
|
|
* elif t == NPY_ULONG: f = "L"
|
|
*/
|
|
case NPY_UINT:
|
|
__pyx_v_f = __pyx_k_I;
|
|
break;
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":264
|
|
* elif t == NPY_INT: f = "i"
|
|
* elif t == NPY_UINT: f = "I"
|
|
* elif t == NPY_LONG: f = "l" # <<<<<<<<<<<<<<
|
|
* elif t == NPY_ULONG: f = "L"
|
|
* elif t == NPY_LONGLONG: f = "q"
|
|
*/
|
|
case NPY_LONG:
|
|
__pyx_v_f = __pyx_k_l;
|
|
break;
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":265
|
|
* elif t == NPY_UINT: f = "I"
|
|
* elif t == NPY_LONG: f = "l"
|
|
* elif t == NPY_ULONG: f = "L" # <<<<<<<<<<<<<<
|
|
* elif t == NPY_LONGLONG: f = "q"
|
|
* elif t == NPY_ULONGLONG: f = "Q"
|
|
*/
|
|
case NPY_ULONG:
|
|
__pyx_v_f = __pyx_k_L;
|
|
break;
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":266
|
|
* elif t == NPY_LONG: f = "l"
|
|
* elif t == NPY_ULONG: f = "L"
|
|
* elif t == NPY_LONGLONG: f = "q" # <<<<<<<<<<<<<<
|
|
* elif t == NPY_ULONGLONG: f = "Q"
|
|
* elif t == NPY_FLOAT: f = "f"
|
|
*/
|
|
case NPY_LONGLONG:
|
|
__pyx_v_f = __pyx_k_q;
|
|
break;
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":267
|
|
* elif t == NPY_ULONG: f = "L"
|
|
* elif t == NPY_LONGLONG: f = "q"
|
|
* elif t == NPY_ULONGLONG: f = "Q" # <<<<<<<<<<<<<<
|
|
* elif t == NPY_FLOAT: f = "f"
|
|
* elif t == NPY_DOUBLE: f = "d"
|
|
*/
|
|
case NPY_ULONGLONG:
|
|
__pyx_v_f = __pyx_k_Q;
|
|
break;
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":268
|
|
* elif t == NPY_LONGLONG: f = "q"
|
|
* elif t == NPY_ULONGLONG: f = "Q"
|
|
* elif t == NPY_FLOAT: f = "f" # <<<<<<<<<<<<<<
|
|
* elif t == NPY_DOUBLE: f = "d"
|
|
* elif t == NPY_LONGDOUBLE: f = "g"
|
|
*/
|
|
case NPY_FLOAT:
|
|
__pyx_v_f = __pyx_k_f;
|
|
break;
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":269
|
|
* elif t == NPY_ULONGLONG: f = "Q"
|
|
* elif t == NPY_FLOAT: f = "f"
|
|
* elif t == NPY_DOUBLE: f = "d" # <<<<<<<<<<<<<<
|
|
* elif t == NPY_LONGDOUBLE: f = "g"
|
|
* elif t == NPY_CFLOAT: f = "Zf"
|
|
*/
|
|
case NPY_DOUBLE:
|
|
__pyx_v_f = __pyx_k_d;
|
|
break;
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":270
|
|
* elif t == NPY_FLOAT: f = "f"
|
|
* elif t == NPY_DOUBLE: f = "d"
|
|
* elif t == NPY_LONGDOUBLE: f = "g" # <<<<<<<<<<<<<<
|
|
* elif t == NPY_CFLOAT: f = "Zf"
|
|
* elif t == NPY_CDOUBLE: f = "Zd"
|
|
*/
|
|
case NPY_LONGDOUBLE:
|
|
__pyx_v_f = __pyx_k_g;
|
|
break;
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":271
|
|
* elif t == NPY_DOUBLE: f = "d"
|
|
* elif t == NPY_LONGDOUBLE: f = "g"
|
|
* elif t == NPY_CFLOAT: f = "Zf" # <<<<<<<<<<<<<<
|
|
* elif t == NPY_CDOUBLE: f = "Zd"
|
|
* elif t == NPY_CLONGDOUBLE: f = "Zg"
|
|
*/
|
|
case NPY_CFLOAT:
|
|
__pyx_v_f = __pyx_k_Zf;
|
|
break;
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":272
|
|
* elif t == NPY_LONGDOUBLE: f = "g"
|
|
* elif t == NPY_CFLOAT: f = "Zf"
|
|
* elif t == NPY_CDOUBLE: f = "Zd" # <<<<<<<<<<<<<<
|
|
* elif t == NPY_CLONGDOUBLE: f = "Zg"
|
|
* elif t == NPY_OBJECT: f = "O"
|
|
*/
|
|
case NPY_CDOUBLE:
|
|
__pyx_v_f = __pyx_k_Zd;
|
|
break;
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":273
|
|
* elif t == NPY_CFLOAT: f = "Zf"
|
|
* elif t == NPY_CDOUBLE: f = "Zd"
|
|
* elif t == NPY_CLONGDOUBLE: f = "Zg" # <<<<<<<<<<<<<<
|
|
* elif t == NPY_OBJECT: f = "O"
|
|
* else:
|
|
*/
|
|
case NPY_CLONGDOUBLE:
|
|
__pyx_v_f = __pyx_k_Zg;
|
|
break;
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":274
|
|
* elif t == NPY_CDOUBLE: f = "Zd"
|
|
* elif t == NPY_CLONGDOUBLE: f = "Zg"
|
|
* elif t == NPY_OBJECT: f = "O" # <<<<<<<<<<<<<<
|
|
* else:
|
|
* raise ValueError(u"unknown dtype code in numpy.pxd (%d)" % t)
|
|
*/
|
|
case NPY_OBJECT:
|
|
__pyx_v_f = __pyx_k_O;
|
|
break;
|
|
default:
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":276
|
|
* elif t == NPY_OBJECT: f = "O"
|
|
* else:
|
|
* raise ValueError(u"unknown dtype code in numpy.pxd (%d)" % t) # <<<<<<<<<<<<<<
|
|
* info.format = f
|
|
* return
|
|
*/
|
|
__pyx_t_4 = __Pyx_PyInt_From_int(__pyx_v_t); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 276; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_4);
|
|
__pyx_t_8 = PyUnicode_Format(__pyx_kp_u_unknown_dtype_code_in_numpy_pxd, __pyx_t_4); if (unlikely(!__pyx_t_8)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 276; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_8);
|
|
__Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0;
|
|
__pyx_t_4 = PyTuple_New(1); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 276; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_4);
|
|
PyTuple_SET_ITEM(__pyx_t_4, 0, __pyx_t_8);
|
|
__Pyx_GIVEREF(__pyx_t_8);
|
|
__pyx_t_8 = 0;
|
|
__pyx_t_8 = __Pyx_PyObject_Call(__pyx_builtin_ValueError, __pyx_t_4, NULL); if (unlikely(!__pyx_t_8)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 276; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_8);
|
|
__Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0;
|
|
__Pyx_Raise(__pyx_t_8, 0, 0, 0);
|
|
__Pyx_DECREF(__pyx_t_8); __pyx_t_8 = 0;
|
|
{__pyx_filename = __pyx_f[1]; __pyx_lineno = 276; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
break;
|
|
}
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":277
|
|
* else:
|
|
* raise ValueError(u"unknown dtype code in numpy.pxd (%d)" % t)
|
|
* info.format = f # <<<<<<<<<<<<<<
|
|
* return
|
|
* else:
|
|
*/
|
|
__pyx_v_info->format = __pyx_v_f;
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":278
|
|
* raise ValueError(u"unknown dtype code in numpy.pxd (%d)" % t)
|
|
* info.format = f
|
|
* return # <<<<<<<<<<<<<<
|
|
* else:
|
|
* info.format = <char*>stdlib.malloc(_buffer_format_string_len)
|
|
*/
|
|
__pyx_r = 0;
|
|
goto __pyx_L0;
|
|
}
|
|
/*else*/ {
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":280
|
|
* return
|
|
* else:
|
|
* info.format = <char*>stdlib.malloc(_buffer_format_string_len) # <<<<<<<<<<<<<<
|
|
* info.format[0] = c'^' # Native data types, manual alignment
|
|
* offset = 0
|
|
*/
|
|
__pyx_v_info->format = ((char *)malloc(255));
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":281
|
|
* else:
|
|
* info.format = <char*>stdlib.malloc(_buffer_format_string_len)
|
|
* info.format[0] = c'^' # Native data types, manual alignment # <<<<<<<<<<<<<<
|
|
* offset = 0
|
|
* f = _util_dtypestring(descr, info.format + 1,
|
|
*/
|
|
(__pyx_v_info->format[0]) = '^';
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":282
|
|
* info.format = <char*>stdlib.malloc(_buffer_format_string_len)
|
|
* info.format[0] = c'^' # Native data types, manual alignment
|
|
* offset = 0 # <<<<<<<<<<<<<<
|
|
* f = _util_dtypestring(descr, info.format + 1,
|
|
* info.format + _buffer_format_string_len,
|
|
*/
|
|
__pyx_v_offset = 0;
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":283
|
|
* info.format[0] = c'^' # Native data types, manual alignment
|
|
* offset = 0
|
|
* f = _util_dtypestring(descr, info.format + 1, # <<<<<<<<<<<<<<
|
|
* info.format + _buffer_format_string_len,
|
|
* &offset)
|
|
*/
|
|
__pyx_t_9 = __pyx_f_5numpy__util_dtypestring(__pyx_v_descr, (__pyx_v_info->format + 1), (__pyx_v_info->format + 255), (&__pyx_v_offset)); if (unlikely(__pyx_t_9 == NULL)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 283; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__pyx_v_f = __pyx_t_9;
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":286
|
|
* info.format + _buffer_format_string_len,
|
|
* &offset)
|
|
* f[0] = c'\0' # Terminate format string # <<<<<<<<<<<<<<
|
|
*
|
|
* def __releasebuffer__(ndarray self, Py_buffer* info):
|
|
*/
|
|
(__pyx_v_f[0]) = '\x00';
|
|
}
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":194
|
|
* # experimental exception made for __getbuffer__ and __releasebuffer__
|
|
* # -- the details of this may change.
|
|
* def __getbuffer__(ndarray self, Py_buffer* info, int flags): # <<<<<<<<<<<<<<
|
|
* # This implementation of getbuffer is geared towards Cython
|
|
* # requirements, and does not yet fullfill the PEP.
|
|
*/
|
|
|
|
/* function exit code */
|
|
__pyx_r = 0;
|
|
goto __pyx_L0;
|
|
__pyx_L1_error:;
|
|
__Pyx_XDECREF(__pyx_t_4);
|
|
__Pyx_XDECREF(__pyx_t_8);
|
|
__Pyx_AddTraceback("numpy.ndarray.__getbuffer__", __pyx_clineno, __pyx_lineno, __pyx_filename);
|
|
__pyx_r = -1;
|
|
if (__pyx_v_info != NULL && __pyx_v_info->obj != NULL) {
|
|
__Pyx_GOTREF(__pyx_v_info->obj);
|
|
__Pyx_DECREF(__pyx_v_info->obj); __pyx_v_info->obj = NULL;
|
|
}
|
|
goto __pyx_L2;
|
|
__pyx_L0:;
|
|
if (__pyx_v_info != NULL && __pyx_v_info->obj == Py_None) {
|
|
__Pyx_GOTREF(Py_None);
|
|
__Pyx_DECREF(Py_None); __pyx_v_info->obj = NULL;
|
|
}
|
|
__pyx_L2:;
|
|
__Pyx_XDECREF((PyObject *)__pyx_v_descr);
|
|
__Pyx_RefNannyFinishContext();
|
|
return __pyx_r;
|
|
}
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":288
|
|
* f[0] = c'\0' # Terminate format string
|
|
*
|
|
* def __releasebuffer__(ndarray self, Py_buffer* info): # <<<<<<<<<<<<<<
|
|
* if PyArray_HASFIELDS(self):
|
|
* stdlib.free(info.format)
|
|
*/
|
|
|
|
/* Python wrapper */
|
|
static CYTHON_UNUSED void __pyx_pw_5numpy_7ndarray_3__releasebuffer__(PyObject *__pyx_v_self, Py_buffer *__pyx_v_info); /*proto*/
|
|
static CYTHON_UNUSED void __pyx_pw_5numpy_7ndarray_3__releasebuffer__(PyObject *__pyx_v_self, Py_buffer *__pyx_v_info) {
|
|
__Pyx_RefNannyDeclarations
|
|
__Pyx_RefNannySetupContext("__releasebuffer__ (wrapper)", 0);
|
|
__pyx_pf_5numpy_7ndarray_2__releasebuffer__(((PyArrayObject *)__pyx_v_self), ((Py_buffer *)__pyx_v_info));
|
|
|
|
/* function exit code */
|
|
__Pyx_RefNannyFinishContext();
|
|
}
|
|
|
|
static void __pyx_pf_5numpy_7ndarray_2__releasebuffer__(PyArrayObject *__pyx_v_self, Py_buffer *__pyx_v_info) {
|
|
__Pyx_RefNannyDeclarations
|
|
int __pyx_t_1;
|
|
__Pyx_RefNannySetupContext("__releasebuffer__", 0);
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":289
|
|
*
|
|
* def __releasebuffer__(ndarray self, Py_buffer* info):
|
|
* if PyArray_HASFIELDS(self): # <<<<<<<<<<<<<<
|
|
* stdlib.free(info.format)
|
|
* if sizeof(npy_intp) != sizeof(Py_ssize_t):
|
|
*/
|
|
__pyx_t_1 = (PyArray_HASFIELDS(__pyx_v_self) != 0);
|
|
if (__pyx_t_1) {
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":290
|
|
* def __releasebuffer__(ndarray self, Py_buffer* info):
|
|
* if PyArray_HASFIELDS(self):
|
|
* stdlib.free(info.format) # <<<<<<<<<<<<<<
|
|
* if sizeof(npy_intp) != sizeof(Py_ssize_t):
|
|
* stdlib.free(info.strides)
|
|
*/
|
|
free(__pyx_v_info->format);
|
|
goto __pyx_L3;
|
|
}
|
|
__pyx_L3:;
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":291
|
|
* if PyArray_HASFIELDS(self):
|
|
* stdlib.free(info.format)
|
|
* if sizeof(npy_intp) != sizeof(Py_ssize_t): # <<<<<<<<<<<<<<
|
|
* stdlib.free(info.strides)
|
|
* # info.shape was stored after info.strides in the same block
|
|
*/
|
|
__pyx_t_1 = (((sizeof(npy_intp)) != (sizeof(Py_ssize_t))) != 0);
|
|
if (__pyx_t_1) {
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":292
|
|
* stdlib.free(info.format)
|
|
* if sizeof(npy_intp) != sizeof(Py_ssize_t):
|
|
* stdlib.free(info.strides) # <<<<<<<<<<<<<<
|
|
* # info.shape was stored after info.strides in the same block
|
|
*
|
|
*/
|
|
free(__pyx_v_info->strides);
|
|
goto __pyx_L4;
|
|
}
|
|
__pyx_L4:;
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":288
|
|
* f[0] = c'\0' # Terminate format string
|
|
*
|
|
* def __releasebuffer__(ndarray self, Py_buffer* info): # <<<<<<<<<<<<<<
|
|
* if PyArray_HASFIELDS(self):
|
|
* stdlib.free(info.format)
|
|
*/
|
|
|
|
/* function exit code */
|
|
__Pyx_RefNannyFinishContext();
|
|
}
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":768
|
|
* ctypedef npy_cdouble complex_t
|
|
*
|
|
* cdef inline object PyArray_MultiIterNew1(a): # <<<<<<<<<<<<<<
|
|
* return PyArray_MultiIterNew(1, <void*>a)
|
|
*
|
|
*/
|
|
|
|
static CYTHON_INLINE PyObject *__pyx_f_5numpy_PyArray_MultiIterNew1(PyObject *__pyx_v_a) {
|
|
PyObject *__pyx_r = NULL;
|
|
__Pyx_RefNannyDeclarations
|
|
PyObject *__pyx_t_1 = NULL;
|
|
int __pyx_lineno = 0;
|
|
const char *__pyx_filename = NULL;
|
|
int __pyx_clineno = 0;
|
|
__Pyx_RefNannySetupContext("PyArray_MultiIterNew1", 0);
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":769
|
|
*
|
|
* cdef inline object PyArray_MultiIterNew1(a):
|
|
* return PyArray_MultiIterNew(1, <void*>a) # <<<<<<<<<<<<<<
|
|
*
|
|
* cdef inline object PyArray_MultiIterNew2(a, b):
|
|
*/
|
|
__Pyx_XDECREF(__pyx_r);
|
|
__pyx_t_1 = PyArray_MultiIterNew(1, ((void *)__pyx_v_a)); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 769; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_1);
|
|
__pyx_r = __pyx_t_1;
|
|
__pyx_t_1 = 0;
|
|
goto __pyx_L0;
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":768
|
|
* ctypedef npy_cdouble complex_t
|
|
*
|
|
* cdef inline object PyArray_MultiIterNew1(a): # <<<<<<<<<<<<<<
|
|
* return PyArray_MultiIterNew(1, <void*>a)
|
|
*
|
|
*/
|
|
|
|
/* function exit code */
|
|
__pyx_L1_error:;
|
|
__Pyx_XDECREF(__pyx_t_1);
|
|
__Pyx_AddTraceback("numpy.PyArray_MultiIterNew1", __pyx_clineno, __pyx_lineno, __pyx_filename);
|
|
__pyx_r = 0;
|
|
__pyx_L0:;
|
|
__Pyx_XGIVEREF(__pyx_r);
|
|
__Pyx_RefNannyFinishContext();
|
|
return __pyx_r;
|
|
}
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":771
|
|
* return PyArray_MultiIterNew(1, <void*>a)
|
|
*
|
|
* cdef inline object PyArray_MultiIterNew2(a, b): # <<<<<<<<<<<<<<
|
|
* return PyArray_MultiIterNew(2, <void*>a, <void*>b)
|
|
*
|
|
*/
|
|
|
|
static CYTHON_INLINE PyObject *__pyx_f_5numpy_PyArray_MultiIterNew2(PyObject *__pyx_v_a, PyObject *__pyx_v_b) {
|
|
PyObject *__pyx_r = NULL;
|
|
__Pyx_RefNannyDeclarations
|
|
PyObject *__pyx_t_1 = NULL;
|
|
int __pyx_lineno = 0;
|
|
const char *__pyx_filename = NULL;
|
|
int __pyx_clineno = 0;
|
|
__Pyx_RefNannySetupContext("PyArray_MultiIterNew2", 0);
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":772
|
|
*
|
|
* cdef inline object PyArray_MultiIterNew2(a, b):
|
|
* return PyArray_MultiIterNew(2, <void*>a, <void*>b) # <<<<<<<<<<<<<<
|
|
*
|
|
* cdef inline object PyArray_MultiIterNew3(a, b, c):
|
|
*/
|
|
__Pyx_XDECREF(__pyx_r);
|
|
__pyx_t_1 = PyArray_MultiIterNew(2, ((void *)__pyx_v_a), ((void *)__pyx_v_b)); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 772; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_1);
|
|
__pyx_r = __pyx_t_1;
|
|
__pyx_t_1 = 0;
|
|
goto __pyx_L0;
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":771
|
|
* return PyArray_MultiIterNew(1, <void*>a)
|
|
*
|
|
* cdef inline object PyArray_MultiIterNew2(a, b): # <<<<<<<<<<<<<<
|
|
* return PyArray_MultiIterNew(2, <void*>a, <void*>b)
|
|
*
|
|
*/
|
|
|
|
/* function exit code */
|
|
__pyx_L1_error:;
|
|
__Pyx_XDECREF(__pyx_t_1);
|
|
__Pyx_AddTraceback("numpy.PyArray_MultiIterNew2", __pyx_clineno, __pyx_lineno, __pyx_filename);
|
|
__pyx_r = 0;
|
|
__pyx_L0:;
|
|
__Pyx_XGIVEREF(__pyx_r);
|
|
__Pyx_RefNannyFinishContext();
|
|
return __pyx_r;
|
|
}
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":774
|
|
* return PyArray_MultiIterNew(2, <void*>a, <void*>b)
|
|
*
|
|
* cdef inline object PyArray_MultiIterNew3(a, b, c): # <<<<<<<<<<<<<<
|
|
* return PyArray_MultiIterNew(3, <void*>a, <void*>b, <void*> c)
|
|
*
|
|
*/
|
|
|
|
static CYTHON_INLINE PyObject *__pyx_f_5numpy_PyArray_MultiIterNew3(PyObject *__pyx_v_a, PyObject *__pyx_v_b, PyObject *__pyx_v_c) {
|
|
PyObject *__pyx_r = NULL;
|
|
__Pyx_RefNannyDeclarations
|
|
PyObject *__pyx_t_1 = NULL;
|
|
int __pyx_lineno = 0;
|
|
const char *__pyx_filename = NULL;
|
|
int __pyx_clineno = 0;
|
|
__Pyx_RefNannySetupContext("PyArray_MultiIterNew3", 0);
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":775
|
|
*
|
|
* cdef inline object PyArray_MultiIterNew3(a, b, c):
|
|
* return PyArray_MultiIterNew(3, <void*>a, <void*>b, <void*> c) # <<<<<<<<<<<<<<
|
|
*
|
|
* cdef inline object PyArray_MultiIterNew4(a, b, c, d):
|
|
*/
|
|
__Pyx_XDECREF(__pyx_r);
|
|
__pyx_t_1 = PyArray_MultiIterNew(3, ((void *)__pyx_v_a), ((void *)__pyx_v_b), ((void *)__pyx_v_c)); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 775; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_1);
|
|
__pyx_r = __pyx_t_1;
|
|
__pyx_t_1 = 0;
|
|
goto __pyx_L0;
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":774
|
|
* return PyArray_MultiIterNew(2, <void*>a, <void*>b)
|
|
*
|
|
* cdef inline object PyArray_MultiIterNew3(a, b, c): # <<<<<<<<<<<<<<
|
|
* return PyArray_MultiIterNew(3, <void*>a, <void*>b, <void*> c)
|
|
*
|
|
*/
|
|
|
|
/* function exit code */
|
|
__pyx_L1_error:;
|
|
__Pyx_XDECREF(__pyx_t_1);
|
|
__Pyx_AddTraceback("numpy.PyArray_MultiIterNew3", __pyx_clineno, __pyx_lineno, __pyx_filename);
|
|
__pyx_r = 0;
|
|
__pyx_L0:;
|
|
__Pyx_XGIVEREF(__pyx_r);
|
|
__Pyx_RefNannyFinishContext();
|
|
return __pyx_r;
|
|
}
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":777
|
|
* return PyArray_MultiIterNew(3, <void*>a, <void*>b, <void*> c)
|
|
*
|
|
* cdef inline object PyArray_MultiIterNew4(a, b, c, d): # <<<<<<<<<<<<<<
|
|
* return PyArray_MultiIterNew(4, <void*>a, <void*>b, <void*>c, <void*> d)
|
|
*
|
|
*/
|
|
|
|
static CYTHON_INLINE PyObject *__pyx_f_5numpy_PyArray_MultiIterNew4(PyObject *__pyx_v_a, PyObject *__pyx_v_b, PyObject *__pyx_v_c, PyObject *__pyx_v_d) {
|
|
PyObject *__pyx_r = NULL;
|
|
__Pyx_RefNannyDeclarations
|
|
PyObject *__pyx_t_1 = NULL;
|
|
int __pyx_lineno = 0;
|
|
const char *__pyx_filename = NULL;
|
|
int __pyx_clineno = 0;
|
|
__Pyx_RefNannySetupContext("PyArray_MultiIterNew4", 0);
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":778
|
|
*
|
|
* cdef inline object PyArray_MultiIterNew4(a, b, c, d):
|
|
* return PyArray_MultiIterNew(4, <void*>a, <void*>b, <void*>c, <void*> d) # <<<<<<<<<<<<<<
|
|
*
|
|
* cdef inline object PyArray_MultiIterNew5(a, b, c, d, e):
|
|
*/
|
|
__Pyx_XDECREF(__pyx_r);
|
|
__pyx_t_1 = PyArray_MultiIterNew(4, ((void *)__pyx_v_a), ((void *)__pyx_v_b), ((void *)__pyx_v_c), ((void *)__pyx_v_d)); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 778; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_1);
|
|
__pyx_r = __pyx_t_1;
|
|
__pyx_t_1 = 0;
|
|
goto __pyx_L0;
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":777
|
|
* return PyArray_MultiIterNew(3, <void*>a, <void*>b, <void*> c)
|
|
*
|
|
* cdef inline object PyArray_MultiIterNew4(a, b, c, d): # <<<<<<<<<<<<<<
|
|
* return PyArray_MultiIterNew(4, <void*>a, <void*>b, <void*>c, <void*> d)
|
|
*
|
|
*/
|
|
|
|
/* function exit code */
|
|
__pyx_L1_error:;
|
|
__Pyx_XDECREF(__pyx_t_1);
|
|
__Pyx_AddTraceback("numpy.PyArray_MultiIterNew4", __pyx_clineno, __pyx_lineno, __pyx_filename);
|
|
__pyx_r = 0;
|
|
__pyx_L0:;
|
|
__Pyx_XGIVEREF(__pyx_r);
|
|
__Pyx_RefNannyFinishContext();
|
|
return __pyx_r;
|
|
}
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":780
|
|
* return PyArray_MultiIterNew(4, <void*>a, <void*>b, <void*>c, <void*> d)
|
|
*
|
|
* cdef inline object PyArray_MultiIterNew5(a, b, c, d, e): # <<<<<<<<<<<<<<
|
|
* return PyArray_MultiIterNew(5, <void*>a, <void*>b, <void*>c, <void*> d, <void*> e)
|
|
*
|
|
*/
|
|
|
|
static CYTHON_INLINE PyObject *__pyx_f_5numpy_PyArray_MultiIterNew5(PyObject *__pyx_v_a, PyObject *__pyx_v_b, PyObject *__pyx_v_c, PyObject *__pyx_v_d, PyObject *__pyx_v_e) {
|
|
PyObject *__pyx_r = NULL;
|
|
__Pyx_RefNannyDeclarations
|
|
PyObject *__pyx_t_1 = NULL;
|
|
int __pyx_lineno = 0;
|
|
const char *__pyx_filename = NULL;
|
|
int __pyx_clineno = 0;
|
|
__Pyx_RefNannySetupContext("PyArray_MultiIterNew5", 0);
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":781
|
|
*
|
|
* cdef inline object PyArray_MultiIterNew5(a, b, c, d, e):
|
|
* return PyArray_MultiIterNew(5, <void*>a, <void*>b, <void*>c, <void*> d, <void*> e) # <<<<<<<<<<<<<<
|
|
*
|
|
* cdef inline char* _util_dtypestring(dtype descr, char* f, char* end, int* offset) except NULL:
|
|
*/
|
|
__Pyx_XDECREF(__pyx_r);
|
|
__pyx_t_1 = PyArray_MultiIterNew(5, ((void *)__pyx_v_a), ((void *)__pyx_v_b), ((void *)__pyx_v_c), ((void *)__pyx_v_d), ((void *)__pyx_v_e)); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 781; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_1);
|
|
__pyx_r = __pyx_t_1;
|
|
__pyx_t_1 = 0;
|
|
goto __pyx_L0;
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":780
|
|
* return PyArray_MultiIterNew(4, <void*>a, <void*>b, <void*>c, <void*> d)
|
|
*
|
|
* cdef inline object PyArray_MultiIterNew5(a, b, c, d, e): # <<<<<<<<<<<<<<
|
|
* return PyArray_MultiIterNew(5, <void*>a, <void*>b, <void*>c, <void*> d, <void*> e)
|
|
*
|
|
*/
|
|
|
|
/* function exit code */
|
|
__pyx_L1_error:;
|
|
__Pyx_XDECREF(__pyx_t_1);
|
|
__Pyx_AddTraceback("numpy.PyArray_MultiIterNew5", __pyx_clineno, __pyx_lineno, __pyx_filename);
|
|
__pyx_r = 0;
|
|
__pyx_L0:;
|
|
__Pyx_XGIVEREF(__pyx_r);
|
|
__Pyx_RefNannyFinishContext();
|
|
return __pyx_r;
|
|
}
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":783
|
|
* return PyArray_MultiIterNew(5, <void*>a, <void*>b, <void*>c, <void*> d, <void*> e)
|
|
*
|
|
* cdef inline char* _util_dtypestring(dtype descr, char* f, char* end, int* offset) except NULL: # <<<<<<<<<<<<<<
|
|
* # Recursive utility function used in __getbuffer__ to get format
|
|
* # string. The new location in the format string is returned.
|
|
*/
|
|
|
|
static CYTHON_INLINE char *__pyx_f_5numpy__util_dtypestring(PyArray_Descr *__pyx_v_descr, char *__pyx_v_f, char *__pyx_v_end, int *__pyx_v_offset) {
|
|
PyArray_Descr *__pyx_v_child = 0;
|
|
int __pyx_v_endian_detector;
|
|
int __pyx_v_little_endian;
|
|
PyObject *__pyx_v_fields = 0;
|
|
PyObject *__pyx_v_childname = NULL;
|
|
PyObject *__pyx_v_new_offset = NULL;
|
|
PyObject *__pyx_v_t = NULL;
|
|
char *__pyx_r;
|
|
__Pyx_RefNannyDeclarations
|
|
PyObject *__pyx_t_1 = NULL;
|
|
Py_ssize_t __pyx_t_2;
|
|
PyObject *__pyx_t_3 = NULL;
|
|
PyObject *__pyx_t_4 = NULL;
|
|
int __pyx_t_5;
|
|
int __pyx_t_6;
|
|
int __pyx_t_7;
|
|
int __pyx_t_8;
|
|
int __pyx_t_9;
|
|
long __pyx_t_10;
|
|
char *__pyx_t_11;
|
|
int __pyx_lineno = 0;
|
|
const char *__pyx_filename = NULL;
|
|
int __pyx_clineno = 0;
|
|
__Pyx_RefNannySetupContext("_util_dtypestring", 0);
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":790
|
|
* cdef int delta_offset
|
|
* cdef tuple i
|
|
* cdef int endian_detector = 1 # <<<<<<<<<<<<<<
|
|
* cdef bint little_endian = ((<char*>&endian_detector)[0] != 0)
|
|
* cdef tuple fields
|
|
*/
|
|
__pyx_v_endian_detector = 1;
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":791
|
|
* cdef tuple i
|
|
* cdef int endian_detector = 1
|
|
* cdef bint little_endian = ((<char*>&endian_detector)[0] != 0) # <<<<<<<<<<<<<<
|
|
* cdef tuple fields
|
|
*
|
|
*/
|
|
__pyx_v_little_endian = ((((char *)(&__pyx_v_endian_detector))[0]) != 0);
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":794
|
|
* cdef tuple fields
|
|
*
|
|
* for childname in descr.names: # <<<<<<<<<<<<<<
|
|
* fields = descr.fields[childname]
|
|
* child, new_offset = fields
|
|
*/
|
|
if (unlikely(__pyx_v_descr->names == Py_None)) {
|
|
PyErr_SetString(PyExc_TypeError, "'NoneType' object is not iterable");
|
|
{__pyx_filename = __pyx_f[1]; __pyx_lineno = 794; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
}
|
|
__pyx_t_1 = __pyx_v_descr->names; __Pyx_INCREF(__pyx_t_1); __pyx_t_2 = 0;
|
|
for (;;) {
|
|
if (__pyx_t_2 >= PyTuple_GET_SIZE(__pyx_t_1)) break;
|
|
#if CYTHON_COMPILING_IN_CPYTHON
|
|
__pyx_t_3 = PyTuple_GET_ITEM(__pyx_t_1, __pyx_t_2); __Pyx_INCREF(__pyx_t_3); __pyx_t_2++; if (unlikely(0 < 0)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 794; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
#else
|
|
__pyx_t_3 = PySequence_ITEM(__pyx_t_1, __pyx_t_2); __pyx_t_2++; if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 794; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
#endif
|
|
__Pyx_XDECREF_SET(__pyx_v_childname, __pyx_t_3);
|
|
__pyx_t_3 = 0;
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":795
|
|
*
|
|
* for childname in descr.names:
|
|
* fields = descr.fields[childname] # <<<<<<<<<<<<<<
|
|
* child, new_offset = fields
|
|
*
|
|
*/
|
|
__pyx_t_3 = PyObject_GetItem(__pyx_v_descr->fields, __pyx_v_childname); if (unlikely(__pyx_t_3 == NULL)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 795; __pyx_clineno = __LINE__; goto __pyx_L1_error;};
|
|
__Pyx_GOTREF(__pyx_t_3);
|
|
if (!(likely(PyTuple_CheckExact(__pyx_t_3))||((__pyx_t_3) == Py_None)||(PyErr_Format(PyExc_TypeError, "Expected %.16s, got %.200s", "tuple", Py_TYPE(__pyx_t_3)->tp_name), 0))) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 795; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_XDECREF_SET(__pyx_v_fields, ((PyObject*)__pyx_t_3));
|
|
__pyx_t_3 = 0;
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":796
|
|
* for childname in descr.names:
|
|
* fields = descr.fields[childname]
|
|
* child, new_offset = fields # <<<<<<<<<<<<<<
|
|
*
|
|
* if (end - f) - <int>(new_offset - offset[0]) < 15:
|
|
*/
|
|
if (likely(__pyx_v_fields != Py_None)) {
|
|
PyObject* sequence = __pyx_v_fields;
|
|
#if CYTHON_COMPILING_IN_CPYTHON
|
|
Py_ssize_t size = Py_SIZE(sequence);
|
|
#else
|
|
Py_ssize_t size = PySequence_Size(sequence);
|
|
#endif
|
|
if (unlikely(size != 2)) {
|
|
if (size > 2) __Pyx_RaiseTooManyValuesError(2);
|
|
else if (size >= 0) __Pyx_RaiseNeedMoreValuesError(size);
|
|
{__pyx_filename = __pyx_f[1]; __pyx_lineno = 796; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
}
|
|
#if CYTHON_COMPILING_IN_CPYTHON
|
|
__pyx_t_3 = PyTuple_GET_ITEM(sequence, 0);
|
|
__pyx_t_4 = PyTuple_GET_ITEM(sequence, 1);
|
|
__Pyx_INCREF(__pyx_t_3);
|
|
__Pyx_INCREF(__pyx_t_4);
|
|
#else
|
|
__pyx_t_3 = PySequence_ITEM(sequence, 0); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 796; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_3);
|
|
__pyx_t_4 = PySequence_ITEM(sequence, 1); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 796; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_4);
|
|
#endif
|
|
} else {
|
|
__Pyx_RaiseNoneNotIterableError(); {__pyx_filename = __pyx_f[1]; __pyx_lineno = 796; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
}
|
|
if (!(likely(((__pyx_t_3) == Py_None) || likely(__Pyx_TypeTest(__pyx_t_3, __pyx_ptype_5numpy_dtype))))) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 796; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_XDECREF_SET(__pyx_v_child, ((PyArray_Descr *)__pyx_t_3));
|
|
__pyx_t_3 = 0;
|
|
__Pyx_XDECREF_SET(__pyx_v_new_offset, __pyx_t_4);
|
|
__pyx_t_4 = 0;
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":798
|
|
* child, new_offset = fields
|
|
*
|
|
* if (end - f) - <int>(new_offset - offset[0]) < 15: # <<<<<<<<<<<<<<
|
|
* raise RuntimeError(u"Format string allocated too short, see comment in numpy.pxd")
|
|
*
|
|
*/
|
|
__pyx_t_4 = __Pyx_PyInt_From_int((__pyx_v_offset[0])); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 798; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_4);
|
|
__pyx_t_3 = PyNumber_Subtract(__pyx_v_new_offset, __pyx_t_4); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 798; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_3);
|
|
__Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0;
|
|
__pyx_t_5 = __Pyx_PyInt_As_int(__pyx_t_3); if (unlikely((__pyx_t_5 == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 798; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0;
|
|
__pyx_t_6 = ((((__pyx_v_end - __pyx_v_f) - ((int)__pyx_t_5)) < 15) != 0);
|
|
if (__pyx_t_6) {
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":799
|
|
*
|
|
* if (end - f) - <int>(new_offset - offset[0]) < 15:
|
|
* raise RuntimeError(u"Format string allocated too short, see comment in numpy.pxd") # <<<<<<<<<<<<<<
|
|
*
|
|
* if ((child.byteorder == c'>' and little_endian) or
|
|
*/
|
|
__pyx_t_3 = __Pyx_PyObject_Call(__pyx_builtin_RuntimeError, __pyx_tuple__32, NULL); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 799; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_3);
|
|
__Pyx_Raise(__pyx_t_3, 0, 0, 0);
|
|
__Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0;
|
|
{__pyx_filename = __pyx_f[1]; __pyx_lineno = 799; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
}
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":801
|
|
* raise RuntimeError(u"Format string allocated too short, see comment in numpy.pxd")
|
|
*
|
|
* if ((child.byteorder == c'>' and little_endian) or # <<<<<<<<<<<<<<
|
|
* (child.byteorder == c'<' and not little_endian)):
|
|
* raise ValueError(u"Non-native byte order not supported")
|
|
*/
|
|
__pyx_t_6 = ((__pyx_v_child->byteorder == '>') != 0);
|
|
if (__pyx_t_6) {
|
|
__pyx_t_7 = (__pyx_v_little_endian != 0);
|
|
} else {
|
|
__pyx_t_7 = __pyx_t_6;
|
|
}
|
|
if (!__pyx_t_7) {
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":802
|
|
*
|
|
* if ((child.byteorder == c'>' and little_endian) or
|
|
* (child.byteorder == c'<' and not little_endian)): # <<<<<<<<<<<<<<
|
|
* raise ValueError(u"Non-native byte order not supported")
|
|
* # One could encode it in the format string and have Cython
|
|
*/
|
|
__pyx_t_6 = ((__pyx_v_child->byteorder == '<') != 0);
|
|
if (__pyx_t_6) {
|
|
__pyx_t_8 = ((!(__pyx_v_little_endian != 0)) != 0);
|
|
__pyx_t_9 = __pyx_t_8;
|
|
} else {
|
|
__pyx_t_9 = __pyx_t_6;
|
|
}
|
|
__pyx_t_6 = __pyx_t_9;
|
|
} else {
|
|
__pyx_t_6 = __pyx_t_7;
|
|
}
|
|
if (__pyx_t_6) {
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":803
|
|
* if ((child.byteorder == c'>' and little_endian) or
|
|
* (child.byteorder == c'<' and not little_endian)):
|
|
* raise ValueError(u"Non-native byte order not supported") # <<<<<<<<<<<<<<
|
|
* # One could encode it in the format string and have Cython
|
|
* # complain instead, BUT: < and > in format strings also imply
|
|
*/
|
|
__pyx_t_3 = __Pyx_PyObject_Call(__pyx_builtin_ValueError, __pyx_tuple__33, NULL); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 803; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_3);
|
|
__Pyx_Raise(__pyx_t_3, 0, 0, 0);
|
|
__Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0;
|
|
{__pyx_filename = __pyx_f[1]; __pyx_lineno = 803; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
}
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":813
|
|
*
|
|
* # Output padding bytes
|
|
* while offset[0] < new_offset: # <<<<<<<<<<<<<<
|
|
* f[0] = 120 # "x"; pad byte
|
|
* f += 1
|
|
*/
|
|
while (1) {
|
|
__pyx_t_3 = __Pyx_PyInt_From_int((__pyx_v_offset[0])); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 813; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_3);
|
|
__pyx_t_4 = PyObject_RichCompare(__pyx_t_3, __pyx_v_new_offset, Py_LT); __Pyx_XGOTREF(__pyx_t_4); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 813; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0;
|
|
__pyx_t_6 = __Pyx_PyObject_IsTrue(__pyx_t_4); if (unlikely(__pyx_t_6 < 0)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 813; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0;
|
|
if (!__pyx_t_6) break;
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":814
|
|
* # Output padding bytes
|
|
* while offset[0] < new_offset:
|
|
* f[0] = 120 # "x"; pad byte # <<<<<<<<<<<<<<
|
|
* f += 1
|
|
* offset[0] += 1
|
|
*/
|
|
(__pyx_v_f[0]) = 120;
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":815
|
|
* while offset[0] < new_offset:
|
|
* f[0] = 120 # "x"; pad byte
|
|
* f += 1 # <<<<<<<<<<<<<<
|
|
* offset[0] += 1
|
|
*
|
|
*/
|
|
__pyx_v_f = (__pyx_v_f + 1);
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":816
|
|
* f[0] = 120 # "x"; pad byte
|
|
* f += 1
|
|
* offset[0] += 1 # <<<<<<<<<<<<<<
|
|
*
|
|
* offset[0] += child.itemsize
|
|
*/
|
|
__pyx_t_10 = 0;
|
|
(__pyx_v_offset[__pyx_t_10]) = ((__pyx_v_offset[__pyx_t_10]) + 1);
|
|
}
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":818
|
|
* offset[0] += 1
|
|
*
|
|
* offset[0] += child.itemsize # <<<<<<<<<<<<<<
|
|
*
|
|
* if not PyDataType_HASFIELDS(child):
|
|
*/
|
|
__pyx_t_10 = 0;
|
|
(__pyx_v_offset[__pyx_t_10]) = ((__pyx_v_offset[__pyx_t_10]) + __pyx_v_child->elsize);
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":820
|
|
* offset[0] += child.itemsize
|
|
*
|
|
* if not PyDataType_HASFIELDS(child): # <<<<<<<<<<<<<<
|
|
* t = child.type_num
|
|
* if end - f < 5:
|
|
*/
|
|
__pyx_t_6 = ((!(PyDataType_HASFIELDS(__pyx_v_child) != 0)) != 0);
|
|
if (__pyx_t_6) {
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":821
|
|
*
|
|
* if not PyDataType_HASFIELDS(child):
|
|
* t = child.type_num # <<<<<<<<<<<<<<
|
|
* if end - f < 5:
|
|
* raise RuntimeError(u"Format string allocated too short.")
|
|
*/
|
|
__pyx_t_4 = __Pyx_PyInt_From_int(__pyx_v_child->type_num); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 821; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_4);
|
|
__Pyx_XDECREF_SET(__pyx_v_t, __pyx_t_4);
|
|
__pyx_t_4 = 0;
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":822
|
|
* if not PyDataType_HASFIELDS(child):
|
|
* t = child.type_num
|
|
* if end - f < 5: # <<<<<<<<<<<<<<
|
|
* raise RuntimeError(u"Format string allocated too short.")
|
|
*
|
|
*/
|
|
__pyx_t_6 = (((__pyx_v_end - __pyx_v_f) < 5) != 0);
|
|
if (__pyx_t_6) {
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":823
|
|
* t = child.type_num
|
|
* if end - f < 5:
|
|
* raise RuntimeError(u"Format string allocated too short.") # <<<<<<<<<<<<<<
|
|
*
|
|
* # Until ticket #99 is fixed, use integers to avoid warnings
|
|
*/
|
|
__pyx_t_4 = __Pyx_PyObject_Call(__pyx_builtin_RuntimeError, __pyx_tuple__34, NULL); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 823; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_4);
|
|
__Pyx_Raise(__pyx_t_4, 0, 0, 0);
|
|
__Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0;
|
|
{__pyx_filename = __pyx_f[1]; __pyx_lineno = 823; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
}
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":826
|
|
*
|
|
* # Until ticket #99 is fixed, use integers to avoid warnings
|
|
* if t == NPY_BYTE: f[0] = 98 #"b" # <<<<<<<<<<<<<<
|
|
* elif t == NPY_UBYTE: f[0] = 66 #"B"
|
|
* elif t == NPY_SHORT: f[0] = 104 #"h"
|
|
*/
|
|
__pyx_t_4 = PyInt_FromLong(NPY_BYTE); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 826; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_4);
|
|
__pyx_t_3 = PyObject_RichCompare(__pyx_v_t, __pyx_t_4, Py_EQ); __Pyx_XGOTREF(__pyx_t_3); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 826; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0;
|
|
__pyx_t_6 = __Pyx_PyObject_IsTrue(__pyx_t_3); if (unlikely(__pyx_t_6 < 0)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 826; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0;
|
|
if (__pyx_t_6) {
|
|
(__pyx_v_f[0]) = 98;
|
|
goto __pyx_L11;
|
|
}
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":827
|
|
* # Until ticket #99 is fixed, use integers to avoid warnings
|
|
* if t == NPY_BYTE: f[0] = 98 #"b"
|
|
* elif t == NPY_UBYTE: f[0] = 66 #"B" # <<<<<<<<<<<<<<
|
|
* elif t == NPY_SHORT: f[0] = 104 #"h"
|
|
* elif t == NPY_USHORT: f[0] = 72 #"H"
|
|
*/
|
|
__pyx_t_3 = PyInt_FromLong(NPY_UBYTE); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 827; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_3);
|
|
__pyx_t_4 = PyObject_RichCompare(__pyx_v_t, __pyx_t_3, Py_EQ); __Pyx_XGOTREF(__pyx_t_4); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 827; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0;
|
|
__pyx_t_6 = __Pyx_PyObject_IsTrue(__pyx_t_4); if (unlikely(__pyx_t_6 < 0)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 827; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0;
|
|
if (__pyx_t_6) {
|
|
(__pyx_v_f[0]) = 66;
|
|
goto __pyx_L11;
|
|
}
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":828
|
|
* if t == NPY_BYTE: f[0] = 98 #"b"
|
|
* elif t == NPY_UBYTE: f[0] = 66 #"B"
|
|
* elif t == NPY_SHORT: f[0] = 104 #"h" # <<<<<<<<<<<<<<
|
|
* elif t == NPY_USHORT: f[0] = 72 #"H"
|
|
* elif t == NPY_INT: f[0] = 105 #"i"
|
|
*/
|
|
__pyx_t_4 = PyInt_FromLong(NPY_SHORT); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 828; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_4);
|
|
__pyx_t_3 = PyObject_RichCompare(__pyx_v_t, __pyx_t_4, Py_EQ); __Pyx_XGOTREF(__pyx_t_3); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 828; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0;
|
|
__pyx_t_6 = __Pyx_PyObject_IsTrue(__pyx_t_3); if (unlikely(__pyx_t_6 < 0)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 828; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0;
|
|
if (__pyx_t_6) {
|
|
(__pyx_v_f[0]) = 104;
|
|
goto __pyx_L11;
|
|
}
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":829
|
|
* elif t == NPY_UBYTE: f[0] = 66 #"B"
|
|
* elif t == NPY_SHORT: f[0] = 104 #"h"
|
|
* elif t == NPY_USHORT: f[0] = 72 #"H" # <<<<<<<<<<<<<<
|
|
* elif t == NPY_INT: f[0] = 105 #"i"
|
|
* elif t == NPY_UINT: f[0] = 73 #"I"
|
|
*/
|
|
__pyx_t_3 = PyInt_FromLong(NPY_USHORT); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 829; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_3);
|
|
__pyx_t_4 = PyObject_RichCompare(__pyx_v_t, __pyx_t_3, Py_EQ); __Pyx_XGOTREF(__pyx_t_4); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 829; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0;
|
|
__pyx_t_6 = __Pyx_PyObject_IsTrue(__pyx_t_4); if (unlikely(__pyx_t_6 < 0)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 829; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0;
|
|
if (__pyx_t_6) {
|
|
(__pyx_v_f[0]) = 72;
|
|
goto __pyx_L11;
|
|
}
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":830
|
|
* elif t == NPY_SHORT: f[0] = 104 #"h"
|
|
* elif t == NPY_USHORT: f[0] = 72 #"H"
|
|
* elif t == NPY_INT: f[0] = 105 #"i" # <<<<<<<<<<<<<<
|
|
* elif t == NPY_UINT: f[0] = 73 #"I"
|
|
* elif t == NPY_LONG: f[0] = 108 #"l"
|
|
*/
|
|
__pyx_t_4 = PyInt_FromLong(NPY_INT); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 830; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_4);
|
|
__pyx_t_3 = PyObject_RichCompare(__pyx_v_t, __pyx_t_4, Py_EQ); __Pyx_XGOTREF(__pyx_t_3); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 830; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0;
|
|
__pyx_t_6 = __Pyx_PyObject_IsTrue(__pyx_t_3); if (unlikely(__pyx_t_6 < 0)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 830; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0;
|
|
if (__pyx_t_6) {
|
|
(__pyx_v_f[0]) = 105;
|
|
goto __pyx_L11;
|
|
}
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":831
|
|
* elif t == NPY_USHORT: f[0] = 72 #"H"
|
|
* elif t == NPY_INT: f[0] = 105 #"i"
|
|
* elif t == NPY_UINT: f[0] = 73 #"I" # <<<<<<<<<<<<<<
|
|
* elif t == NPY_LONG: f[0] = 108 #"l"
|
|
* elif t == NPY_ULONG: f[0] = 76 #"L"
|
|
*/
|
|
__pyx_t_3 = PyInt_FromLong(NPY_UINT); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 831; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_3);
|
|
__pyx_t_4 = PyObject_RichCompare(__pyx_v_t, __pyx_t_3, Py_EQ); __Pyx_XGOTREF(__pyx_t_4); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 831; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0;
|
|
__pyx_t_6 = __Pyx_PyObject_IsTrue(__pyx_t_4); if (unlikely(__pyx_t_6 < 0)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 831; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0;
|
|
if (__pyx_t_6) {
|
|
(__pyx_v_f[0]) = 73;
|
|
goto __pyx_L11;
|
|
}
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":832
|
|
* elif t == NPY_INT: f[0] = 105 #"i"
|
|
* elif t == NPY_UINT: f[0] = 73 #"I"
|
|
* elif t == NPY_LONG: f[0] = 108 #"l" # <<<<<<<<<<<<<<
|
|
* elif t == NPY_ULONG: f[0] = 76 #"L"
|
|
* elif t == NPY_LONGLONG: f[0] = 113 #"q"
|
|
*/
|
|
__pyx_t_4 = PyInt_FromLong(NPY_LONG); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 832; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_4);
|
|
__pyx_t_3 = PyObject_RichCompare(__pyx_v_t, __pyx_t_4, Py_EQ); __Pyx_XGOTREF(__pyx_t_3); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 832; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0;
|
|
__pyx_t_6 = __Pyx_PyObject_IsTrue(__pyx_t_3); if (unlikely(__pyx_t_6 < 0)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 832; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0;
|
|
if (__pyx_t_6) {
|
|
(__pyx_v_f[0]) = 108;
|
|
goto __pyx_L11;
|
|
}
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":833
|
|
* elif t == NPY_UINT: f[0] = 73 #"I"
|
|
* elif t == NPY_LONG: f[0] = 108 #"l"
|
|
* elif t == NPY_ULONG: f[0] = 76 #"L" # <<<<<<<<<<<<<<
|
|
* elif t == NPY_LONGLONG: f[0] = 113 #"q"
|
|
* elif t == NPY_ULONGLONG: f[0] = 81 #"Q"
|
|
*/
|
|
__pyx_t_3 = PyInt_FromLong(NPY_ULONG); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 833; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_3);
|
|
__pyx_t_4 = PyObject_RichCompare(__pyx_v_t, __pyx_t_3, Py_EQ); __Pyx_XGOTREF(__pyx_t_4); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 833; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0;
|
|
__pyx_t_6 = __Pyx_PyObject_IsTrue(__pyx_t_4); if (unlikely(__pyx_t_6 < 0)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 833; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0;
|
|
if (__pyx_t_6) {
|
|
(__pyx_v_f[0]) = 76;
|
|
goto __pyx_L11;
|
|
}
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":834
|
|
* elif t == NPY_LONG: f[0] = 108 #"l"
|
|
* elif t == NPY_ULONG: f[0] = 76 #"L"
|
|
* elif t == NPY_LONGLONG: f[0] = 113 #"q" # <<<<<<<<<<<<<<
|
|
* elif t == NPY_ULONGLONG: f[0] = 81 #"Q"
|
|
* elif t == NPY_FLOAT: f[0] = 102 #"f"
|
|
*/
|
|
__pyx_t_4 = PyInt_FromLong(NPY_LONGLONG); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 834; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_4);
|
|
__pyx_t_3 = PyObject_RichCompare(__pyx_v_t, __pyx_t_4, Py_EQ); __Pyx_XGOTREF(__pyx_t_3); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 834; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0;
|
|
__pyx_t_6 = __Pyx_PyObject_IsTrue(__pyx_t_3); if (unlikely(__pyx_t_6 < 0)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 834; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0;
|
|
if (__pyx_t_6) {
|
|
(__pyx_v_f[0]) = 113;
|
|
goto __pyx_L11;
|
|
}
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":835
|
|
* elif t == NPY_ULONG: f[0] = 76 #"L"
|
|
* elif t == NPY_LONGLONG: f[0] = 113 #"q"
|
|
* elif t == NPY_ULONGLONG: f[0] = 81 #"Q" # <<<<<<<<<<<<<<
|
|
* elif t == NPY_FLOAT: f[0] = 102 #"f"
|
|
* elif t == NPY_DOUBLE: f[0] = 100 #"d"
|
|
*/
|
|
__pyx_t_3 = PyInt_FromLong(NPY_ULONGLONG); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 835; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_3);
|
|
__pyx_t_4 = PyObject_RichCompare(__pyx_v_t, __pyx_t_3, Py_EQ); __Pyx_XGOTREF(__pyx_t_4); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 835; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0;
|
|
__pyx_t_6 = __Pyx_PyObject_IsTrue(__pyx_t_4); if (unlikely(__pyx_t_6 < 0)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 835; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0;
|
|
if (__pyx_t_6) {
|
|
(__pyx_v_f[0]) = 81;
|
|
goto __pyx_L11;
|
|
}
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":836
|
|
* elif t == NPY_LONGLONG: f[0] = 113 #"q"
|
|
* elif t == NPY_ULONGLONG: f[0] = 81 #"Q"
|
|
* elif t == NPY_FLOAT: f[0] = 102 #"f" # <<<<<<<<<<<<<<
|
|
* elif t == NPY_DOUBLE: f[0] = 100 #"d"
|
|
* elif t == NPY_LONGDOUBLE: f[0] = 103 #"g"
|
|
*/
|
|
__pyx_t_4 = PyInt_FromLong(NPY_FLOAT); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 836; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_4);
|
|
__pyx_t_3 = PyObject_RichCompare(__pyx_v_t, __pyx_t_4, Py_EQ); __Pyx_XGOTREF(__pyx_t_3); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 836; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0;
|
|
__pyx_t_6 = __Pyx_PyObject_IsTrue(__pyx_t_3); if (unlikely(__pyx_t_6 < 0)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 836; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0;
|
|
if (__pyx_t_6) {
|
|
(__pyx_v_f[0]) = 102;
|
|
goto __pyx_L11;
|
|
}
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":837
|
|
* elif t == NPY_ULONGLONG: f[0] = 81 #"Q"
|
|
* elif t == NPY_FLOAT: f[0] = 102 #"f"
|
|
* elif t == NPY_DOUBLE: f[0] = 100 #"d" # <<<<<<<<<<<<<<
|
|
* elif t == NPY_LONGDOUBLE: f[0] = 103 #"g"
|
|
* elif t == NPY_CFLOAT: f[0] = 90; f[1] = 102; f += 1 # Zf
|
|
*/
|
|
__pyx_t_3 = PyInt_FromLong(NPY_DOUBLE); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 837; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_3);
|
|
__pyx_t_4 = PyObject_RichCompare(__pyx_v_t, __pyx_t_3, Py_EQ); __Pyx_XGOTREF(__pyx_t_4); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 837; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0;
|
|
__pyx_t_6 = __Pyx_PyObject_IsTrue(__pyx_t_4); if (unlikely(__pyx_t_6 < 0)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 837; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0;
|
|
if (__pyx_t_6) {
|
|
(__pyx_v_f[0]) = 100;
|
|
goto __pyx_L11;
|
|
}
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":838
|
|
* elif t == NPY_FLOAT: f[0] = 102 #"f"
|
|
* elif t == NPY_DOUBLE: f[0] = 100 #"d"
|
|
* elif t == NPY_LONGDOUBLE: f[0] = 103 #"g" # <<<<<<<<<<<<<<
|
|
* elif t == NPY_CFLOAT: f[0] = 90; f[1] = 102; f += 1 # Zf
|
|
* elif t == NPY_CDOUBLE: f[0] = 90; f[1] = 100; f += 1 # Zd
|
|
*/
|
|
__pyx_t_4 = PyInt_FromLong(NPY_LONGDOUBLE); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 838; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_4);
|
|
__pyx_t_3 = PyObject_RichCompare(__pyx_v_t, __pyx_t_4, Py_EQ); __Pyx_XGOTREF(__pyx_t_3); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 838; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0;
|
|
__pyx_t_6 = __Pyx_PyObject_IsTrue(__pyx_t_3); if (unlikely(__pyx_t_6 < 0)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 838; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0;
|
|
if (__pyx_t_6) {
|
|
(__pyx_v_f[0]) = 103;
|
|
goto __pyx_L11;
|
|
}
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":839
|
|
* elif t == NPY_DOUBLE: f[0] = 100 #"d"
|
|
* elif t == NPY_LONGDOUBLE: f[0] = 103 #"g"
|
|
* elif t == NPY_CFLOAT: f[0] = 90; f[1] = 102; f += 1 # Zf # <<<<<<<<<<<<<<
|
|
* elif t == NPY_CDOUBLE: f[0] = 90; f[1] = 100; f += 1 # Zd
|
|
* elif t == NPY_CLONGDOUBLE: f[0] = 90; f[1] = 103; f += 1 # Zg
|
|
*/
|
|
__pyx_t_3 = PyInt_FromLong(NPY_CFLOAT); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 839; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_3);
|
|
__pyx_t_4 = PyObject_RichCompare(__pyx_v_t, __pyx_t_3, Py_EQ); __Pyx_XGOTREF(__pyx_t_4); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 839; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0;
|
|
__pyx_t_6 = __Pyx_PyObject_IsTrue(__pyx_t_4); if (unlikely(__pyx_t_6 < 0)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 839; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0;
|
|
if (__pyx_t_6) {
|
|
(__pyx_v_f[0]) = 90;
|
|
(__pyx_v_f[1]) = 102;
|
|
__pyx_v_f = (__pyx_v_f + 1);
|
|
goto __pyx_L11;
|
|
}
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":840
|
|
* elif t == NPY_LONGDOUBLE: f[0] = 103 #"g"
|
|
* elif t == NPY_CFLOAT: f[0] = 90; f[1] = 102; f += 1 # Zf
|
|
* elif t == NPY_CDOUBLE: f[0] = 90; f[1] = 100; f += 1 # Zd # <<<<<<<<<<<<<<
|
|
* elif t == NPY_CLONGDOUBLE: f[0] = 90; f[1] = 103; f += 1 # Zg
|
|
* elif t == NPY_OBJECT: f[0] = 79 #"O"
|
|
*/
|
|
__pyx_t_4 = PyInt_FromLong(NPY_CDOUBLE); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 840; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_4);
|
|
__pyx_t_3 = PyObject_RichCompare(__pyx_v_t, __pyx_t_4, Py_EQ); __Pyx_XGOTREF(__pyx_t_3); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 840; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0;
|
|
__pyx_t_6 = __Pyx_PyObject_IsTrue(__pyx_t_3); if (unlikely(__pyx_t_6 < 0)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 840; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0;
|
|
if (__pyx_t_6) {
|
|
(__pyx_v_f[0]) = 90;
|
|
(__pyx_v_f[1]) = 100;
|
|
__pyx_v_f = (__pyx_v_f + 1);
|
|
goto __pyx_L11;
|
|
}
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":841
|
|
* elif t == NPY_CFLOAT: f[0] = 90; f[1] = 102; f += 1 # Zf
|
|
* elif t == NPY_CDOUBLE: f[0] = 90; f[1] = 100; f += 1 # Zd
|
|
* elif t == NPY_CLONGDOUBLE: f[0] = 90; f[1] = 103; f += 1 # Zg # <<<<<<<<<<<<<<
|
|
* elif t == NPY_OBJECT: f[0] = 79 #"O"
|
|
* else:
|
|
*/
|
|
__pyx_t_3 = PyInt_FromLong(NPY_CLONGDOUBLE); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 841; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_3);
|
|
__pyx_t_4 = PyObject_RichCompare(__pyx_v_t, __pyx_t_3, Py_EQ); __Pyx_XGOTREF(__pyx_t_4); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 841; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0;
|
|
__pyx_t_6 = __Pyx_PyObject_IsTrue(__pyx_t_4); if (unlikely(__pyx_t_6 < 0)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 841; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0;
|
|
if (__pyx_t_6) {
|
|
(__pyx_v_f[0]) = 90;
|
|
(__pyx_v_f[1]) = 103;
|
|
__pyx_v_f = (__pyx_v_f + 1);
|
|
goto __pyx_L11;
|
|
}
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":842
|
|
* elif t == NPY_CDOUBLE: f[0] = 90; f[1] = 100; f += 1 # Zd
|
|
* elif t == NPY_CLONGDOUBLE: f[0] = 90; f[1] = 103; f += 1 # Zg
|
|
* elif t == NPY_OBJECT: f[0] = 79 #"O" # <<<<<<<<<<<<<<
|
|
* else:
|
|
* raise ValueError(u"unknown dtype code in numpy.pxd (%d)" % t)
|
|
*/
|
|
__pyx_t_4 = PyInt_FromLong(NPY_OBJECT); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 842; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_4);
|
|
__pyx_t_3 = PyObject_RichCompare(__pyx_v_t, __pyx_t_4, Py_EQ); __Pyx_XGOTREF(__pyx_t_3); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 842; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0;
|
|
__pyx_t_6 = __Pyx_PyObject_IsTrue(__pyx_t_3); if (unlikely(__pyx_t_6 < 0)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 842; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0;
|
|
if (__pyx_t_6) {
|
|
(__pyx_v_f[0]) = 79;
|
|
goto __pyx_L11;
|
|
}
|
|
/*else*/ {
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":844
|
|
* elif t == NPY_OBJECT: f[0] = 79 #"O"
|
|
* else:
|
|
* raise ValueError(u"unknown dtype code in numpy.pxd (%d)" % t) # <<<<<<<<<<<<<<
|
|
* f += 1
|
|
* else:
|
|
*/
|
|
__pyx_t_3 = PyUnicode_Format(__pyx_kp_u_unknown_dtype_code_in_numpy_pxd, __pyx_v_t); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 844; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_3);
|
|
__pyx_t_4 = PyTuple_New(1); if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 844; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_4);
|
|
PyTuple_SET_ITEM(__pyx_t_4, 0, __pyx_t_3);
|
|
__Pyx_GIVEREF(__pyx_t_3);
|
|
__pyx_t_3 = 0;
|
|
__pyx_t_3 = __Pyx_PyObject_Call(__pyx_builtin_ValueError, __pyx_t_4, NULL); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 844; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_3);
|
|
__Pyx_DECREF(__pyx_t_4); __pyx_t_4 = 0;
|
|
__Pyx_Raise(__pyx_t_3, 0, 0, 0);
|
|
__Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0;
|
|
{__pyx_filename = __pyx_f[1]; __pyx_lineno = 844; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
}
|
|
__pyx_L11:;
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":845
|
|
* else:
|
|
* raise ValueError(u"unknown dtype code in numpy.pxd (%d)" % t)
|
|
* f += 1 # <<<<<<<<<<<<<<
|
|
* else:
|
|
* # Cython ignores struct boundary information ("T{...}"),
|
|
*/
|
|
__pyx_v_f = (__pyx_v_f + 1);
|
|
goto __pyx_L9;
|
|
}
|
|
/*else*/ {
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":849
|
|
* # Cython ignores struct boundary information ("T{...}"),
|
|
* # so don't output it
|
|
* f = _util_dtypestring(child, f, end, offset) # <<<<<<<<<<<<<<
|
|
* return f
|
|
*
|
|
*/
|
|
__pyx_t_11 = __pyx_f_5numpy__util_dtypestring(__pyx_v_child, __pyx_v_f, __pyx_v_end, __pyx_v_offset); if (unlikely(__pyx_t_11 == NULL)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 849; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__pyx_v_f = __pyx_t_11;
|
|
}
|
|
__pyx_L9:;
|
|
}
|
|
__Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0;
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":850
|
|
* # so don't output it
|
|
* f = _util_dtypestring(child, f, end, offset)
|
|
* return f # <<<<<<<<<<<<<<
|
|
*
|
|
*
|
|
*/
|
|
__pyx_r = __pyx_v_f;
|
|
goto __pyx_L0;
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":783
|
|
* return PyArray_MultiIterNew(5, <void*>a, <void*>b, <void*>c, <void*> d, <void*> e)
|
|
*
|
|
* cdef inline char* _util_dtypestring(dtype descr, char* f, char* end, int* offset) except NULL: # <<<<<<<<<<<<<<
|
|
* # Recursive utility function used in __getbuffer__ to get format
|
|
* # string. The new location in the format string is returned.
|
|
*/
|
|
|
|
/* function exit code */
|
|
__pyx_L1_error:;
|
|
__Pyx_XDECREF(__pyx_t_1);
|
|
__Pyx_XDECREF(__pyx_t_3);
|
|
__Pyx_XDECREF(__pyx_t_4);
|
|
__Pyx_AddTraceback("numpy._util_dtypestring", __pyx_clineno, __pyx_lineno, __pyx_filename);
|
|
__pyx_r = NULL;
|
|
__pyx_L0:;
|
|
__Pyx_XDECREF((PyObject *)__pyx_v_child);
|
|
__Pyx_XDECREF(__pyx_v_fields);
|
|
__Pyx_XDECREF(__pyx_v_childname);
|
|
__Pyx_XDECREF(__pyx_v_new_offset);
|
|
__Pyx_XDECREF(__pyx_v_t);
|
|
__Pyx_RefNannyFinishContext();
|
|
return __pyx_r;
|
|
}
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":966
|
|
*
|
|
*
|
|
* cdef inline void set_array_base(ndarray arr, object base): # <<<<<<<<<<<<<<
|
|
* cdef PyObject* baseptr
|
|
* if base is None:
|
|
*/
|
|
|
|
static CYTHON_INLINE void __pyx_f_5numpy_set_array_base(PyArrayObject *__pyx_v_arr, PyObject *__pyx_v_base) {
|
|
PyObject *__pyx_v_baseptr;
|
|
__Pyx_RefNannyDeclarations
|
|
int __pyx_t_1;
|
|
int __pyx_t_2;
|
|
__Pyx_RefNannySetupContext("set_array_base", 0);
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":968
|
|
* cdef inline void set_array_base(ndarray arr, object base):
|
|
* cdef PyObject* baseptr
|
|
* if base is None: # <<<<<<<<<<<<<<
|
|
* baseptr = NULL
|
|
* else:
|
|
*/
|
|
__pyx_t_1 = (__pyx_v_base == Py_None);
|
|
__pyx_t_2 = (__pyx_t_1 != 0);
|
|
if (__pyx_t_2) {
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":969
|
|
* cdef PyObject* baseptr
|
|
* if base is None:
|
|
* baseptr = NULL # <<<<<<<<<<<<<<
|
|
* else:
|
|
* Py_INCREF(base) # important to do this before decref below!
|
|
*/
|
|
__pyx_v_baseptr = NULL;
|
|
goto __pyx_L3;
|
|
}
|
|
/*else*/ {
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":971
|
|
* baseptr = NULL
|
|
* else:
|
|
* Py_INCREF(base) # important to do this before decref below! # <<<<<<<<<<<<<<
|
|
* baseptr = <PyObject*>base
|
|
* Py_XDECREF(arr.base)
|
|
*/
|
|
Py_INCREF(__pyx_v_base);
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":972
|
|
* else:
|
|
* Py_INCREF(base) # important to do this before decref below!
|
|
* baseptr = <PyObject*>base # <<<<<<<<<<<<<<
|
|
* Py_XDECREF(arr.base)
|
|
* arr.base = baseptr
|
|
*/
|
|
__pyx_v_baseptr = ((PyObject *)__pyx_v_base);
|
|
}
|
|
__pyx_L3:;
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":973
|
|
* Py_INCREF(base) # important to do this before decref below!
|
|
* baseptr = <PyObject*>base
|
|
* Py_XDECREF(arr.base) # <<<<<<<<<<<<<<
|
|
* arr.base = baseptr
|
|
*
|
|
*/
|
|
Py_XDECREF(__pyx_v_arr->base);
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":974
|
|
* baseptr = <PyObject*>base
|
|
* Py_XDECREF(arr.base)
|
|
* arr.base = baseptr # <<<<<<<<<<<<<<
|
|
*
|
|
* cdef inline object get_array_base(ndarray arr):
|
|
*/
|
|
__pyx_v_arr->base = __pyx_v_baseptr;
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":966
|
|
*
|
|
*
|
|
* cdef inline void set_array_base(ndarray arr, object base): # <<<<<<<<<<<<<<
|
|
* cdef PyObject* baseptr
|
|
* if base is None:
|
|
*/
|
|
|
|
/* function exit code */
|
|
__Pyx_RefNannyFinishContext();
|
|
}
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":976
|
|
* arr.base = baseptr
|
|
*
|
|
* cdef inline object get_array_base(ndarray arr): # <<<<<<<<<<<<<<
|
|
* if arr.base is NULL:
|
|
* return None
|
|
*/
|
|
|
|
static CYTHON_INLINE PyObject *__pyx_f_5numpy_get_array_base(PyArrayObject *__pyx_v_arr) {
|
|
PyObject *__pyx_r = NULL;
|
|
__Pyx_RefNannyDeclarations
|
|
int __pyx_t_1;
|
|
__Pyx_RefNannySetupContext("get_array_base", 0);
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":977
|
|
*
|
|
* cdef inline object get_array_base(ndarray arr):
|
|
* if arr.base is NULL: # <<<<<<<<<<<<<<
|
|
* return None
|
|
* else:
|
|
*/
|
|
__pyx_t_1 = ((__pyx_v_arr->base == NULL) != 0);
|
|
if (__pyx_t_1) {
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":978
|
|
* cdef inline object get_array_base(ndarray arr):
|
|
* if arr.base is NULL:
|
|
* return None # <<<<<<<<<<<<<<
|
|
* else:
|
|
* return <object>arr.base
|
|
*/
|
|
__Pyx_XDECREF(__pyx_r);
|
|
__Pyx_INCREF(Py_None);
|
|
__pyx_r = Py_None;
|
|
goto __pyx_L0;
|
|
}
|
|
/*else*/ {
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":980
|
|
* return None
|
|
* else:
|
|
* return <object>arr.base # <<<<<<<<<<<<<<
|
|
*/
|
|
__Pyx_XDECREF(__pyx_r);
|
|
__Pyx_INCREF(((PyObject *)__pyx_v_arr->base));
|
|
__pyx_r = ((PyObject *)__pyx_v_arr->base);
|
|
goto __pyx_L0;
|
|
}
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":976
|
|
* arr.base = baseptr
|
|
*
|
|
* cdef inline object get_array_base(ndarray arr): # <<<<<<<<<<<<<<
|
|
* if arr.base is NULL:
|
|
* return None
|
|
*/
|
|
|
|
/* function exit code */
|
|
__pyx_L0:;
|
|
__Pyx_XGIVEREF(__pyx_r);
|
|
__Pyx_RefNannyFinishContext();
|
|
return __pyx_r;
|
|
}
|
|
|
|
static PyMethodDef __pyx_methods[] = {
|
|
{0, 0, 0, 0}
|
|
};
|
|
|
|
#if PY_MAJOR_VERSION >= 3
|
|
static struct PyModuleDef __pyx_moduledef = {
|
|
#if PY_VERSION_HEX < 0x03020000
|
|
{ PyObject_HEAD_INIT(NULL) NULL, 0, NULL },
|
|
#else
|
|
PyModuleDef_HEAD_INIT,
|
|
#endif
|
|
__Pyx_NAMESTR("libsvm"),
|
|
__Pyx_DOCSTR(__pyx_k_Binding_for_libsvm_skl_These_ar), /* m_doc */
|
|
-1, /* m_size */
|
|
__pyx_methods /* m_methods */,
|
|
NULL, /* m_reload */
|
|
NULL, /* m_traverse */
|
|
NULL, /* m_clear */
|
|
NULL /* m_free */
|
|
};
|
|
#endif
|
|
|
|
static __Pyx_StringTabEntry __pyx_string_tab[] = {
|
|
{&__pyx_n_s_C, __pyx_k_C, sizeof(__pyx_k_C), 0, 0, 1, 1},
|
|
{&__pyx_kp_u_Format_string_allocated_too_shor, __pyx_k_Format_string_allocated_too_shor, sizeof(__pyx_k_Format_string_allocated_too_shor), 0, 1, 0, 0},
|
|
{&__pyx_kp_u_Format_string_allocated_too_shor_2, __pyx_k_Format_string_allocated_too_shor_2, sizeof(__pyx_k_Format_string_allocated_too_shor_2), 0, 1, 0, 0},
|
|
{&__pyx_n_s_LIBSVM_KERNEL_TYPES, __pyx_k_LIBSVM_KERNEL_TYPES, sizeof(__pyx_k_LIBSVM_KERNEL_TYPES), 0, 0, 1, 1},
|
|
{&__pyx_n_s_MemoryError, __pyx_k_MemoryError, sizeof(__pyx_k_MemoryError), 0, 0, 1, 1},
|
|
{&__pyx_kp_u_Non_native_byte_order_not_suppor, __pyx_k_Non_native_byte_order_not_suppor, sizeof(__pyx_k_Non_native_byte_order_not_suppor), 0, 1, 0, 0},
|
|
{&__pyx_kp_s_Number_of_samples_is_less_than_n, __pyx_k_Number_of_samples_is_less_than_n, sizeof(__pyx_k_Number_of_samples_is_less_than_n), 0, 0, 1, 0},
|
|
{&__pyx_n_s_RuntimeError, __pyx_k_RuntimeError, sizeof(__pyx_k_RuntimeError), 0, 0, 1, 1},
|
|
{&__pyx_n_s_SV, __pyx_k_SV, sizeof(__pyx_k_SV), 0, 0, 1, 1},
|
|
{&__pyx_n_s_SV_len, __pyx_k_SV_len, sizeof(__pyx_k_SV_len), 0, 0, 1, 1},
|
|
{&__pyx_kp_s_Seems_we_ve_run_out_of_memory, __pyx_k_Seems_we_ve_run_out_of_memory, sizeof(__pyx_k_Seems_we_ve_run_out_of_memory), 0, 0, 1, 0},
|
|
{&__pyx_n_s_ValueError, __pyx_k_ValueError, sizeof(__pyx_k_ValueError), 0, 0, 1, 1},
|
|
{&__pyx_kp_s_We_ve_run_out_of_memory, __pyx_k_We_ve_run_out_of_memory, sizeof(__pyx_k_We_ve_run_out_of_memory), 0, 0, 1, 0},
|
|
{&__pyx_n_s_X, __pyx_k_X, sizeof(__pyx_k_X), 0, 0, 1, 1},
|
|
{&__pyx_n_s_Y, __pyx_k_Y, sizeof(__pyx_k_Y), 0, 0, 1, 1},
|
|
{&__pyx_n_s_arange, __pyx_k_arange, sizeof(__pyx_k_arange), 0, 0, 1, 1},
|
|
{&__pyx_n_s_cache_size, __pyx_k_cache_size, sizeof(__pyx_k_cache_size), 0, 0, 1, 1},
|
|
{&__pyx_n_s_class_weight, __pyx_k_class_weight, sizeof(__pyx_k_class_weight), 0, 0, 1, 1},
|
|
{&__pyx_n_s_class_weight_label, __pyx_k_class_weight_label, sizeof(__pyx_k_class_weight_label), 0, 0, 1, 1},
|
|
{&__pyx_n_s_coef0, __pyx_k_coef0, sizeof(__pyx_k_coef0), 0, 0, 1, 1},
|
|
{&__pyx_n_s_cross_validation, __pyx_k_cross_validation, sizeof(__pyx_k_cross_validation), 0, 0, 1, 1},
|
|
{&__pyx_n_s_dec_values, __pyx_k_dec_values, sizeof(__pyx_k_dec_values), 0, 0, 1, 1},
|
|
{&__pyx_n_s_decision_function, __pyx_k_decision_function, sizeof(__pyx_k_decision_function), 0, 0, 1, 1},
|
|
{&__pyx_n_s_degree, __pyx_k_degree, sizeof(__pyx_k_degree), 0, 0, 1, 1},
|
|
{&__pyx_n_s_dtype, __pyx_k_dtype, sizeof(__pyx_k_dtype), 0, 0, 1, 1},
|
|
{&__pyx_n_s_empty, __pyx_k_empty, sizeof(__pyx_k_empty), 0, 0, 1, 1},
|
|
{&__pyx_n_s_epsilon, __pyx_k_epsilon, sizeof(__pyx_k_epsilon), 0, 0, 1, 1},
|
|
{&__pyx_kp_s_epsilon_0, __pyx_k_epsilon_0, sizeof(__pyx_k_epsilon_0), 0, 0, 1, 0},
|
|
{&__pyx_n_s_error_msg, __pyx_k_error_msg, sizeof(__pyx_k_error_msg), 0, 0, 1, 1},
|
|
{&__pyx_n_s_error_repl, __pyx_k_error_repl, sizeof(__pyx_k_error_repl), 0, 0, 1, 1},
|
|
{&__pyx_n_s_fit, __pyx_k_fit, sizeof(__pyx_k_fit), 0, 0, 1, 1},
|
|
{&__pyx_n_s_fit_status, __pyx_k_fit_status, sizeof(__pyx_k_fit_status), 0, 0, 1, 1},
|
|
{&__pyx_n_s_float64, __pyx_k_float64, sizeof(__pyx_k_float64), 0, 0, 1, 1},
|
|
{&__pyx_n_s_gamma, __pyx_k_gamma, sizeof(__pyx_k_gamma), 0, 0, 1, 1},
|
|
{&__pyx_kp_s_home_larsb_src_scikit_learn_skl, __pyx_k_home_larsb_src_scikit_learn_skl, sizeof(__pyx_k_home_larsb_src_scikit_learn_skl), 0, 0, 1, 0},
|
|
{&__pyx_n_s_import, __pyx_k_import, sizeof(__pyx_k_import), 0, 0, 1, 1},
|
|
{&__pyx_n_s_index, __pyx_k_index, sizeof(__pyx_k_index), 0, 0, 1, 1},
|
|
{&__pyx_n_s_int32, __pyx_k_int32, sizeof(__pyx_k_int32), 0, 0, 1, 1},
|
|
{&__pyx_n_s_intercept, __pyx_k_intercept, sizeof(__pyx_k_intercept), 0, 0, 1, 1},
|
|
{&__pyx_n_s_kernel, __pyx_k_kernel, sizeof(__pyx_k_kernel), 0, 0, 1, 1},
|
|
{&__pyx_n_s_kernel_index, __pyx_k_kernel_index, sizeof(__pyx_k_kernel_index), 0, 0, 1, 1},
|
|
{&__pyx_n_s_linear, __pyx_k_linear, sizeof(__pyx_k_linear), 0, 0, 1, 1},
|
|
{&__pyx_n_s_main, __pyx_k_main, sizeof(__pyx_k_main), 0, 0, 1, 1},
|
|
{&__pyx_n_s_max_iter, __pyx_k_max_iter, sizeof(__pyx_k_max_iter), 0, 0, 1, 1},
|
|
{&__pyx_n_s_model, __pyx_k_model, sizeof(__pyx_k_model), 0, 0, 1, 1},
|
|
{&__pyx_n_s_nSV, __pyx_k_nSV, sizeof(__pyx_k_nSV), 0, 0, 1, 1},
|
|
{&__pyx_n_s_n_class, __pyx_k_n_class, sizeof(__pyx_k_n_class), 0, 0, 1, 1},
|
|
{&__pyx_n_s_n_class_SV, __pyx_k_n_class_SV, sizeof(__pyx_k_n_class_SV), 0, 0, 1, 1},
|
|
{&__pyx_n_s_n_fold, __pyx_k_n_fold, sizeof(__pyx_k_n_fold), 0, 0, 1, 1},
|
|
{&__pyx_kp_u_ndarray_is_not_C_contiguous, __pyx_k_ndarray_is_not_C_contiguous, sizeof(__pyx_k_ndarray_is_not_C_contiguous), 0, 1, 0, 0},
|
|
{&__pyx_kp_u_ndarray_is_not_Fortran_contiguou, __pyx_k_ndarray_is_not_Fortran_contiguou, sizeof(__pyx_k_ndarray_is_not_Fortran_contiguou), 0, 1, 0, 0},
|
|
{&__pyx_n_s_np, __pyx_k_np, sizeof(__pyx_k_np), 0, 0, 1, 1},
|
|
{&__pyx_n_s_nr, __pyx_k_nr, sizeof(__pyx_k_nr), 0, 0, 1, 1},
|
|
{&__pyx_n_s_nu, __pyx_k_nu, sizeof(__pyx_k_nu), 0, 0, 1, 1},
|
|
{&__pyx_n_s_numpy, __pyx_k_numpy, sizeof(__pyx_k_numpy), 0, 0, 1, 1},
|
|
{&__pyx_n_s_ones, __pyx_k_ones, sizeof(__pyx_k_ones), 0, 0, 1, 1},
|
|
{&__pyx_kp_s_p_0, __pyx_k_p_0, sizeof(__pyx_k_p_0), 0, 0, 1, 0},
|
|
{&__pyx_n_s_param, __pyx_k_param, sizeof(__pyx_k_param), 0, 0, 1, 1},
|
|
{&__pyx_n_s_poly, __pyx_k_poly, sizeof(__pyx_k_poly), 0, 0, 1, 1},
|
|
{&__pyx_n_s_precomputed, __pyx_k_precomputed, sizeof(__pyx_k_precomputed), 0, 0, 1, 1},
|
|
{&__pyx_n_s_predict, __pyx_k_predict, sizeof(__pyx_k_predict), 0, 0, 1, 1},
|
|
{&__pyx_n_s_predict_proba, __pyx_k_predict_proba, sizeof(__pyx_k_predict_proba), 0, 0, 1, 1},
|
|
{&__pyx_n_s_probA, __pyx_k_probA, sizeof(__pyx_k_probA), 0, 0, 1, 1},
|
|
{&__pyx_n_s_probB, __pyx_k_probB, sizeof(__pyx_k_probB), 0, 0, 1, 1},
|
|
{&__pyx_n_s_probability, __pyx_k_probability, sizeof(__pyx_k_probability), 0, 0, 1, 1},
|
|
{&__pyx_n_s_problem, __pyx_k_problem, sizeof(__pyx_k_problem), 0, 0, 1, 1},
|
|
{&__pyx_n_s_pyx_getbuffer, __pyx_k_pyx_getbuffer, sizeof(__pyx_k_pyx_getbuffer), 0, 0, 1, 1},
|
|
{&__pyx_n_s_pyx_releasebuffer, __pyx_k_pyx_releasebuffer, sizeof(__pyx_k_pyx_releasebuffer), 0, 0, 1, 1},
|
|
{&__pyx_n_s_random_seed, __pyx_k_random_seed, sizeof(__pyx_k_random_seed), 0, 0, 1, 1},
|
|
{&__pyx_n_s_range, __pyx_k_range, sizeof(__pyx_k_range), 0, 0, 1, 1},
|
|
{&__pyx_n_s_rbf, __pyx_k_rbf, sizeof(__pyx_k_rbf), 0, 0, 1, 1},
|
|
{&__pyx_n_s_rv, __pyx_k_rv, sizeof(__pyx_k_rv), 0, 0, 1, 1},
|
|
{&__pyx_n_s_sample_weight, __pyx_k_sample_weight, sizeof(__pyx_k_sample_weight), 0, 0, 1, 1},
|
|
{&__pyx_kp_s_sample_weight_and_X_have_incompa, __pyx_k_sample_weight_and_X_have_incompa, sizeof(__pyx_k_sample_weight_and_X_have_incompa), 0, 0, 1, 0},
|
|
{&__pyx_kp_s_sample_weight_has_s_samples_whil, __pyx_k_sample_weight_has_s_samples_whil, sizeof(__pyx_k_sample_weight_has_s_samples_whil), 0, 0, 1, 0},
|
|
{&__pyx_n_s_set_verbosity_wrap, __pyx_k_set_verbosity_wrap, sizeof(__pyx_k_set_verbosity_wrap), 0, 0, 1, 1},
|
|
{&__pyx_n_s_shrinking, __pyx_k_shrinking, sizeof(__pyx_k_shrinking), 0, 0, 1, 1},
|
|
{&__pyx_n_s_sigmoid, __pyx_k_sigmoid, sizeof(__pyx_k_sigmoid), 0, 0, 1, 1},
|
|
{&__pyx_n_s_sklearn_svm_libsvm, __pyx_k_sklearn_svm_libsvm, sizeof(__pyx_k_sklearn_svm_libsvm), 0, 0, 1, 1},
|
|
{&__pyx_n_s_support, __pyx_k_support, sizeof(__pyx_k_support), 0, 0, 1, 1},
|
|
{&__pyx_n_s_support_vectors, __pyx_k_support_vectors, sizeof(__pyx_k_support_vectors), 0, 0, 1, 1},
|
|
{&__pyx_n_s_sv_coef, __pyx_k_sv_coef, sizeof(__pyx_k_sv_coef), 0, 0, 1, 1},
|
|
{&__pyx_n_s_svm_type, __pyx_k_svm_type, sizeof(__pyx_k_svm_type), 0, 0, 1, 1},
|
|
{&__pyx_n_s_target, __pyx_k_target, sizeof(__pyx_k_target), 0, 0, 1, 1},
|
|
{&__pyx_n_s_test, __pyx_k_test, sizeof(__pyx_k_test), 0, 0, 1, 1},
|
|
{&__pyx_n_s_tol, __pyx_k_tol, sizeof(__pyx_k_tol), 0, 0, 1, 1},
|
|
{&__pyx_kp_u_unknown_dtype_code_in_numpy_pxd, __pyx_k_unknown_dtype_code_in_numpy_pxd, sizeof(__pyx_k_unknown_dtype_code_in_numpy_pxd), 0, 1, 0, 0},
|
|
{&__pyx_n_s_verbosity, __pyx_k_verbosity, sizeof(__pyx_k_verbosity), 0, 0, 1, 1},
|
|
{&__pyx_n_s_warnings, __pyx_k_warnings, sizeof(__pyx_k_warnings), 0, 0, 1, 1},
|
|
{0, 0, 0, 0, 0, 0, 0}
|
|
};
|
|
static int __Pyx_InitCachedBuiltins(void) {
|
|
__pyx_builtin_MemoryError = __Pyx_GetBuiltinName(__pyx_n_s_MemoryError); if (!__pyx_builtin_MemoryError) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 175; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__pyx_builtin_ValueError = __Pyx_GetBuiltinName(__pyx_n_s_ValueError); if (!__pyx_builtin_ValueError) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 187; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__pyx_builtin_range = __Pyx_GetBuiltinName(__pyx_n_s_range); if (!__pyx_builtin_range) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 228; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__pyx_builtin_RuntimeError = __Pyx_GetBuiltinName(__pyx_n_s_RuntimeError); if (!__pyx_builtin_RuntimeError) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 799; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
return 0;
|
|
__pyx_L1_error:;
|
|
return -1;
|
|
}
|
|
|
|
static int __Pyx_InitCachedConstants(void) {
|
|
__Pyx_RefNannyDeclarations
|
|
__Pyx_RefNannySetupContext("__Pyx_InitCachedConstants", 0);
|
|
|
|
/* "sklearn/svm/libsvm.pyx":175
|
|
* &problem, X.data, Y.data, sample_weight.data, X.shape, kernel_index)
|
|
* if problem.x == NULL:
|
|
* raise MemoryError("Seems we've run out of memory") # <<<<<<<<<<<<<<
|
|
* cdef np.ndarray[np.int32_t, ndim=1, mode='c'] \
|
|
* class_weight_label = np.arange(class_weight.shape[0], dtype=np.int32)
|
|
*/
|
|
__pyx_tuple__3 = PyTuple_Pack(1, __pyx_kp_s_Seems_we_ve_run_out_of_memory); if (unlikely(!__pyx_tuple__3)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 175; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_tuple__3);
|
|
__Pyx_GIVEREF(__pyx_tuple__3);
|
|
|
|
/* "sklearn/svm/libsvm.pyx":216
|
|
* if kernel_index == 4:
|
|
* # precomputed kernel
|
|
* support_vectors = np.empty((0, 0), dtype=np.float64) # <<<<<<<<<<<<<<
|
|
* else:
|
|
* support_vectors = np.empty((SV_len, X.shape[1]), dtype=np.float64)
|
|
*/
|
|
__pyx_tuple__4 = PyTuple_Pack(2, __pyx_int_0, __pyx_int_0); if (unlikely(!__pyx_tuple__4)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 216; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_tuple__4);
|
|
__Pyx_GIVEREF(__pyx_tuple__4);
|
|
__pyx_tuple__5 = PyTuple_Pack(1, __pyx_tuple__4); if (unlikely(!__pyx_tuple__5)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 216; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_tuple__5);
|
|
__Pyx_GIVEREF(__pyx_tuple__5);
|
|
|
|
/* "sklearn/svm/libsvm.pyx":234
|
|
* copy_probB(probB.data, model, probB.shape)
|
|
* else:
|
|
* probA = np.empty(1, dtype=np.float64) # <<<<<<<<<<<<<<
|
|
* probB = np.empty(0, dtype=np.float64)
|
|
* copy_probA(probA.data, model, probA.shape)
|
|
*/
|
|
__pyx_tuple__6 = PyTuple_Pack(1, __pyx_int_1); if (unlikely(!__pyx_tuple__6)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 234; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_tuple__6);
|
|
__Pyx_GIVEREF(__pyx_tuple__6);
|
|
|
|
/* "sklearn/svm/libsvm.pyx":235
|
|
* else:
|
|
* probA = np.empty(1, dtype=np.float64)
|
|
* probB = np.empty(0, dtype=np.float64) # <<<<<<<<<<<<<<
|
|
* copy_probA(probA.data, model, probA.shape)
|
|
* else:
|
|
*/
|
|
__pyx_tuple__7 = PyTuple_Pack(1, __pyx_int_0); if (unlikely(!__pyx_tuple__7)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 235; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_tuple__7);
|
|
__Pyx_GIVEREF(__pyx_tuple__7);
|
|
|
|
/* "sklearn/svm/libsvm.pyx":238
|
|
* copy_probA(probA.data, model, probA.shape)
|
|
* else:
|
|
* probA = np.empty(0, dtype=np.float64) # <<<<<<<<<<<<<<
|
|
* probB = np.empty(0, dtype=np.float64)
|
|
*
|
|
*/
|
|
__pyx_tuple__8 = PyTuple_Pack(1, __pyx_int_0); if (unlikely(!__pyx_tuple__8)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 238; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_tuple__8);
|
|
__Pyx_GIVEREF(__pyx_tuple__8);
|
|
|
|
/* "sklearn/svm/libsvm.pyx":239
|
|
* else:
|
|
* probA = np.empty(0, dtype=np.float64)
|
|
* probB = np.empty(0, dtype=np.float64) # <<<<<<<<<<<<<<
|
|
*
|
|
* svm_free_and_destroy_model(&model)
|
|
*/
|
|
__pyx_tuple__9 = PyTuple_Pack(1, __pyx_int_0); if (unlikely(!__pyx_tuple__9)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 239; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_tuple__9);
|
|
__Pyx_GIVEREF(__pyx_tuple__9);
|
|
|
|
/* "sklearn/svm/libsvm.pyx":328
|
|
* rv = copy_predict(X.data, model, X.shape, dec_values.data)
|
|
* if rv < 0:
|
|
* raise MemoryError("We've run out of memory") # <<<<<<<<<<<<<<
|
|
* finally:
|
|
* free_model(model)
|
|
*/
|
|
__pyx_tuple__14 = PyTuple_Pack(1, __pyx_kp_s_We_ve_run_out_of_memory); if (unlikely(!__pyx_tuple__14)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 328; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_tuple__14);
|
|
__Pyx_GIVEREF(__pyx_tuple__14);
|
|
|
|
/* "sklearn/svm/libsvm.pyx":395
|
|
* rv = copy_predict_proba(X.data, model, X.shape, dec_values.data)
|
|
* if rv < 0:
|
|
* raise MemoryError("We've run out of memory") # <<<<<<<<<<<<<<
|
|
* finally:
|
|
* free_model(model)
|
|
*/
|
|
__pyx_tuple__19 = PyTuple_Pack(1, __pyx_kp_s_We_ve_run_out_of_memory); if (unlikely(!__pyx_tuple__19)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 395; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_tuple__19);
|
|
__Pyx_GIVEREF(__pyx_tuple__19);
|
|
|
|
/* "sklearn/svm/libsvm.pyx":454
|
|
* rv = copy_predict_values(X.data, model, X.shape, dec_values.data, n_class)
|
|
* if rv < 0:
|
|
* raise MemoryError("We've run out of memory") # <<<<<<<<<<<<<<
|
|
* finally:
|
|
* free_model(model)
|
|
*/
|
|
__pyx_tuple__24 = PyTuple_Pack(1, __pyx_kp_s_We_ve_run_out_of_memory); if (unlikely(!__pyx_tuple__24)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 454; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_tuple__24);
|
|
__Pyx_GIVEREF(__pyx_tuple__24);
|
|
|
|
/* "sklearn/svm/libsvm.pyx":539
|
|
*
|
|
* if X.shape[0] < n_fold:
|
|
* raise ValueError("Number of samples is less than number of folds") # <<<<<<<<<<<<<<
|
|
*
|
|
* # set problem
|
|
*/
|
|
__pyx_tuple__27 = PyTuple_Pack(1, __pyx_kp_s_Number_of_samples_is_less_than_n); if (unlikely(!__pyx_tuple__27)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 539; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_tuple__27);
|
|
__Pyx_GIVEREF(__pyx_tuple__27);
|
|
|
|
/* "sklearn/svm/libsvm.pyx":546
|
|
* &problem, X.data, Y.data, sample_weight.data, X.shape, kernel_index)
|
|
* if problem.x == NULL:
|
|
* raise MemoryError("Seems we've run out of memory") # <<<<<<<<<<<<<<
|
|
* cdef np.ndarray[np.int32_t, ndim=1, mode='c'] \
|
|
* class_weight_label = np.arange(class_weight.shape[0], dtype=np.int32)
|
|
*/
|
|
__pyx_tuple__28 = PyTuple_Pack(1, __pyx_kp_s_Seems_we_ve_run_out_of_memory); if (unlikely(!__pyx_tuple__28)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 546; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_tuple__28);
|
|
__Pyx_GIVEREF(__pyx_tuple__28);
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":215
|
|
* if ((flags & pybuf.PyBUF_C_CONTIGUOUS == pybuf.PyBUF_C_CONTIGUOUS)
|
|
* and not PyArray_CHKFLAGS(self, NPY_C_CONTIGUOUS)):
|
|
* raise ValueError(u"ndarray is not C contiguous") # <<<<<<<<<<<<<<
|
|
*
|
|
* if ((flags & pybuf.PyBUF_F_CONTIGUOUS == pybuf.PyBUF_F_CONTIGUOUS)
|
|
*/
|
|
__pyx_tuple__29 = PyTuple_Pack(1, __pyx_kp_u_ndarray_is_not_C_contiguous); if (unlikely(!__pyx_tuple__29)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 215; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_tuple__29);
|
|
__Pyx_GIVEREF(__pyx_tuple__29);
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":219
|
|
* if ((flags & pybuf.PyBUF_F_CONTIGUOUS == pybuf.PyBUF_F_CONTIGUOUS)
|
|
* and not PyArray_CHKFLAGS(self, NPY_F_CONTIGUOUS)):
|
|
* raise ValueError(u"ndarray is not Fortran contiguous") # <<<<<<<<<<<<<<
|
|
*
|
|
* info.buf = PyArray_DATA(self)
|
|
*/
|
|
__pyx_tuple__30 = PyTuple_Pack(1, __pyx_kp_u_ndarray_is_not_Fortran_contiguou); if (unlikely(!__pyx_tuple__30)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 219; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_tuple__30);
|
|
__Pyx_GIVEREF(__pyx_tuple__30);
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":257
|
|
* if ((descr.byteorder == c'>' and little_endian) or
|
|
* (descr.byteorder == c'<' and not little_endian)):
|
|
* raise ValueError(u"Non-native byte order not supported") # <<<<<<<<<<<<<<
|
|
* if t == NPY_BYTE: f = "b"
|
|
* elif t == NPY_UBYTE: f = "B"
|
|
*/
|
|
__pyx_tuple__31 = PyTuple_Pack(1, __pyx_kp_u_Non_native_byte_order_not_suppor); if (unlikely(!__pyx_tuple__31)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 257; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_tuple__31);
|
|
__Pyx_GIVEREF(__pyx_tuple__31);
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":799
|
|
*
|
|
* if (end - f) - <int>(new_offset - offset[0]) < 15:
|
|
* raise RuntimeError(u"Format string allocated too short, see comment in numpy.pxd") # <<<<<<<<<<<<<<
|
|
*
|
|
* if ((child.byteorder == c'>' and little_endian) or
|
|
*/
|
|
__pyx_tuple__32 = PyTuple_Pack(1, __pyx_kp_u_Format_string_allocated_too_shor); if (unlikely(!__pyx_tuple__32)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 799; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_tuple__32);
|
|
__Pyx_GIVEREF(__pyx_tuple__32);
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":803
|
|
* if ((child.byteorder == c'>' and little_endian) or
|
|
* (child.byteorder == c'<' and not little_endian)):
|
|
* raise ValueError(u"Non-native byte order not supported") # <<<<<<<<<<<<<<
|
|
* # One could encode it in the format string and have Cython
|
|
* # complain instead, BUT: < and > in format strings also imply
|
|
*/
|
|
__pyx_tuple__33 = PyTuple_Pack(1, __pyx_kp_u_Non_native_byte_order_not_suppor); if (unlikely(!__pyx_tuple__33)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 803; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_tuple__33);
|
|
__Pyx_GIVEREF(__pyx_tuple__33);
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":823
|
|
* t = child.type_num
|
|
* if end - f < 5:
|
|
* raise RuntimeError(u"Format string allocated too short.") # <<<<<<<<<<<<<<
|
|
*
|
|
* # Until ticket #99 is fixed, use integers to avoid warnings
|
|
*/
|
|
__pyx_tuple__34 = PyTuple_Pack(1, __pyx_kp_u_Format_string_allocated_too_shor_2); if (unlikely(!__pyx_tuple__34)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 823; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_tuple__34);
|
|
__Pyx_GIVEREF(__pyx_tuple__34);
|
|
|
|
/* "sklearn/svm/libsvm.pyx":61
|
|
* double C=1., double nu=0.5, double epsilon=0.1,
|
|
* np.ndarray[np.float64_t, ndim=1, mode='c']
|
|
* class_weight=np.empty(0), # <<<<<<<<<<<<<<
|
|
* np.ndarray[np.float64_t, ndim=1, mode='c']
|
|
* sample_weight=np.empty(0),
|
|
*/
|
|
__pyx_tuple__35 = PyTuple_Pack(1, __pyx_int_0); if (unlikely(!__pyx_tuple__35)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 61; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_tuple__35);
|
|
__Pyx_GIVEREF(__pyx_tuple__35);
|
|
|
|
/* "sklearn/svm/libsvm.pyx":63
|
|
* class_weight=np.empty(0),
|
|
* np.ndarray[np.float64_t, ndim=1, mode='c']
|
|
* sample_weight=np.empty(0), # <<<<<<<<<<<<<<
|
|
* int shrinking=1, int probability=0,
|
|
* double cache_size=100.,
|
|
*/
|
|
__pyx_tuple__36 = PyTuple_Pack(1, __pyx_int_0); if (unlikely(!__pyx_tuple__36)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 63; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_tuple__36);
|
|
__Pyx_GIVEREF(__pyx_tuple__36);
|
|
|
|
/* "sklearn/svm/libsvm.pyx":54
|
|
* # Wrapper functions
|
|
*
|
|
* def fit( # <<<<<<<<<<<<<<
|
|
* np.ndarray[np.float64_t, ndim=2, mode='c'] X,
|
|
* np.ndarray[np.float64_t, ndim=1, mode='c'] Y,
|
|
*/
|
|
__pyx_tuple__37 = PyTuple_Pack(36, __pyx_n_s_X, __pyx_n_s_Y, __pyx_n_s_svm_type, __pyx_n_s_kernel, __pyx_n_s_degree, __pyx_n_s_gamma, __pyx_n_s_coef0, __pyx_n_s_tol, __pyx_n_s_C, __pyx_n_s_nu, __pyx_n_s_epsilon, __pyx_n_s_class_weight, __pyx_n_s_sample_weight, __pyx_n_s_shrinking, __pyx_n_s_probability, __pyx_n_s_cache_size, __pyx_n_s_max_iter, __pyx_n_s_random_seed, __pyx_n_s_param, __pyx_n_s_problem, __pyx_n_s_model, __pyx_n_s_error_msg, __pyx_n_s_SV_len, __pyx_n_s_nr, __pyx_n_s_kernel_index, __pyx_n_s_class_weight_label, __pyx_n_s_error_repl, __pyx_n_s_fit_status, __pyx_n_s_n_class, __pyx_n_s_sv_coef, __pyx_n_s_intercept, __pyx_n_s_support, __pyx_n_s_support_vectors, __pyx_n_s_n_class_SV, __pyx_n_s_probA, __pyx_n_s_probB); if (unlikely(!__pyx_tuple__37)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 54; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_tuple__37);
|
|
__Pyx_GIVEREF(__pyx_tuple__37);
|
|
__pyx_codeobj__38 = (PyObject*)__Pyx_PyCode_New(18, 0, 36, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__37, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_home_larsb_src_scikit_learn_skl, __pyx_n_s_fit, 54, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__38)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 54; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
|
|
/* "sklearn/svm/libsvm.pyx":276
|
|
* np.ndarray[np.float64_t, ndim=2, mode='c'] sv_coef,
|
|
* np.ndarray[np.float64_t, ndim=1, mode='c'] intercept,
|
|
* np.ndarray[np.float64_t, ndim=1, mode='c'] probA=np.empty(0), # <<<<<<<<<<<<<<
|
|
* np.ndarray[np.float64_t, ndim=1, mode='c'] probB=np.empty(0),
|
|
* int svm_type=0, kernel='rbf', int degree=3,
|
|
*/
|
|
__pyx_tuple__39 = PyTuple_Pack(1, __pyx_int_0); if (unlikely(!__pyx_tuple__39)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 276; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_tuple__39);
|
|
__Pyx_GIVEREF(__pyx_tuple__39);
|
|
|
|
/* "sklearn/svm/libsvm.pyx":277
|
|
* np.ndarray[np.float64_t, ndim=1, mode='c'] intercept,
|
|
* np.ndarray[np.float64_t, ndim=1, mode='c'] probA=np.empty(0),
|
|
* np.ndarray[np.float64_t, ndim=1, mode='c'] probB=np.empty(0), # <<<<<<<<<<<<<<
|
|
* int svm_type=0, kernel='rbf', int degree=3,
|
|
* double gamma=0.1, double coef0=0.,
|
|
*/
|
|
__pyx_tuple__40 = PyTuple_Pack(1, __pyx_int_0); if (unlikely(!__pyx_tuple__40)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 277; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_tuple__40);
|
|
__Pyx_GIVEREF(__pyx_tuple__40);
|
|
|
|
/* "sklearn/svm/libsvm.pyx":281
|
|
* double gamma=0.1, double coef0=0.,
|
|
* np.ndarray[np.float64_t, ndim=1, mode='c']
|
|
* class_weight=np.empty(0), # <<<<<<<<<<<<<<
|
|
* np.ndarray[np.float64_t, ndim=1, mode='c']
|
|
* sample_weight=np.empty(0),
|
|
*/
|
|
__pyx_tuple__41 = PyTuple_Pack(1, __pyx_int_0); if (unlikely(!__pyx_tuple__41)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 281; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_tuple__41);
|
|
__Pyx_GIVEREF(__pyx_tuple__41);
|
|
|
|
/* "sklearn/svm/libsvm.pyx":283
|
|
* class_weight=np.empty(0),
|
|
* np.ndarray[np.float64_t, ndim=1, mode='c']
|
|
* sample_weight=np.empty(0), # <<<<<<<<<<<<<<
|
|
* double cache_size=100.):
|
|
* """
|
|
*/
|
|
__pyx_tuple__42 = PyTuple_Pack(1, __pyx_int_0); if (unlikely(!__pyx_tuple__42)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 283; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_tuple__42);
|
|
__Pyx_GIVEREF(__pyx_tuple__42);
|
|
|
|
/* "sklearn/svm/libsvm.pyx":270
|
|
*
|
|
*
|
|
* def predict(np.ndarray[np.float64_t, ndim=2, mode='c'] X, # <<<<<<<<<<<<<<
|
|
* np.ndarray[np.int32_t, ndim=1, mode='c'] support,
|
|
* np.ndarray[np.float64_t, ndim=2, mode='c'] SV,
|
|
*/
|
|
__pyx_tuple__43 = PyTuple_Pack(21, __pyx_n_s_X, __pyx_n_s_support, __pyx_n_s_SV, __pyx_n_s_nSV, __pyx_n_s_sv_coef, __pyx_n_s_intercept, __pyx_n_s_probA, __pyx_n_s_probB, __pyx_n_s_svm_type, __pyx_n_s_kernel, __pyx_n_s_degree, __pyx_n_s_gamma, __pyx_n_s_coef0, __pyx_n_s_class_weight, __pyx_n_s_sample_weight, __pyx_n_s_cache_size, __pyx_n_s_dec_values, __pyx_n_s_param, __pyx_n_s_model, __pyx_n_s_rv, __pyx_n_s_class_weight_label); if (unlikely(!__pyx_tuple__43)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 270; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_tuple__43);
|
|
__Pyx_GIVEREF(__pyx_tuple__43);
|
|
__pyx_codeobj__44 = (PyObject*)__Pyx_PyCode_New(16, 0, 21, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__43, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_home_larsb_src_scikit_learn_skl, __pyx_n_s_predict, 270, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__44)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 270; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
|
|
/* "sklearn/svm/libsvm.pyx":342
|
|
* np.ndarray[np.float64_t, ndim=2, mode='c'] sv_coef,
|
|
* np.ndarray[np.float64_t, ndim=1, mode='c'] intercept,
|
|
* np.ndarray[np.float64_t, ndim=1, mode='c'] probA=np.empty(0), # <<<<<<<<<<<<<<
|
|
* np.ndarray[np.float64_t, ndim=1, mode='c'] probB=np.empty(0),
|
|
* int svm_type=0, str kernel='rbf', int degree=3,
|
|
*/
|
|
__pyx_tuple__45 = PyTuple_Pack(1, __pyx_int_0); if (unlikely(!__pyx_tuple__45)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 342; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_tuple__45);
|
|
__Pyx_GIVEREF(__pyx_tuple__45);
|
|
|
|
/* "sklearn/svm/libsvm.pyx":343
|
|
* np.ndarray[np.float64_t, ndim=1, mode='c'] intercept,
|
|
* np.ndarray[np.float64_t, ndim=1, mode='c'] probA=np.empty(0),
|
|
* np.ndarray[np.float64_t, ndim=1, mode='c'] probB=np.empty(0), # <<<<<<<<<<<<<<
|
|
* int svm_type=0, str kernel='rbf', int degree=3,
|
|
* double gamma=0.1, double coef0=0.,
|
|
*/
|
|
__pyx_tuple__46 = PyTuple_Pack(1, __pyx_int_0); if (unlikely(!__pyx_tuple__46)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 343; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_tuple__46);
|
|
__Pyx_GIVEREF(__pyx_tuple__46);
|
|
|
|
/* "sklearn/svm/libsvm.pyx":347
|
|
* double gamma=0.1, double coef0=0.,
|
|
* np.ndarray[np.float64_t, ndim=1, mode='c']
|
|
* class_weight=np.empty(0), # <<<<<<<<<<<<<<
|
|
* np.ndarray[np.float64_t, ndim=1, mode='c']
|
|
* sample_weight=np.empty(0),
|
|
*/
|
|
__pyx_tuple__47 = PyTuple_Pack(1, __pyx_int_0); if (unlikely(!__pyx_tuple__47)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 347; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_tuple__47);
|
|
__Pyx_GIVEREF(__pyx_tuple__47);
|
|
|
|
/* "sklearn/svm/libsvm.pyx":349
|
|
* class_weight=np.empty(0),
|
|
* np.ndarray[np.float64_t, ndim=1, mode='c']
|
|
* sample_weight=np.empty(0), # <<<<<<<<<<<<<<
|
|
* double cache_size=100.):
|
|
* """
|
|
*/
|
|
__pyx_tuple__48 = PyTuple_Pack(1, __pyx_int_0); if (unlikely(!__pyx_tuple__48)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 349; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_tuple__48);
|
|
__Pyx_GIVEREF(__pyx_tuple__48);
|
|
|
|
/* "sklearn/svm/libsvm.pyx":335
|
|
*
|
|
*
|
|
* def predict_proba( # <<<<<<<<<<<<<<
|
|
* np.ndarray[np.float64_t, ndim=2, mode='c'] X,
|
|
* np.ndarray[np.int32_t, ndim=1, mode='c'] support,
|
|
*/
|
|
__pyx_tuple__49 = PyTuple_Pack(22, __pyx_n_s_X, __pyx_n_s_support, __pyx_n_s_SV, __pyx_n_s_nSV, __pyx_n_s_sv_coef, __pyx_n_s_intercept, __pyx_n_s_probA, __pyx_n_s_probB, __pyx_n_s_svm_type, __pyx_n_s_kernel, __pyx_n_s_degree, __pyx_n_s_gamma, __pyx_n_s_coef0, __pyx_n_s_class_weight, __pyx_n_s_sample_weight, __pyx_n_s_cache_size, __pyx_n_s_dec_values, __pyx_n_s_param, __pyx_n_s_model, __pyx_n_s_class_weight_label, __pyx_n_s_rv, __pyx_n_s_n_class); if (unlikely(!__pyx_tuple__49)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 335; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_tuple__49);
|
|
__Pyx_GIVEREF(__pyx_tuple__49);
|
|
__pyx_codeobj__50 = (PyObject*)__Pyx_PyCode_New(16, 0, 22, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__49, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_home_larsb_src_scikit_learn_skl, __pyx_n_s_predict_proba, 335, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__50)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 335; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
|
|
/* "sklearn/svm/libsvm.pyx":409
|
|
* np.ndarray[np.float64_t, ndim=2, mode='c'] sv_coef,
|
|
* np.ndarray[np.float64_t, ndim=1, mode='c'] intercept,
|
|
* np.ndarray[np.float64_t, ndim=1, mode='c'] probA=np.empty(0), # <<<<<<<<<<<<<<
|
|
* np.ndarray[np.float64_t, ndim=1, mode='c'] probB=np.empty(0),
|
|
* int svm_type=0, kernel='rbf', int degree=3,
|
|
*/
|
|
__pyx_tuple__51 = PyTuple_Pack(1, __pyx_int_0); if (unlikely(!__pyx_tuple__51)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 409; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_tuple__51);
|
|
__Pyx_GIVEREF(__pyx_tuple__51);
|
|
|
|
/* "sklearn/svm/libsvm.pyx":410
|
|
* np.ndarray[np.float64_t, ndim=1, mode='c'] intercept,
|
|
* np.ndarray[np.float64_t, ndim=1, mode='c'] probA=np.empty(0),
|
|
* np.ndarray[np.float64_t, ndim=1, mode='c'] probB=np.empty(0), # <<<<<<<<<<<<<<
|
|
* int svm_type=0, kernel='rbf', int degree=3,
|
|
* double gamma=0.1, double coef0=0.,
|
|
*/
|
|
__pyx_tuple__52 = PyTuple_Pack(1, __pyx_int_0); if (unlikely(!__pyx_tuple__52)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 410; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_tuple__52);
|
|
__Pyx_GIVEREF(__pyx_tuple__52);
|
|
|
|
/* "sklearn/svm/libsvm.pyx":414
|
|
* double gamma=0.1, double coef0=0.,
|
|
* np.ndarray[np.float64_t, ndim=1, mode='c']
|
|
* class_weight=np.empty(0), # <<<<<<<<<<<<<<
|
|
* np.ndarray[np.float64_t, ndim=1, mode='c']
|
|
* sample_weight=np.empty(0),
|
|
*/
|
|
__pyx_tuple__53 = PyTuple_Pack(1, __pyx_int_0); if (unlikely(!__pyx_tuple__53)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 414; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_tuple__53);
|
|
__Pyx_GIVEREF(__pyx_tuple__53);
|
|
|
|
/* "sklearn/svm/libsvm.pyx":416
|
|
* class_weight=np.empty(0),
|
|
* np.ndarray[np.float64_t, ndim=1, mode='c']
|
|
* sample_weight=np.empty(0), # <<<<<<<<<<<<<<
|
|
* double cache_size=100.):
|
|
* """
|
|
*/
|
|
__pyx_tuple__54 = PyTuple_Pack(1, __pyx_int_0); if (unlikely(!__pyx_tuple__54)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 416; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_tuple__54);
|
|
__Pyx_GIVEREF(__pyx_tuple__54);
|
|
|
|
/* "sklearn/svm/libsvm.pyx":402
|
|
*
|
|
*
|
|
* def decision_function( # <<<<<<<<<<<<<<
|
|
* np.ndarray[np.float64_t, ndim=2, mode='c'] X,
|
|
* np.ndarray[np.int32_t, ndim=1, mode='c'] support,
|
|
*/
|
|
__pyx_tuple__55 = PyTuple_Pack(22, __pyx_n_s_X, __pyx_n_s_support, __pyx_n_s_SV, __pyx_n_s_nSV, __pyx_n_s_sv_coef, __pyx_n_s_intercept, __pyx_n_s_probA, __pyx_n_s_probB, __pyx_n_s_svm_type, __pyx_n_s_kernel, __pyx_n_s_degree, __pyx_n_s_gamma, __pyx_n_s_coef0, __pyx_n_s_class_weight, __pyx_n_s_sample_weight, __pyx_n_s_cache_size, __pyx_n_s_dec_values, __pyx_n_s_param, __pyx_n_s_model, __pyx_n_s_n_class, __pyx_n_s_class_weight_label, __pyx_n_s_rv); if (unlikely(!__pyx_tuple__55)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 402; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_tuple__55);
|
|
__Pyx_GIVEREF(__pyx_tuple__55);
|
|
__pyx_codeobj__56 = (PyObject*)__Pyx_PyCode_New(16, 0, 22, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__55, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_home_larsb_src_scikit_learn_skl, __pyx_n_s_decision_function, 402, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__56)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 402; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
|
|
/* "sklearn/svm/libsvm.pyx":468
|
|
* double C=1., double nu=0.5, double epsilon=0.1,
|
|
* np.ndarray[np.float64_t, ndim=1, mode='c']
|
|
* class_weight=np.empty(0), # <<<<<<<<<<<<<<
|
|
* np.ndarray[np.float64_t, ndim=1, mode='c']
|
|
* sample_weight=np.empty(0),
|
|
*/
|
|
__pyx_tuple__57 = PyTuple_Pack(1, __pyx_int_0); if (unlikely(!__pyx_tuple__57)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 468; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_tuple__57);
|
|
__Pyx_GIVEREF(__pyx_tuple__57);
|
|
|
|
/* "sklearn/svm/libsvm.pyx":470
|
|
* class_weight=np.empty(0),
|
|
* np.ndarray[np.float64_t, ndim=1, mode='c']
|
|
* sample_weight=np.empty(0), # <<<<<<<<<<<<<<
|
|
* int shrinking=0, int probability=0, double cache_size=100.,
|
|
* int max_iter=-1,
|
|
*/
|
|
__pyx_tuple__58 = PyTuple_Pack(1, __pyx_int_0); if (unlikely(!__pyx_tuple__58)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 470; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_tuple__58);
|
|
__Pyx_GIVEREF(__pyx_tuple__58);
|
|
|
|
/* "sklearn/svm/libsvm.pyx":461
|
|
*
|
|
*
|
|
* def cross_validation( # <<<<<<<<<<<<<<
|
|
* np.ndarray[np.float64_t, ndim=2, mode='c'] X,
|
|
* np.ndarray[np.float64_t, ndim=1, mode='c'] Y,
|
|
*/
|
|
__pyx_tuple__59 = PyTuple_Pack(28, __pyx_n_s_X, __pyx_n_s_Y, __pyx_n_s_n_fold, __pyx_n_s_svm_type, __pyx_n_s_kernel, __pyx_n_s_degree, __pyx_n_s_gamma, __pyx_n_s_coef0, __pyx_n_s_tol, __pyx_n_s_C, __pyx_n_s_nu, __pyx_n_s_epsilon, __pyx_n_s_class_weight, __pyx_n_s_sample_weight, __pyx_n_s_shrinking, __pyx_n_s_probability, __pyx_n_s_cache_size, __pyx_n_s_max_iter, __pyx_n_s_random_seed, __pyx_n_s_param, __pyx_n_s_problem, __pyx_n_s_model, __pyx_n_s_error_msg, __pyx_n_s_SV_len, __pyx_n_s_nr, __pyx_n_s_kernel_index, __pyx_n_s_class_weight_label, __pyx_n_s_target); if (unlikely(!__pyx_tuple__59)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 461; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_tuple__59);
|
|
__Pyx_GIVEREF(__pyx_tuple__59);
|
|
__pyx_codeobj__60 = (PyObject*)__Pyx_PyCode_New(19, 0, 28, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__59, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_home_larsb_src_scikit_learn_skl, __pyx_n_s_cross_validation, 461, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__60)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 461; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
|
|
/* "sklearn/svm/libsvm.pyx":572
|
|
*
|
|
*
|
|
* def set_verbosity_wrap(int verbosity): # <<<<<<<<<<<<<<
|
|
* """
|
|
* Control verbosity of libsvm library
|
|
*/
|
|
__pyx_tuple__61 = PyTuple_Pack(2, __pyx_n_s_verbosity, __pyx_n_s_verbosity); if (unlikely(!__pyx_tuple__61)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 572; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_tuple__61);
|
|
__Pyx_GIVEREF(__pyx_tuple__61);
|
|
__pyx_codeobj__62 = (PyObject*)__Pyx_PyCode_New(1, 0, 2, 0, 0, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__61, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_home_larsb_src_scikit_learn_skl, __pyx_n_s_set_verbosity_wrap, 572, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__62)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 572; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_RefNannyFinishContext();
|
|
return 0;
|
|
__pyx_L1_error:;
|
|
__Pyx_RefNannyFinishContext();
|
|
return -1;
|
|
}
|
|
|
|
static int __Pyx_InitGlobals(void) {
|
|
if (__Pyx_InitStrings(__pyx_string_tab) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;};
|
|
__pyx_int_0 = PyInt_FromLong(0); if (unlikely(!__pyx_int_0)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__pyx_int_1 = PyInt_FromLong(1); if (unlikely(!__pyx_int_1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__pyx_int_2 = PyInt_FromLong(2); if (unlikely(!__pyx_int_2)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__pyx_int_4 = PyInt_FromLong(4); if (unlikely(!__pyx_int_4)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
return 0;
|
|
__pyx_L1_error:;
|
|
return -1;
|
|
}
|
|
|
|
#if PY_MAJOR_VERSION < 3
|
|
PyMODINIT_FUNC initlibsvm(void); /*proto*/
|
|
PyMODINIT_FUNC initlibsvm(void)
|
|
#else
|
|
PyMODINIT_FUNC PyInit_libsvm(void); /*proto*/
|
|
PyMODINIT_FUNC PyInit_libsvm(void)
|
|
#endif
|
|
{
|
|
PyObject *__pyx_t_1 = NULL;
|
|
PyObject *__pyx_t_2 = NULL;
|
|
int __pyx_lineno = 0;
|
|
const char *__pyx_filename = NULL;
|
|
int __pyx_clineno = 0;
|
|
__Pyx_RefNannyDeclarations
|
|
#if CYTHON_REFNANNY
|
|
__Pyx_RefNanny = __Pyx_RefNannyImportAPI("refnanny");
|
|
if (!__Pyx_RefNanny) {
|
|
PyErr_Clear();
|
|
__Pyx_RefNanny = __Pyx_RefNannyImportAPI("Cython.Runtime.refnanny");
|
|
if (!__Pyx_RefNanny)
|
|
Py_FatalError("failed to import 'refnanny' module");
|
|
}
|
|
#endif
|
|
__Pyx_RefNannySetupContext("PyMODINIT_FUNC PyInit_libsvm(void)", 0);
|
|
if ( __Pyx_check_binary_version() < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__pyx_empty_tuple = PyTuple_New(0); if (unlikely(!__pyx_empty_tuple)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__pyx_empty_bytes = PyBytes_FromStringAndSize("", 0); if (unlikely(!__pyx_empty_bytes)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
#ifdef __Pyx_CyFunction_USED
|
|
if (__Pyx_CyFunction_init() < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
#endif
|
|
#ifdef __Pyx_FusedFunction_USED
|
|
if (__pyx_FusedFunction_init() < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
#endif
|
|
#ifdef __Pyx_Generator_USED
|
|
if (__pyx_Generator_init() < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
#endif
|
|
/*--- Library function declarations ---*/
|
|
/*--- Threads initialization code ---*/
|
|
#if defined(__PYX_FORCE_INIT_THREADS) && __PYX_FORCE_INIT_THREADS
|
|
#ifdef WITH_THREAD /* Python build with threading support? */
|
|
PyEval_InitThreads();
|
|
#endif
|
|
#endif
|
|
/*--- Module creation code ---*/
|
|
#if PY_MAJOR_VERSION < 3
|
|
__pyx_m = Py_InitModule4(__Pyx_NAMESTR("libsvm"), __pyx_methods, __Pyx_DOCSTR(__pyx_k_Binding_for_libsvm_skl_These_ar), 0, PYTHON_API_VERSION); Py_XINCREF(__pyx_m);
|
|
#else
|
|
__pyx_m = PyModule_Create(&__pyx_moduledef);
|
|
#endif
|
|
if (unlikely(!__pyx_m)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__pyx_d = PyModule_GetDict(__pyx_m); if (unlikely(!__pyx_d)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
Py_INCREF(__pyx_d);
|
|
__pyx_b = PyImport_AddModule(__Pyx_NAMESTR(__Pyx_BUILTIN_MODULE_NAME)); if (unlikely(!__pyx_b)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
#if CYTHON_COMPILING_IN_PYPY
|
|
Py_INCREF(__pyx_b);
|
|
#endif
|
|
if (__Pyx_SetAttrString(__pyx_m, "__builtins__", __pyx_b) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;};
|
|
/*--- Initialize various global constants etc. ---*/
|
|
if (unlikely(__Pyx_InitGlobals() < 0)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
#if PY_MAJOR_VERSION < 3 && (__PYX_DEFAULT_STRING_ENCODING_IS_ASCII || __PYX_DEFAULT_STRING_ENCODING_IS_DEFAULT)
|
|
if (__Pyx_init_sys_getdefaultencoding_params() < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
#endif
|
|
if (__pyx_module_is_main_sklearn__svm__libsvm) {
|
|
if (__Pyx_SetAttrString(__pyx_m, "__name__", __pyx_n_s_main) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;};
|
|
}
|
|
#if PY_MAJOR_VERSION >= 3
|
|
{
|
|
PyObject *modules = PyImport_GetModuleDict(); if (unlikely(!modules)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
if (!PyDict_GetItemString(modules, "sklearn.svm.libsvm")) {
|
|
if (unlikely(PyDict_SetItemString(modules, "sklearn.svm.libsvm", __pyx_m) < 0)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
}
|
|
}
|
|
#endif
|
|
/*--- Builtin init code ---*/
|
|
if (unlikely(__Pyx_InitCachedBuiltins() < 0)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
/*--- Constants init code ---*/
|
|
if (unlikely(__Pyx_InitCachedConstants() < 0)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
/*--- Global init code ---*/
|
|
/*--- Variable export code ---*/
|
|
/*--- Function export code ---*/
|
|
/*--- Type init code ---*/
|
|
/*--- Type import code ---*/
|
|
__pyx_ptype_7cpython_4type_type = __Pyx_ImportType(__Pyx_BUILTIN_MODULE_NAME, "type",
|
|
#if CYTHON_COMPILING_IN_PYPY
|
|
sizeof(PyTypeObject),
|
|
#else
|
|
sizeof(PyHeapTypeObject),
|
|
#endif
|
|
0); if (unlikely(!__pyx_ptype_7cpython_4type_type)) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 9; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__pyx_ptype_5numpy_dtype = __Pyx_ImportType("numpy", "dtype", sizeof(PyArray_Descr), 0); if (unlikely(!__pyx_ptype_5numpy_dtype)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 155; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__pyx_ptype_5numpy_flatiter = __Pyx_ImportType("numpy", "flatiter", sizeof(PyArrayIterObject), 0); if (unlikely(!__pyx_ptype_5numpy_flatiter)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 165; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__pyx_ptype_5numpy_broadcast = __Pyx_ImportType("numpy", "broadcast", sizeof(PyArrayMultiIterObject), 0); if (unlikely(!__pyx_ptype_5numpy_broadcast)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 169; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__pyx_ptype_5numpy_ndarray = __Pyx_ImportType("numpy", "ndarray", sizeof(PyArrayObject), 0); if (unlikely(!__pyx_ptype_5numpy_ndarray)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 178; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__pyx_ptype_5numpy_ufunc = __Pyx_ImportType("numpy", "ufunc", sizeof(PyUFuncObject), 0); if (unlikely(!__pyx_ptype_5numpy_ufunc)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 861; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
/*--- Variable import code ---*/
|
|
/*--- Function import code ---*/
|
|
/*--- Execution code ---*/
|
|
|
|
/* "sklearn/svm/libsvm.pyx":33
|
|
* """
|
|
*
|
|
* import warnings # <<<<<<<<<<<<<<
|
|
* import numpy as np
|
|
* cimport numpy as np
|
|
*/
|
|
__pyx_t_1 = __Pyx_Import(__pyx_n_s_warnings, 0, -1); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 33; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_1);
|
|
if (PyDict_SetItem(__pyx_d, __pyx_n_s_warnings, __pyx_t_1) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 33; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0;
|
|
|
|
/* "sklearn/svm/libsvm.pyx":34
|
|
*
|
|
* import warnings
|
|
* import numpy as np # <<<<<<<<<<<<<<
|
|
* cimport numpy as np
|
|
* cimport libsvm
|
|
*/
|
|
__pyx_t_1 = __Pyx_Import(__pyx_n_s_numpy, 0, -1); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 34; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_1);
|
|
if (PyDict_SetItem(__pyx_d, __pyx_n_s_np, __pyx_t_1) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 34; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0;
|
|
|
|
/* "sklearn/svm/libsvm.pyx":43
|
|
* pass
|
|
*
|
|
* np.import_array() # <<<<<<<<<<<<<<
|
|
*
|
|
*
|
|
*/
|
|
import_array();
|
|
|
|
/* "sklearn/svm/libsvm.pyx":48
|
|
* ################################################################################
|
|
* # Internal variables
|
|
* LIBSVM_KERNEL_TYPES = ['linear', 'poly', 'rbf', 'sigmoid', 'precomputed'] # <<<<<<<<<<<<<<
|
|
*
|
|
*
|
|
*/
|
|
__pyx_t_1 = PyList_New(5); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 48; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_1);
|
|
__Pyx_INCREF(__pyx_n_s_linear);
|
|
PyList_SET_ITEM(__pyx_t_1, 0, __pyx_n_s_linear);
|
|
__Pyx_GIVEREF(__pyx_n_s_linear);
|
|
__Pyx_INCREF(__pyx_n_s_poly);
|
|
PyList_SET_ITEM(__pyx_t_1, 1, __pyx_n_s_poly);
|
|
__Pyx_GIVEREF(__pyx_n_s_poly);
|
|
__Pyx_INCREF(__pyx_n_s_rbf);
|
|
PyList_SET_ITEM(__pyx_t_1, 2, __pyx_n_s_rbf);
|
|
__Pyx_GIVEREF(__pyx_n_s_rbf);
|
|
__Pyx_INCREF(__pyx_n_s_sigmoid);
|
|
PyList_SET_ITEM(__pyx_t_1, 3, __pyx_n_s_sigmoid);
|
|
__Pyx_GIVEREF(__pyx_n_s_sigmoid);
|
|
__Pyx_INCREF(__pyx_n_s_precomputed);
|
|
PyList_SET_ITEM(__pyx_t_1, 4, __pyx_n_s_precomputed);
|
|
__Pyx_GIVEREF(__pyx_n_s_precomputed);
|
|
if (PyDict_SetItem(__pyx_d, __pyx_n_s_LIBSVM_KERNEL_TYPES, __pyx_t_1) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 48; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0;
|
|
|
|
/* "sklearn/svm/libsvm.pyx":61
|
|
* double C=1., double nu=0.5, double epsilon=0.1,
|
|
* np.ndarray[np.float64_t, ndim=1, mode='c']
|
|
* class_weight=np.empty(0), # <<<<<<<<<<<<<<
|
|
* np.ndarray[np.float64_t, ndim=1, mode='c']
|
|
* sample_weight=np.empty(0),
|
|
*/
|
|
__pyx_t_1 = __Pyx_GetModuleGlobalName(__pyx_n_s_np); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 61; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_1);
|
|
__pyx_t_2 = __Pyx_PyObject_GetAttrStr(__pyx_t_1, __pyx_n_s_empty); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 61; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_2);
|
|
__Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0;
|
|
__pyx_t_1 = __Pyx_PyObject_Call(__pyx_t_2, __pyx_tuple__35, NULL); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 61; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_1);
|
|
__Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0;
|
|
if (!(likely(((__pyx_t_1) == Py_None) || likely(__Pyx_TypeTest(__pyx_t_1, __pyx_ptype_5numpy_ndarray))))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 61; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__pyx_k_ = ((PyArrayObject *)__pyx_t_1);
|
|
__Pyx_GIVEREF(__pyx_t_1);
|
|
__pyx_t_1 = 0;
|
|
|
|
/* "sklearn/svm/libsvm.pyx":63
|
|
* class_weight=np.empty(0),
|
|
* np.ndarray[np.float64_t, ndim=1, mode='c']
|
|
* sample_weight=np.empty(0), # <<<<<<<<<<<<<<
|
|
* int shrinking=1, int probability=0,
|
|
* double cache_size=100.,
|
|
*/
|
|
__pyx_t_1 = __Pyx_GetModuleGlobalName(__pyx_n_s_np); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 63; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_1);
|
|
__pyx_t_2 = __Pyx_PyObject_GetAttrStr(__pyx_t_1, __pyx_n_s_empty); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 63; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_2);
|
|
__Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0;
|
|
__pyx_t_1 = __Pyx_PyObject_Call(__pyx_t_2, __pyx_tuple__36, NULL); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 63; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_1);
|
|
__Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0;
|
|
if (!(likely(((__pyx_t_1) == Py_None) || likely(__Pyx_TypeTest(__pyx_t_1, __pyx_ptype_5numpy_ndarray))))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 63; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__pyx_k__2 = ((PyArrayObject *)__pyx_t_1);
|
|
__Pyx_GIVEREF(__pyx_t_1);
|
|
__pyx_t_1 = 0;
|
|
|
|
/* "sklearn/svm/libsvm.pyx":54
|
|
* # Wrapper functions
|
|
*
|
|
* def fit( # <<<<<<<<<<<<<<
|
|
* np.ndarray[np.float64_t, ndim=2, mode='c'] X,
|
|
* np.ndarray[np.float64_t, ndim=1, mode='c'] Y,
|
|
*/
|
|
__pyx_t_1 = PyCFunction_NewEx(&__pyx_mdef_7sklearn_3svm_6libsvm_1fit, NULL, __pyx_n_s_sklearn_svm_libsvm); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 54; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_1);
|
|
if (PyDict_SetItem(__pyx_d, __pyx_n_s_fit, __pyx_t_1) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 54; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0;
|
|
|
|
/* "sklearn/svm/libsvm.pyx":276
|
|
* np.ndarray[np.float64_t, ndim=2, mode='c'] sv_coef,
|
|
* np.ndarray[np.float64_t, ndim=1, mode='c'] intercept,
|
|
* np.ndarray[np.float64_t, ndim=1, mode='c'] probA=np.empty(0), # <<<<<<<<<<<<<<
|
|
* np.ndarray[np.float64_t, ndim=1, mode='c'] probB=np.empty(0),
|
|
* int svm_type=0, kernel='rbf', int degree=3,
|
|
*/
|
|
__pyx_t_1 = __Pyx_GetModuleGlobalName(__pyx_n_s_np); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 276; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_1);
|
|
__pyx_t_2 = __Pyx_PyObject_GetAttrStr(__pyx_t_1, __pyx_n_s_empty); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 276; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_2);
|
|
__Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0;
|
|
__pyx_t_1 = __Pyx_PyObject_Call(__pyx_t_2, __pyx_tuple__39, NULL); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 276; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_1);
|
|
__Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0;
|
|
if (!(likely(((__pyx_t_1) == Py_None) || likely(__Pyx_TypeTest(__pyx_t_1, __pyx_ptype_5numpy_ndarray))))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 276; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__pyx_k__10 = ((PyArrayObject *)__pyx_t_1);
|
|
__Pyx_GIVEREF(__pyx_t_1);
|
|
__pyx_t_1 = 0;
|
|
|
|
/* "sklearn/svm/libsvm.pyx":277
|
|
* np.ndarray[np.float64_t, ndim=1, mode='c'] intercept,
|
|
* np.ndarray[np.float64_t, ndim=1, mode='c'] probA=np.empty(0),
|
|
* np.ndarray[np.float64_t, ndim=1, mode='c'] probB=np.empty(0), # <<<<<<<<<<<<<<
|
|
* int svm_type=0, kernel='rbf', int degree=3,
|
|
* double gamma=0.1, double coef0=0.,
|
|
*/
|
|
__pyx_t_1 = __Pyx_GetModuleGlobalName(__pyx_n_s_np); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 277; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_1);
|
|
__pyx_t_2 = __Pyx_PyObject_GetAttrStr(__pyx_t_1, __pyx_n_s_empty); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 277; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_2);
|
|
__Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0;
|
|
__pyx_t_1 = __Pyx_PyObject_Call(__pyx_t_2, __pyx_tuple__40, NULL); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 277; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_1);
|
|
__Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0;
|
|
if (!(likely(((__pyx_t_1) == Py_None) || likely(__Pyx_TypeTest(__pyx_t_1, __pyx_ptype_5numpy_ndarray))))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 277; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__pyx_k__11 = ((PyArrayObject *)__pyx_t_1);
|
|
__Pyx_GIVEREF(__pyx_t_1);
|
|
__pyx_t_1 = 0;
|
|
|
|
/* "sklearn/svm/libsvm.pyx":281
|
|
* double gamma=0.1, double coef0=0.,
|
|
* np.ndarray[np.float64_t, ndim=1, mode='c']
|
|
* class_weight=np.empty(0), # <<<<<<<<<<<<<<
|
|
* np.ndarray[np.float64_t, ndim=1, mode='c']
|
|
* sample_weight=np.empty(0),
|
|
*/
|
|
__pyx_t_1 = __Pyx_GetModuleGlobalName(__pyx_n_s_np); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 281; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_1);
|
|
__pyx_t_2 = __Pyx_PyObject_GetAttrStr(__pyx_t_1, __pyx_n_s_empty); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 281; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_2);
|
|
__Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0;
|
|
__pyx_t_1 = __Pyx_PyObject_Call(__pyx_t_2, __pyx_tuple__41, NULL); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 281; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_1);
|
|
__Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0;
|
|
if (!(likely(((__pyx_t_1) == Py_None) || likely(__Pyx_TypeTest(__pyx_t_1, __pyx_ptype_5numpy_ndarray))))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 281; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__pyx_k__12 = ((PyArrayObject *)__pyx_t_1);
|
|
__Pyx_GIVEREF(__pyx_t_1);
|
|
__pyx_t_1 = 0;
|
|
|
|
/* "sklearn/svm/libsvm.pyx":283
|
|
* class_weight=np.empty(0),
|
|
* np.ndarray[np.float64_t, ndim=1, mode='c']
|
|
* sample_weight=np.empty(0), # <<<<<<<<<<<<<<
|
|
* double cache_size=100.):
|
|
* """
|
|
*/
|
|
__pyx_t_1 = __Pyx_GetModuleGlobalName(__pyx_n_s_np); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 283; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_1);
|
|
__pyx_t_2 = __Pyx_PyObject_GetAttrStr(__pyx_t_1, __pyx_n_s_empty); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 283; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_2);
|
|
__Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0;
|
|
__pyx_t_1 = __Pyx_PyObject_Call(__pyx_t_2, __pyx_tuple__42, NULL); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 283; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_1);
|
|
__Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0;
|
|
if (!(likely(((__pyx_t_1) == Py_None) || likely(__Pyx_TypeTest(__pyx_t_1, __pyx_ptype_5numpy_ndarray))))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 283; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__pyx_k__13 = ((PyArrayObject *)__pyx_t_1);
|
|
__Pyx_GIVEREF(__pyx_t_1);
|
|
__pyx_t_1 = 0;
|
|
|
|
/* "sklearn/svm/libsvm.pyx":270
|
|
*
|
|
*
|
|
* def predict(np.ndarray[np.float64_t, ndim=2, mode='c'] X, # <<<<<<<<<<<<<<
|
|
* np.ndarray[np.int32_t, ndim=1, mode='c'] support,
|
|
* np.ndarray[np.float64_t, ndim=2, mode='c'] SV,
|
|
*/
|
|
__pyx_t_1 = PyCFunction_NewEx(&__pyx_mdef_7sklearn_3svm_6libsvm_3predict, NULL, __pyx_n_s_sklearn_svm_libsvm); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 270; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_1);
|
|
if (PyDict_SetItem(__pyx_d, __pyx_n_s_predict, __pyx_t_1) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 270; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0;
|
|
|
|
/* "sklearn/svm/libsvm.pyx":342
|
|
* np.ndarray[np.float64_t, ndim=2, mode='c'] sv_coef,
|
|
* np.ndarray[np.float64_t, ndim=1, mode='c'] intercept,
|
|
* np.ndarray[np.float64_t, ndim=1, mode='c'] probA=np.empty(0), # <<<<<<<<<<<<<<
|
|
* np.ndarray[np.float64_t, ndim=1, mode='c'] probB=np.empty(0),
|
|
* int svm_type=0, str kernel='rbf', int degree=3,
|
|
*/
|
|
__pyx_t_1 = __Pyx_GetModuleGlobalName(__pyx_n_s_np); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 342; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_1);
|
|
__pyx_t_2 = __Pyx_PyObject_GetAttrStr(__pyx_t_1, __pyx_n_s_empty); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 342; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_2);
|
|
__Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0;
|
|
__pyx_t_1 = __Pyx_PyObject_Call(__pyx_t_2, __pyx_tuple__45, NULL); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 342; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_1);
|
|
__Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0;
|
|
if (!(likely(((__pyx_t_1) == Py_None) || likely(__Pyx_TypeTest(__pyx_t_1, __pyx_ptype_5numpy_ndarray))))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 342; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__pyx_k__15 = ((PyArrayObject *)__pyx_t_1);
|
|
__Pyx_GIVEREF(__pyx_t_1);
|
|
__pyx_t_1 = 0;
|
|
|
|
/* "sklearn/svm/libsvm.pyx":343
|
|
* np.ndarray[np.float64_t, ndim=1, mode='c'] intercept,
|
|
* np.ndarray[np.float64_t, ndim=1, mode='c'] probA=np.empty(0),
|
|
* np.ndarray[np.float64_t, ndim=1, mode='c'] probB=np.empty(0), # <<<<<<<<<<<<<<
|
|
* int svm_type=0, str kernel='rbf', int degree=3,
|
|
* double gamma=0.1, double coef0=0.,
|
|
*/
|
|
__pyx_t_1 = __Pyx_GetModuleGlobalName(__pyx_n_s_np); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 343; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_1);
|
|
__pyx_t_2 = __Pyx_PyObject_GetAttrStr(__pyx_t_1, __pyx_n_s_empty); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 343; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_2);
|
|
__Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0;
|
|
__pyx_t_1 = __Pyx_PyObject_Call(__pyx_t_2, __pyx_tuple__46, NULL); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 343; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_1);
|
|
__Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0;
|
|
if (!(likely(((__pyx_t_1) == Py_None) || likely(__Pyx_TypeTest(__pyx_t_1, __pyx_ptype_5numpy_ndarray))))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 343; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__pyx_k__16 = ((PyArrayObject *)__pyx_t_1);
|
|
__Pyx_GIVEREF(__pyx_t_1);
|
|
__pyx_t_1 = 0;
|
|
|
|
/* "sklearn/svm/libsvm.pyx":347
|
|
* double gamma=0.1, double coef0=0.,
|
|
* np.ndarray[np.float64_t, ndim=1, mode='c']
|
|
* class_weight=np.empty(0), # <<<<<<<<<<<<<<
|
|
* np.ndarray[np.float64_t, ndim=1, mode='c']
|
|
* sample_weight=np.empty(0),
|
|
*/
|
|
__pyx_t_1 = __Pyx_GetModuleGlobalName(__pyx_n_s_np); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 347; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_1);
|
|
__pyx_t_2 = __Pyx_PyObject_GetAttrStr(__pyx_t_1, __pyx_n_s_empty); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 347; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_2);
|
|
__Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0;
|
|
__pyx_t_1 = __Pyx_PyObject_Call(__pyx_t_2, __pyx_tuple__47, NULL); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 347; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_1);
|
|
__Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0;
|
|
if (!(likely(((__pyx_t_1) == Py_None) || likely(__Pyx_TypeTest(__pyx_t_1, __pyx_ptype_5numpy_ndarray))))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 347; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__pyx_k__17 = ((PyArrayObject *)__pyx_t_1);
|
|
__Pyx_GIVEREF(__pyx_t_1);
|
|
__pyx_t_1 = 0;
|
|
|
|
/* "sklearn/svm/libsvm.pyx":349
|
|
* class_weight=np.empty(0),
|
|
* np.ndarray[np.float64_t, ndim=1, mode='c']
|
|
* sample_weight=np.empty(0), # <<<<<<<<<<<<<<
|
|
* double cache_size=100.):
|
|
* """
|
|
*/
|
|
__pyx_t_1 = __Pyx_GetModuleGlobalName(__pyx_n_s_np); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 349; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_1);
|
|
__pyx_t_2 = __Pyx_PyObject_GetAttrStr(__pyx_t_1, __pyx_n_s_empty); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 349; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_2);
|
|
__Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0;
|
|
__pyx_t_1 = __Pyx_PyObject_Call(__pyx_t_2, __pyx_tuple__48, NULL); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 349; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_1);
|
|
__Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0;
|
|
if (!(likely(((__pyx_t_1) == Py_None) || likely(__Pyx_TypeTest(__pyx_t_1, __pyx_ptype_5numpy_ndarray))))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 349; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__pyx_k__18 = ((PyArrayObject *)__pyx_t_1);
|
|
__Pyx_GIVEREF(__pyx_t_1);
|
|
__pyx_t_1 = 0;
|
|
|
|
/* "sklearn/svm/libsvm.pyx":335
|
|
*
|
|
*
|
|
* def predict_proba( # <<<<<<<<<<<<<<
|
|
* np.ndarray[np.float64_t, ndim=2, mode='c'] X,
|
|
* np.ndarray[np.int32_t, ndim=1, mode='c'] support,
|
|
*/
|
|
__pyx_t_1 = PyCFunction_NewEx(&__pyx_mdef_7sklearn_3svm_6libsvm_5predict_proba, NULL, __pyx_n_s_sklearn_svm_libsvm); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 335; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_1);
|
|
if (PyDict_SetItem(__pyx_d, __pyx_n_s_predict_proba, __pyx_t_1) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 335; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0;
|
|
|
|
/* "sklearn/svm/libsvm.pyx":409
|
|
* np.ndarray[np.float64_t, ndim=2, mode='c'] sv_coef,
|
|
* np.ndarray[np.float64_t, ndim=1, mode='c'] intercept,
|
|
* np.ndarray[np.float64_t, ndim=1, mode='c'] probA=np.empty(0), # <<<<<<<<<<<<<<
|
|
* np.ndarray[np.float64_t, ndim=1, mode='c'] probB=np.empty(0),
|
|
* int svm_type=0, kernel='rbf', int degree=3,
|
|
*/
|
|
__pyx_t_1 = __Pyx_GetModuleGlobalName(__pyx_n_s_np); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 409; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_1);
|
|
__pyx_t_2 = __Pyx_PyObject_GetAttrStr(__pyx_t_1, __pyx_n_s_empty); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 409; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_2);
|
|
__Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0;
|
|
__pyx_t_1 = __Pyx_PyObject_Call(__pyx_t_2, __pyx_tuple__51, NULL); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 409; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_1);
|
|
__Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0;
|
|
if (!(likely(((__pyx_t_1) == Py_None) || likely(__Pyx_TypeTest(__pyx_t_1, __pyx_ptype_5numpy_ndarray))))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 409; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__pyx_k__20 = ((PyArrayObject *)__pyx_t_1);
|
|
__Pyx_GIVEREF(__pyx_t_1);
|
|
__pyx_t_1 = 0;
|
|
|
|
/* "sklearn/svm/libsvm.pyx":410
|
|
* np.ndarray[np.float64_t, ndim=1, mode='c'] intercept,
|
|
* np.ndarray[np.float64_t, ndim=1, mode='c'] probA=np.empty(0),
|
|
* np.ndarray[np.float64_t, ndim=1, mode='c'] probB=np.empty(0), # <<<<<<<<<<<<<<
|
|
* int svm_type=0, kernel='rbf', int degree=3,
|
|
* double gamma=0.1, double coef0=0.,
|
|
*/
|
|
__pyx_t_1 = __Pyx_GetModuleGlobalName(__pyx_n_s_np); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 410; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_1);
|
|
__pyx_t_2 = __Pyx_PyObject_GetAttrStr(__pyx_t_1, __pyx_n_s_empty); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 410; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_2);
|
|
__Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0;
|
|
__pyx_t_1 = __Pyx_PyObject_Call(__pyx_t_2, __pyx_tuple__52, NULL); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 410; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_1);
|
|
__Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0;
|
|
if (!(likely(((__pyx_t_1) == Py_None) || likely(__Pyx_TypeTest(__pyx_t_1, __pyx_ptype_5numpy_ndarray))))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 410; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__pyx_k__21 = ((PyArrayObject *)__pyx_t_1);
|
|
__Pyx_GIVEREF(__pyx_t_1);
|
|
__pyx_t_1 = 0;
|
|
|
|
/* "sklearn/svm/libsvm.pyx":414
|
|
* double gamma=0.1, double coef0=0.,
|
|
* np.ndarray[np.float64_t, ndim=1, mode='c']
|
|
* class_weight=np.empty(0), # <<<<<<<<<<<<<<
|
|
* np.ndarray[np.float64_t, ndim=1, mode='c']
|
|
* sample_weight=np.empty(0),
|
|
*/
|
|
__pyx_t_1 = __Pyx_GetModuleGlobalName(__pyx_n_s_np); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 414; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_1);
|
|
__pyx_t_2 = __Pyx_PyObject_GetAttrStr(__pyx_t_1, __pyx_n_s_empty); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 414; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_2);
|
|
__Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0;
|
|
__pyx_t_1 = __Pyx_PyObject_Call(__pyx_t_2, __pyx_tuple__53, NULL); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 414; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_1);
|
|
__Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0;
|
|
if (!(likely(((__pyx_t_1) == Py_None) || likely(__Pyx_TypeTest(__pyx_t_1, __pyx_ptype_5numpy_ndarray))))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 414; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__pyx_k__22 = ((PyArrayObject *)__pyx_t_1);
|
|
__Pyx_GIVEREF(__pyx_t_1);
|
|
__pyx_t_1 = 0;
|
|
|
|
/* "sklearn/svm/libsvm.pyx":416
|
|
* class_weight=np.empty(0),
|
|
* np.ndarray[np.float64_t, ndim=1, mode='c']
|
|
* sample_weight=np.empty(0), # <<<<<<<<<<<<<<
|
|
* double cache_size=100.):
|
|
* """
|
|
*/
|
|
__pyx_t_1 = __Pyx_GetModuleGlobalName(__pyx_n_s_np); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 416; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_1);
|
|
__pyx_t_2 = __Pyx_PyObject_GetAttrStr(__pyx_t_1, __pyx_n_s_empty); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 416; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_2);
|
|
__Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0;
|
|
__pyx_t_1 = __Pyx_PyObject_Call(__pyx_t_2, __pyx_tuple__54, NULL); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 416; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_1);
|
|
__Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0;
|
|
if (!(likely(((__pyx_t_1) == Py_None) || likely(__Pyx_TypeTest(__pyx_t_1, __pyx_ptype_5numpy_ndarray))))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 416; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__pyx_k__23 = ((PyArrayObject *)__pyx_t_1);
|
|
__Pyx_GIVEREF(__pyx_t_1);
|
|
__pyx_t_1 = 0;
|
|
|
|
/* "sklearn/svm/libsvm.pyx":402
|
|
*
|
|
*
|
|
* def decision_function( # <<<<<<<<<<<<<<
|
|
* np.ndarray[np.float64_t, ndim=2, mode='c'] X,
|
|
* np.ndarray[np.int32_t, ndim=1, mode='c'] support,
|
|
*/
|
|
__pyx_t_1 = PyCFunction_NewEx(&__pyx_mdef_7sklearn_3svm_6libsvm_7decision_function, NULL, __pyx_n_s_sklearn_svm_libsvm); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 402; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_1);
|
|
if (PyDict_SetItem(__pyx_d, __pyx_n_s_decision_function, __pyx_t_1) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 402; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0;
|
|
|
|
/* "sklearn/svm/libsvm.pyx":468
|
|
* double C=1., double nu=0.5, double epsilon=0.1,
|
|
* np.ndarray[np.float64_t, ndim=1, mode='c']
|
|
* class_weight=np.empty(0), # <<<<<<<<<<<<<<
|
|
* np.ndarray[np.float64_t, ndim=1, mode='c']
|
|
* sample_weight=np.empty(0),
|
|
*/
|
|
__pyx_t_1 = __Pyx_GetModuleGlobalName(__pyx_n_s_np); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 468; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_1);
|
|
__pyx_t_2 = __Pyx_PyObject_GetAttrStr(__pyx_t_1, __pyx_n_s_empty); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 468; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_2);
|
|
__Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0;
|
|
__pyx_t_1 = __Pyx_PyObject_Call(__pyx_t_2, __pyx_tuple__57, NULL); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 468; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_1);
|
|
__Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0;
|
|
if (!(likely(((__pyx_t_1) == Py_None) || likely(__Pyx_TypeTest(__pyx_t_1, __pyx_ptype_5numpy_ndarray))))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 468; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__pyx_k__25 = ((PyArrayObject *)__pyx_t_1);
|
|
__Pyx_GIVEREF(__pyx_t_1);
|
|
__pyx_t_1 = 0;
|
|
|
|
/* "sklearn/svm/libsvm.pyx":470
|
|
* class_weight=np.empty(0),
|
|
* np.ndarray[np.float64_t, ndim=1, mode='c']
|
|
* sample_weight=np.empty(0), # <<<<<<<<<<<<<<
|
|
* int shrinking=0, int probability=0, double cache_size=100.,
|
|
* int max_iter=-1,
|
|
*/
|
|
__pyx_t_1 = __Pyx_GetModuleGlobalName(__pyx_n_s_np); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 470; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_1);
|
|
__pyx_t_2 = __Pyx_PyObject_GetAttrStr(__pyx_t_1, __pyx_n_s_empty); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 470; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_2);
|
|
__Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0;
|
|
__pyx_t_1 = __Pyx_PyObject_Call(__pyx_t_2, __pyx_tuple__58, NULL); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 470; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_1);
|
|
__Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0;
|
|
if (!(likely(((__pyx_t_1) == Py_None) || likely(__Pyx_TypeTest(__pyx_t_1, __pyx_ptype_5numpy_ndarray))))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 470; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__pyx_k__26 = ((PyArrayObject *)__pyx_t_1);
|
|
__Pyx_GIVEREF(__pyx_t_1);
|
|
__pyx_t_1 = 0;
|
|
|
|
/* "sklearn/svm/libsvm.pyx":461
|
|
*
|
|
*
|
|
* def cross_validation( # <<<<<<<<<<<<<<
|
|
* np.ndarray[np.float64_t, ndim=2, mode='c'] X,
|
|
* np.ndarray[np.float64_t, ndim=1, mode='c'] Y,
|
|
*/
|
|
__pyx_t_1 = PyCFunction_NewEx(&__pyx_mdef_7sklearn_3svm_6libsvm_9cross_validation, NULL, __pyx_n_s_sklearn_svm_libsvm); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 461; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_1);
|
|
if (PyDict_SetItem(__pyx_d, __pyx_n_s_cross_validation, __pyx_t_1) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 461; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0;
|
|
|
|
/* "sklearn/svm/libsvm.pyx":572
|
|
*
|
|
*
|
|
* def set_verbosity_wrap(int verbosity): # <<<<<<<<<<<<<<
|
|
* """
|
|
* Control verbosity of libsvm library
|
|
*/
|
|
__pyx_t_1 = PyCFunction_NewEx(&__pyx_mdef_7sklearn_3svm_6libsvm_11set_verbosity_wrap, NULL, __pyx_n_s_sklearn_svm_libsvm); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 572; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_1);
|
|
if (PyDict_SetItem(__pyx_d, __pyx_n_s_set_verbosity_wrap, __pyx_t_1) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 572; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0;
|
|
|
|
/* "sklearn/svm/libsvm.pyx":1
|
|
* """ # <<<<<<<<<<<<<<
|
|
* Binding for libsvm_skl
|
|
* ----------------------
|
|
*/
|
|
__pyx_t_1 = PyDict_New(); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_GOTREF(__pyx_t_1);
|
|
if (PyDict_SetItem(__pyx_d, __pyx_n_s_test, __pyx_t_1) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;}
|
|
__Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0;
|
|
|
|
/* "/usr/local/lib/python2.7/dist-packages/Cython/Includes/numpy/__init__.pxd":976
|
|
* arr.base = baseptr
|
|
*
|
|
* cdef inline object get_array_base(ndarray arr): # <<<<<<<<<<<<<<
|
|
* if arr.base is NULL:
|
|
* return None
|
|
*/
|
|
goto __pyx_L0;
|
|
__pyx_L1_error:;
|
|
__Pyx_XDECREF(__pyx_t_1);
|
|
__Pyx_XDECREF(__pyx_t_2);
|
|
if (__pyx_m) {
|
|
__Pyx_AddTraceback("init sklearn.svm.libsvm", __pyx_clineno, __pyx_lineno, __pyx_filename);
|
|
Py_DECREF(__pyx_m); __pyx_m = 0;
|
|
} else if (!PyErr_Occurred()) {
|
|
PyErr_SetString(PyExc_ImportError, "init sklearn.svm.libsvm");
|
|
}
|
|
__pyx_L0:;
|
|
__Pyx_RefNannyFinishContext();
|
|
#if PY_MAJOR_VERSION < 3
|
|
return;
|
|
#else
|
|
return __pyx_m;
|
|
#endif
|
|
}
|
|
|
|
/* Runtime support code */
|
|
#if CYTHON_REFNANNY
|
|
static __Pyx_RefNannyAPIStruct *__Pyx_RefNannyImportAPI(const char *modname) {
|
|
PyObject *m = NULL, *p = NULL;
|
|
void *r = NULL;
|
|
m = PyImport_ImportModule((char *)modname);
|
|
if (!m) goto end;
|
|
p = PyObject_GetAttrString(m, (char *)"RefNannyAPI");
|
|
if (!p) goto end;
|
|
r = PyLong_AsVoidPtr(p);
|
|
end:
|
|
Py_XDECREF(p);
|
|
Py_XDECREF(m);
|
|
return (__Pyx_RefNannyAPIStruct *)r;
|
|
}
|
|
#endif /* CYTHON_REFNANNY */
|
|
|
|
static PyObject *__Pyx_GetBuiltinName(PyObject *name) {
|
|
PyObject* result = __Pyx_PyObject_GetAttrStr(__pyx_b, name);
|
|
if (unlikely(!result)) {
|
|
PyErr_Format(PyExc_NameError,
|
|
#if PY_MAJOR_VERSION >= 3
|
|
"name '%U' is not defined", name);
|
|
#else
|
|
"name '%.200s' is not defined", PyString_AS_STRING(name));
|
|
#endif
|
|
}
|
|
return result;
|
|
}
|
|
|
|
static void __Pyx_RaiseArgtupleInvalid(
|
|
const char* func_name,
|
|
int exact,
|
|
Py_ssize_t num_min,
|
|
Py_ssize_t num_max,
|
|
Py_ssize_t num_found)
|
|
{
|
|
Py_ssize_t num_expected;
|
|
const char *more_or_less;
|
|
if (num_found < num_min) {
|
|
num_expected = num_min;
|
|
more_or_less = "at least";
|
|
} else {
|
|
num_expected = num_max;
|
|
more_or_less = "at most";
|
|
}
|
|
if (exact) {
|
|
more_or_less = "exactly";
|
|
}
|
|
PyErr_Format(PyExc_TypeError,
|
|
"%.200s() takes %.8s %" CYTHON_FORMAT_SSIZE_T "d positional argument%.1s (%" CYTHON_FORMAT_SSIZE_T "d given)",
|
|
func_name, more_or_less, num_expected,
|
|
(num_expected == 1) ? "" : "s", num_found);
|
|
}
|
|
|
|
static void __Pyx_RaiseDoubleKeywordsError(
|
|
const char* func_name,
|
|
PyObject* kw_name)
|
|
{
|
|
PyErr_Format(PyExc_TypeError,
|
|
#if PY_MAJOR_VERSION >= 3
|
|
"%s() got multiple values for keyword argument '%U'", func_name, kw_name);
|
|
#else
|
|
"%s() got multiple values for keyword argument '%s'", func_name,
|
|
PyString_AsString(kw_name));
|
|
#endif
|
|
}
|
|
|
|
static int __Pyx_ParseOptionalKeywords(
|
|
PyObject *kwds,
|
|
PyObject **argnames[],
|
|
PyObject *kwds2,
|
|
PyObject *values[],
|
|
Py_ssize_t num_pos_args,
|
|
const char* function_name)
|
|
{
|
|
PyObject *key = 0, *value = 0;
|
|
Py_ssize_t pos = 0;
|
|
PyObject*** name;
|
|
PyObject*** first_kw_arg = argnames + num_pos_args;
|
|
while (PyDict_Next(kwds, &pos, &key, &value)) {
|
|
name = first_kw_arg;
|
|
while (*name && (**name != key)) name++;
|
|
if (*name) {
|
|
values[name-argnames] = value;
|
|
continue;
|
|
}
|
|
name = first_kw_arg;
|
|
#if PY_MAJOR_VERSION < 3
|
|
if (likely(PyString_CheckExact(key)) || likely(PyString_Check(key))) {
|
|
while (*name) {
|
|
if ((CYTHON_COMPILING_IN_PYPY || PyString_GET_SIZE(**name) == PyString_GET_SIZE(key))
|
|
&& _PyString_Eq(**name, key)) {
|
|
values[name-argnames] = value;
|
|
break;
|
|
}
|
|
name++;
|
|
}
|
|
if (*name) continue;
|
|
else {
|
|
PyObject*** argname = argnames;
|
|
while (argname != first_kw_arg) {
|
|
if ((**argname == key) || (
|
|
(CYTHON_COMPILING_IN_PYPY || PyString_GET_SIZE(**argname) == PyString_GET_SIZE(key))
|
|
&& _PyString_Eq(**argname, key))) {
|
|
goto arg_passed_twice;
|
|
}
|
|
argname++;
|
|
}
|
|
}
|
|
} else
|
|
#endif
|
|
if (likely(PyUnicode_Check(key))) {
|
|
while (*name) {
|
|
int cmp = (**name == key) ? 0 :
|
|
#if !CYTHON_COMPILING_IN_PYPY && PY_MAJOR_VERSION >= 3
|
|
(PyUnicode_GET_SIZE(**name) != PyUnicode_GET_SIZE(key)) ? 1 :
|
|
#endif
|
|
PyUnicode_Compare(**name, key);
|
|
if (cmp < 0 && unlikely(PyErr_Occurred())) goto bad;
|
|
if (cmp == 0) {
|
|
values[name-argnames] = value;
|
|
break;
|
|
}
|
|
name++;
|
|
}
|
|
if (*name) continue;
|
|
else {
|
|
PyObject*** argname = argnames;
|
|
while (argname != first_kw_arg) {
|
|
int cmp = (**argname == key) ? 0 :
|
|
#if !CYTHON_COMPILING_IN_PYPY && PY_MAJOR_VERSION >= 3
|
|
(PyUnicode_GET_SIZE(**argname) != PyUnicode_GET_SIZE(key)) ? 1 :
|
|
#endif
|
|
PyUnicode_Compare(**argname, key);
|
|
if (cmp < 0 && unlikely(PyErr_Occurred())) goto bad;
|
|
if (cmp == 0) goto arg_passed_twice;
|
|
argname++;
|
|
}
|
|
}
|
|
} else
|
|
goto invalid_keyword_type;
|
|
if (kwds2) {
|
|
if (unlikely(PyDict_SetItem(kwds2, key, value))) goto bad;
|
|
} else {
|
|
goto invalid_keyword;
|
|
}
|
|
}
|
|
return 0;
|
|
arg_passed_twice:
|
|
__Pyx_RaiseDoubleKeywordsError(function_name, key);
|
|
goto bad;
|
|
invalid_keyword_type:
|
|
PyErr_Format(PyExc_TypeError,
|
|
"%.200s() keywords must be strings", function_name);
|
|
goto bad;
|
|
invalid_keyword:
|
|
PyErr_Format(PyExc_TypeError,
|
|
#if PY_MAJOR_VERSION < 3
|
|
"%.200s() got an unexpected keyword argument '%.200s'",
|
|
function_name, PyString_AsString(key));
|
|
#else
|
|
"%s() got an unexpected keyword argument '%U'",
|
|
function_name, key);
|
|
#endif
|
|
bad:
|
|
return -1;
|
|
}
|
|
|
|
static void __Pyx_RaiseArgumentTypeInvalid(const char* name, PyObject *obj, PyTypeObject *type) {
|
|
PyErr_Format(PyExc_TypeError,
|
|
"Argument '%.200s' has incorrect type (expected %.200s, got %.200s)",
|
|
name, type->tp_name, Py_TYPE(obj)->tp_name);
|
|
}
|
|
static CYTHON_INLINE int __Pyx_ArgTypeTest(PyObject *obj, PyTypeObject *type, int none_allowed,
|
|
const char *name, int exact)
|
|
{
|
|
if (unlikely(!type)) {
|
|
PyErr_SetString(PyExc_SystemError, "Missing type object");
|
|
return 0;
|
|
}
|
|
if (none_allowed && obj == Py_None) return 1;
|
|
else if (exact) {
|
|
if (likely(Py_TYPE(obj) == type)) return 1;
|
|
#if PY_MAJOR_VERSION == 2
|
|
else if ((type == &PyBaseString_Type) && likely(__Pyx_PyBaseString_CheckExact(obj))) return 1;
|
|
#endif
|
|
}
|
|
else {
|
|
if (likely(PyObject_TypeCheck(obj, type))) return 1;
|
|
}
|
|
__Pyx_RaiseArgumentTypeInvalid(name, obj, type);
|
|
return 0;
|
|
}
|
|
|
|
static CYTHON_INLINE int __Pyx_IsLittleEndian(void) {
|
|
unsigned int n = 1;
|
|
return *(unsigned char*)(&n) != 0;
|
|
}
|
|
static void __Pyx_BufFmt_Init(__Pyx_BufFmt_Context* ctx,
|
|
__Pyx_BufFmt_StackElem* stack,
|
|
__Pyx_TypeInfo* type) {
|
|
stack[0].field = &ctx->root;
|
|
stack[0].parent_offset = 0;
|
|
ctx->root.type = type;
|
|
ctx->root.name = "buffer dtype";
|
|
ctx->root.offset = 0;
|
|
ctx->head = stack;
|
|
ctx->head->field = &ctx->root;
|
|
ctx->fmt_offset = 0;
|
|
ctx->head->parent_offset = 0;
|
|
ctx->new_packmode = '@';
|
|
ctx->enc_packmode = '@';
|
|
ctx->new_count = 1;
|
|
ctx->enc_count = 0;
|
|
ctx->enc_type = 0;
|
|
ctx->is_complex = 0;
|
|
ctx->is_valid_array = 0;
|
|
ctx->struct_alignment = 0;
|
|
while (type->typegroup == 'S') {
|
|
++ctx->head;
|
|
ctx->head->field = type->fields;
|
|
ctx->head->parent_offset = 0;
|
|
type = type->fields->type;
|
|
}
|
|
}
|
|
static int __Pyx_BufFmt_ParseNumber(const char** ts) {
|
|
int count;
|
|
const char* t = *ts;
|
|
if (*t < '0' || *t > '9') {
|
|
return -1;
|
|
} else {
|
|
count = *t++ - '0';
|
|
while (*t >= '0' && *t < '9') {
|
|
count *= 10;
|
|
count += *t++ - '0';
|
|
}
|
|
}
|
|
*ts = t;
|
|
return count;
|
|
}
|
|
static int __Pyx_BufFmt_ExpectNumber(const char **ts) {
|
|
int number = __Pyx_BufFmt_ParseNumber(ts);
|
|
if (number == -1) /* First char was not a digit */
|
|
PyErr_Format(PyExc_ValueError,\
|
|
"Does not understand character buffer dtype format string ('%c')", **ts);
|
|
return number;
|
|
}
|
|
static void __Pyx_BufFmt_RaiseUnexpectedChar(char ch) {
|
|
PyErr_Format(PyExc_ValueError,
|
|
"Unexpected format string character: '%c'", ch);
|
|
}
|
|
static const char* __Pyx_BufFmt_DescribeTypeChar(char ch, int is_complex) {
|
|
switch (ch) {
|
|
case 'c': return "'char'";
|
|
case 'b': return "'signed char'";
|
|
case 'B': return "'unsigned char'";
|
|
case 'h': return "'short'";
|
|
case 'H': return "'unsigned short'";
|
|
case 'i': return "'int'";
|
|
case 'I': return "'unsigned int'";
|
|
case 'l': return "'long'";
|
|
case 'L': return "'unsigned long'";
|
|
case 'q': return "'long long'";
|
|
case 'Q': return "'unsigned long long'";
|
|
case 'f': return (is_complex ? "'complex float'" : "'float'");
|
|
case 'd': return (is_complex ? "'complex double'" : "'double'");
|
|
case 'g': return (is_complex ? "'complex long double'" : "'long double'");
|
|
case 'T': return "a struct";
|
|
case 'O': return "Python object";
|
|
case 'P': return "a pointer";
|
|
case 's': case 'p': return "a string";
|
|
case 0: return "end";
|
|
default: return "unparseable format string";
|
|
}
|
|
}
|
|
static size_t __Pyx_BufFmt_TypeCharToStandardSize(char ch, int is_complex) {
|
|
switch (ch) {
|
|
case '?': case 'c': case 'b': case 'B': case 's': case 'p': return 1;
|
|
case 'h': case 'H': return 2;
|
|
case 'i': case 'I': case 'l': case 'L': return 4;
|
|
case 'q': case 'Q': return 8;
|
|
case 'f': return (is_complex ? 8 : 4);
|
|
case 'd': return (is_complex ? 16 : 8);
|
|
case 'g': {
|
|
PyErr_SetString(PyExc_ValueError, "Python does not define a standard format string size for long double ('g')..");
|
|
return 0;
|
|
}
|
|
case 'O': case 'P': return sizeof(void*);
|
|
default:
|
|
__Pyx_BufFmt_RaiseUnexpectedChar(ch);
|
|
return 0;
|
|
}
|
|
}
|
|
static size_t __Pyx_BufFmt_TypeCharToNativeSize(char ch, int is_complex) {
|
|
switch (ch) {
|
|
case 'c': case 'b': case 'B': case 's': case 'p': return 1;
|
|
case 'h': case 'H': return sizeof(short);
|
|
case 'i': case 'I': return sizeof(int);
|
|
case 'l': case 'L': return sizeof(long);
|
|
#ifdef HAVE_LONG_LONG
|
|
case 'q': case 'Q': return sizeof(PY_LONG_LONG);
|
|
#endif
|
|
case 'f': return sizeof(float) * (is_complex ? 2 : 1);
|
|
case 'd': return sizeof(double) * (is_complex ? 2 : 1);
|
|
case 'g': return sizeof(long double) * (is_complex ? 2 : 1);
|
|
case 'O': case 'P': return sizeof(void*);
|
|
default: {
|
|
__Pyx_BufFmt_RaiseUnexpectedChar(ch);
|
|
return 0;
|
|
}
|
|
}
|
|
}
|
|
typedef struct { char c; short x; } __Pyx_st_short;
|
|
typedef struct { char c; int x; } __Pyx_st_int;
|
|
typedef struct { char c; long x; } __Pyx_st_long;
|
|
typedef struct { char c; float x; } __Pyx_st_float;
|
|
typedef struct { char c; double x; } __Pyx_st_double;
|
|
typedef struct { char c; long double x; } __Pyx_st_longdouble;
|
|
typedef struct { char c; void *x; } __Pyx_st_void_p;
|
|
#ifdef HAVE_LONG_LONG
|
|
typedef struct { char c; PY_LONG_LONG x; } __Pyx_st_longlong;
|
|
#endif
|
|
static size_t __Pyx_BufFmt_TypeCharToAlignment(char ch, CYTHON_UNUSED int is_complex) {
|
|
switch (ch) {
|
|
case '?': case 'c': case 'b': case 'B': case 's': case 'p': return 1;
|
|
case 'h': case 'H': return sizeof(__Pyx_st_short) - sizeof(short);
|
|
case 'i': case 'I': return sizeof(__Pyx_st_int) - sizeof(int);
|
|
case 'l': case 'L': return sizeof(__Pyx_st_long) - sizeof(long);
|
|
#ifdef HAVE_LONG_LONG
|
|
case 'q': case 'Q': return sizeof(__Pyx_st_longlong) - sizeof(PY_LONG_LONG);
|
|
#endif
|
|
case 'f': return sizeof(__Pyx_st_float) - sizeof(float);
|
|
case 'd': return sizeof(__Pyx_st_double) - sizeof(double);
|
|
case 'g': return sizeof(__Pyx_st_longdouble) - sizeof(long double);
|
|
case 'P': case 'O': return sizeof(__Pyx_st_void_p) - sizeof(void*);
|
|
default:
|
|
__Pyx_BufFmt_RaiseUnexpectedChar(ch);
|
|
return 0;
|
|
}
|
|
}
|
|
/* These are for computing the padding at the end of the struct to align
|
|
on the first member of the struct. This will probably the same as above,
|
|
but we don't have any guarantees.
|
|
*/
|
|
typedef struct { short x; char c; } __Pyx_pad_short;
|
|
typedef struct { int x; char c; } __Pyx_pad_int;
|
|
typedef struct { long x; char c; } __Pyx_pad_long;
|
|
typedef struct { float x; char c; } __Pyx_pad_float;
|
|
typedef struct { double x; char c; } __Pyx_pad_double;
|
|
typedef struct { long double x; char c; } __Pyx_pad_longdouble;
|
|
typedef struct { void *x; char c; } __Pyx_pad_void_p;
|
|
#ifdef HAVE_LONG_LONG
|
|
typedef struct { PY_LONG_LONG x; char c; } __Pyx_pad_longlong;
|
|
#endif
|
|
static size_t __Pyx_BufFmt_TypeCharToPadding(char ch, CYTHON_UNUSED int is_complex) {
|
|
switch (ch) {
|
|
case '?': case 'c': case 'b': case 'B': case 's': case 'p': return 1;
|
|
case 'h': case 'H': return sizeof(__Pyx_pad_short) - sizeof(short);
|
|
case 'i': case 'I': return sizeof(__Pyx_pad_int) - sizeof(int);
|
|
case 'l': case 'L': return sizeof(__Pyx_pad_long) - sizeof(long);
|
|
#ifdef HAVE_LONG_LONG
|
|
case 'q': case 'Q': return sizeof(__Pyx_pad_longlong) - sizeof(PY_LONG_LONG);
|
|
#endif
|
|
case 'f': return sizeof(__Pyx_pad_float) - sizeof(float);
|
|
case 'd': return sizeof(__Pyx_pad_double) - sizeof(double);
|
|
case 'g': return sizeof(__Pyx_pad_longdouble) - sizeof(long double);
|
|
case 'P': case 'O': return sizeof(__Pyx_pad_void_p) - sizeof(void*);
|
|
default:
|
|
__Pyx_BufFmt_RaiseUnexpectedChar(ch);
|
|
return 0;
|
|
}
|
|
}
|
|
static char __Pyx_BufFmt_TypeCharToGroup(char ch, int is_complex) {
|
|
switch (ch) {
|
|
case 'c':
|
|
return 'H';
|
|
case 'b': case 'h': case 'i':
|
|
case 'l': case 'q': case 's': case 'p':
|
|
return 'I';
|
|
case 'B': case 'H': case 'I': case 'L': case 'Q':
|
|
return 'U';
|
|
case 'f': case 'd': case 'g':
|
|
return (is_complex ? 'C' : 'R');
|
|
case 'O':
|
|
return 'O';
|
|
case 'P':
|
|
return 'P';
|
|
default: {
|
|
__Pyx_BufFmt_RaiseUnexpectedChar(ch);
|
|
return 0;
|
|
}
|
|
}
|
|
}
|
|
static void __Pyx_BufFmt_RaiseExpected(__Pyx_BufFmt_Context* ctx) {
|
|
if (ctx->head == NULL || ctx->head->field == &ctx->root) {
|
|
const char* expected;
|
|
const char* quote;
|
|
if (ctx->head == NULL) {
|
|
expected = "end";
|
|
quote = "";
|
|
} else {
|
|
expected = ctx->head->field->type->name;
|
|
quote = "'";
|
|
}
|
|
PyErr_Format(PyExc_ValueError,
|
|
"Buffer dtype mismatch, expected %s%s%s but got %s",
|
|
quote, expected, quote,
|
|
__Pyx_BufFmt_DescribeTypeChar(ctx->enc_type, ctx->is_complex));
|
|
} else {
|
|
__Pyx_StructField* field = ctx->head->field;
|
|
__Pyx_StructField* parent = (ctx->head - 1)->field;
|
|
PyErr_Format(PyExc_ValueError,
|
|
"Buffer dtype mismatch, expected '%s' but got %s in '%s.%s'",
|
|
field->type->name, __Pyx_BufFmt_DescribeTypeChar(ctx->enc_type, ctx->is_complex),
|
|
parent->type->name, field->name);
|
|
}
|
|
}
|
|
static int __Pyx_BufFmt_ProcessTypeChunk(__Pyx_BufFmt_Context* ctx) {
|
|
char group;
|
|
size_t size, offset, arraysize = 1;
|
|
if (ctx->enc_type == 0) return 0;
|
|
if (ctx->head->field->type->arraysize[0]) {
|
|
int i, ndim = 0;
|
|
if (ctx->enc_type == 's' || ctx->enc_type == 'p') {
|
|
ctx->is_valid_array = ctx->head->field->type->ndim == 1;
|
|
ndim = 1;
|
|
if (ctx->enc_count != ctx->head->field->type->arraysize[0]) {
|
|
PyErr_Format(PyExc_ValueError,
|
|
"Expected a dimension of size %zu, got %zu",
|
|
ctx->head->field->type->arraysize[0], ctx->enc_count);
|
|
return -1;
|
|
}
|
|
}
|
|
if (!ctx->is_valid_array) {
|
|
PyErr_Format(PyExc_ValueError, "Expected %d dimensions, got %d",
|
|
ctx->head->field->type->ndim, ndim);
|
|
return -1;
|
|
}
|
|
for (i = 0; i < ctx->head->field->type->ndim; i++) {
|
|
arraysize *= ctx->head->field->type->arraysize[i];
|
|
}
|
|
ctx->is_valid_array = 0;
|
|
ctx->enc_count = 1;
|
|
}
|
|
group = __Pyx_BufFmt_TypeCharToGroup(ctx->enc_type, ctx->is_complex);
|
|
do {
|
|
__Pyx_StructField* field = ctx->head->field;
|
|
__Pyx_TypeInfo* type = field->type;
|
|
if (ctx->enc_packmode == '@' || ctx->enc_packmode == '^') {
|
|
size = __Pyx_BufFmt_TypeCharToNativeSize(ctx->enc_type, ctx->is_complex);
|
|
} else {
|
|
size = __Pyx_BufFmt_TypeCharToStandardSize(ctx->enc_type, ctx->is_complex);
|
|
}
|
|
if (ctx->enc_packmode == '@') {
|
|
size_t align_at = __Pyx_BufFmt_TypeCharToAlignment(ctx->enc_type, ctx->is_complex);
|
|
size_t align_mod_offset;
|
|
if (align_at == 0) return -1;
|
|
align_mod_offset = ctx->fmt_offset % align_at;
|
|
if (align_mod_offset > 0) ctx->fmt_offset += align_at - align_mod_offset;
|
|
if (ctx->struct_alignment == 0)
|
|
ctx->struct_alignment = __Pyx_BufFmt_TypeCharToPadding(ctx->enc_type,
|
|
ctx->is_complex);
|
|
}
|
|
if (type->size != size || type->typegroup != group) {
|
|
if (type->typegroup == 'C' && type->fields != NULL) {
|
|
size_t parent_offset = ctx->head->parent_offset + field->offset;
|
|
++ctx->head;
|
|
ctx->head->field = type->fields;
|
|
ctx->head->parent_offset = parent_offset;
|
|
continue;
|
|
}
|
|
if ((type->typegroup == 'H' || group == 'H') && type->size == size) {
|
|
} else {
|
|
__Pyx_BufFmt_RaiseExpected(ctx);
|
|
return -1;
|
|
}
|
|
}
|
|
offset = ctx->head->parent_offset + field->offset;
|
|
if (ctx->fmt_offset != offset) {
|
|
PyErr_Format(PyExc_ValueError,
|
|
"Buffer dtype mismatch; next field is at offset %" CYTHON_FORMAT_SSIZE_T "d but %" CYTHON_FORMAT_SSIZE_T "d expected",
|
|
(Py_ssize_t)ctx->fmt_offset, (Py_ssize_t)offset);
|
|
return -1;
|
|
}
|
|
ctx->fmt_offset += size;
|
|
if (arraysize)
|
|
ctx->fmt_offset += (arraysize - 1) * size;
|
|
--ctx->enc_count; /* Consume from buffer string */
|
|
while (1) {
|
|
if (field == &ctx->root) {
|
|
ctx->head = NULL;
|
|
if (ctx->enc_count != 0) {
|
|
__Pyx_BufFmt_RaiseExpected(ctx);
|
|
return -1;
|
|
}
|
|
break; /* breaks both loops as ctx->enc_count == 0 */
|
|
}
|
|
ctx->head->field = ++field;
|
|
if (field->type == NULL) {
|
|
--ctx->head;
|
|
field = ctx->head->field;
|
|
continue;
|
|
} else if (field->type->typegroup == 'S') {
|
|
size_t parent_offset = ctx->head->parent_offset + field->offset;
|
|
if (field->type->fields->type == NULL) continue; /* empty struct */
|
|
field = field->type->fields;
|
|
++ctx->head;
|
|
ctx->head->field = field;
|
|
ctx->head->parent_offset = parent_offset;
|
|
break;
|
|
} else {
|
|
break;
|
|
}
|
|
}
|
|
} while (ctx->enc_count);
|
|
ctx->enc_type = 0;
|
|
ctx->is_complex = 0;
|
|
return 0;
|
|
}
|
|
static CYTHON_INLINE PyObject *
|
|
__pyx_buffmt_parse_array(__Pyx_BufFmt_Context* ctx, const char** tsp)
|
|
{
|
|
const char *ts = *tsp;
|
|
int i = 0, number;
|
|
int ndim = ctx->head->field->type->ndim;
|
|
;
|
|
++ts;
|
|
if (ctx->new_count != 1) {
|
|
PyErr_SetString(PyExc_ValueError,
|
|
"Cannot handle repeated arrays in format string");
|
|
return NULL;
|
|
}
|
|
if (__Pyx_BufFmt_ProcessTypeChunk(ctx) == -1) return NULL;
|
|
while (*ts && *ts != ')') {
|
|
switch (*ts) {
|
|
case ' ': case '\f': case '\r': case '\n': case '\t': case '\v': continue;
|
|
default: break; /* not a 'break' in the loop */
|
|
}
|
|
number = __Pyx_BufFmt_ExpectNumber(&ts);
|
|
if (number == -1) return NULL;
|
|
if (i < ndim && (size_t) number != ctx->head->field->type->arraysize[i])
|
|
return PyErr_Format(PyExc_ValueError,
|
|
"Expected a dimension of size %zu, got %d",
|
|
ctx->head->field->type->arraysize[i], number);
|
|
if (*ts != ',' && *ts != ')')
|
|
return PyErr_Format(PyExc_ValueError,
|
|
"Expected a comma in format string, got '%c'", *ts);
|
|
if (*ts == ',') ts++;
|
|
i++;
|
|
}
|
|
if (i != ndim)
|
|
return PyErr_Format(PyExc_ValueError, "Expected %d dimension(s), got %d",
|
|
ctx->head->field->type->ndim, i);
|
|
if (!*ts) {
|
|
PyErr_SetString(PyExc_ValueError,
|
|
"Unexpected end of format string, expected ')'");
|
|
return NULL;
|
|
}
|
|
ctx->is_valid_array = 1;
|
|
ctx->new_count = 1;
|
|
*tsp = ++ts;
|
|
return Py_None;
|
|
}
|
|
static const char* __Pyx_BufFmt_CheckString(__Pyx_BufFmt_Context* ctx, const char* ts) {
|
|
int got_Z = 0;
|
|
while (1) {
|
|
switch(*ts) {
|
|
case 0:
|
|
if (ctx->enc_type != 0 && ctx->head == NULL) {
|
|
__Pyx_BufFmt_RaiseExpected(ctx);
|
|
return NULL;
|
|
}
|
|
if (__Pyx_BufFmt_ProcessTypeChunk(ctx) == -1) return NULL;
|
|
if (ctx->head != NULL) {
|
|
__Pyx_BufFmt_RaiseExpected(ctx);
|
|
return NULL;
|
|
}
|
|
return ts;
|
|
case ' ':
|
|
case 10:
|
|
case 13:
|
|
++ts;
|
|
break;
|
|
case '<':
|
|
if (!__Pyx_IsLittleEndian()) {
|
|
PyErr_SetString(PyExc_ValueError, "Little-endian buffer not supported on big-endian compiler");
|
|
return NULL;
|
|
}
|
|
ctx->new_packmode = '=';
|
|
++ts;
|
|
break;
|
|
case '>':
|
|
case '!':
|
|
if (__Pyx_IsLittleEndian()) {
|
|
PyErr_SetString(PyExc_ValueError, "Big-endian buffer not supported on little-endian compiler");
|
|
return NULL;
|
|
}
|
|
ctx->new_packmode = '=';
|
|
++ts;
|
|
break;
|
|
case '=':
|
|
case '@':
|
|
case '^':
|
|
ctx->new_packmode = *ts++;
|
|
break;
|
|
case 'T': /* substruct */
|
|
{
|
|
const char* ts_after_sub;
|
|
size_t i, struct_count = ctx->new_count;
|
|
size_t struct_alignment = ctx->struct_alignment;
|
|
ctx->new_count = 1;
|
|
++ts;
|
|
if (*ts != '{') {
|
|
PyErr_SetString(PyExc_ValueError, "Buffer acquisition: Expected '{' after 'T'");
|
|
return NULL;
|
|
}
|
|
if (__Pyx_BufFmt_ProcessTypeChunk(ctx) == -1) return NULL;
|
|
ctx->enc_type = 0; /* Erase processed last struct element */
|
|
ctx->enc_count = 0;
|
|
ctx->struct_alignment = 0;
|
|
++ts;
|
|
ts_after_sub = ts;
|
|
for (i = 0; i != struct_count; ++i) {
|
|
ts_after_sub = __Pyx_BufFmt_CheckString(ctx, ts);
|
|
if (!ts_after_sub) return NULL;
|
|
}
|
|
ts = ts_after_sub;
|
|
if (struct_alignment) ctx->struct_alignment = struct_alignment;
|
|
}
|
|
break;
|
|
case '}': /* end of substruct; either repeat or move on */
|
|
{
|
|
size_t alignment = ctx->struct_alignment;
|
|
++ts;
|
|
if (__Pyx_BufFmt_ProcessTypeChunk(ctx) == -1) return NULL;
|
|
ctx->enc_type = 0; /* Erase processed last struct element */
|
|
if (alignment && ctx->fmt_offset % alignment) {
|
|
ctx->fmt_offset += alignment - (ctx->fmt_offset % alignment);
|
|
}
|
|
}
|
|
return ts;
|
|
case 'x':
|
|
if (__Pyx_BufFmt_ProcessTypeChunk(ctx) == -1) return NULL;
|
|
ctx->fmt_offset += ctx->new_count;
|
|
ctx->new_count = 1;
|
|
ctx->enc_count = 0;
|
|
ctx->enc_type = 0;
|
|
ctx->enc_packmode = ctx->new_packmode;
|
|
++ts;
|
|
break;
|
|
case 'Z':
|
|
got_Z = 1;
|
|
++ts;
|
|
if (*ts != 'f' && *ts != 'd' && *ts != 'g') {
|
|
__Pyx_BufFmt_RaiseUnexpectedChar('Z');
|
|
return NULL;
|
|
} /* fall through */
|
|
case 'c': case 'b': case 'B': case 'h': case 'H': case 'i': case 'I':
|
|
case 'l': case 'L': case 'q': case 'Q':
|
|
case 'f': case 'd': case 'g':
|
|
case 'O': case 's': case 'p':
|
|
if (ctx->enc_type == *ts && got_Z == ctx->is_complex &&
|
|
ctx->enc_packmode == ctx->new_packmode) {
|
|
ctx->enc_count += ctx->new_count;
|
|
} else {
|
|
if (__Pyx_BufFmt_ProcessTypeChunk(ctx) == -1) return NULL;
|
|
ctx->enc_count = ctx->new_count;
|
|
ctx->enc_packmode = ctx->new_packmode;
|
|
ctx->enc_type = *ts;
|
|
ctx->is_complex = got_Z;
|
|
}
|
|
++ts;
|
|
ctx->new_count = 1;
|
|
got_Z = 0;
|
|
break;
|
|
case ':':
|
|
++ts;
|
|
while(*ts != ':') ++ts;
|
|
++ts;
|
|
break;
|
|
case '(':
|
|
if (!__pyx_buffmt_parse_array(ctx, &ts)) return NULL;
|
|
break;
|
|
default:
|
|
{
|
|
int number = __Pyx_BufFmt_ExpectNumber(&ts);
|
|
if (number == -1) return NULL;
|
|
ctx->new_count = (size_t)number;
|
|
}
|
|
}
|
|
}
|
|
}
|
|
static CYTHON_INLINE void __Pyx_ZeroBuffer(Py_buffer* buf) {
|
|
buf->buf = NULL;
|
|
buf->obj = NULL;
|
|
buf->strides = __Pyx_zeros;
|
|
buf->shape = __Pyx_zeros;
|
|
buf->suboffsets = __Pyx_minusones;
|
|
}
|
|
static CYTHON_INLINE int __Pyx_GetBufferAndValidate(
|
|
Py_buffer* buf, PyObject* obj, __Pyx_TypeInfo* dtype, int flags,
|
|
int nd, int cast, __Pyx_BufFmt_StackElem* stack)
|
|
{
|
|
if (obj == Py_None || obj == NULL) {
|
|
__Pyx_ZeroBuffer(buf);
|
|
return 0;
|
|
}
|
|
buf->buf = NULL;
|
|
if (__Pyx_GetBuffer(obj, buf, flags) == -1) goto fail;
|
|
if (buf->ndim != nd) {
|
|
PyErr_Format(PyExc_ValueError,
|
|
"Buffer has wrong number of dimensions (expected %d, got %d)",
|
|
nd, buf->ndim);
|
|
goto fail;
|
|
}
|
|
if (!cast) {
|
|
__Pyx_BufFmt_Context ctx;
|
|
__Pyx_BufFmt_Init(&ctx, stack, dtype);
|
|
if (!__Pyx_BufFmt_CheckString(&ctx, buf->format)) goto fail;
|
|
}
|
|
if ((unsigned)buf->itemsize != dtype->size) {
|
|
PyErr_Format(PyExc_ValueError,
|
|
"Item size of buffer (%" CYTHON_FORMAT_SSIZE_T "d byte%s) does not match size of '%s' (%" CYTHON_FORMAT_SSIZE_T "d byte%s)",
|
|
buf->itemsize, (buf->itemsize > 1) ? "s" : "",
|
|
dtype->name, (Py_ssize_t)dtype->size, (dtype->size > 1) ? "s" : "");
|
|
goto fail;
|
|
}
|
|
if (buf->suboffsets == NULL) buf->suboffsets = __Pyx_minusones;
|
|
return 0;
|
|
fail:;
|
|
__Pyx_ZeroBuffer(buf);
|
|
return -1;
|
|
}
|
|
static CYTHON_INLINE void __Pyx_SafeReleaseBuffer(Py_buffer* info) {
|
|
if (info->buf == NULL) return;
|
|
if (info->suboffsets == __Pyx_minusones) info->suboffsets = NULL;
|
|
__Pyx_ReleaseBuffer(info);
|
|
}
|
|
|
|
static CYTHON_INLINE PyObject *__Pyx_GetModuleGlobalName(PyObject *name) {
|
|
PyObject *result;
|
|
#if CYTHON_COMPILING_IN_CPYTHON
|
|
result = PyDict_GetItem(__pyx_d, name);
|
|
if (result) {
|
|
Py_INCREF(result);
|
|
} else {
|
|
#else
|
|
result = PyObject_GetItem(__pyx_d, name);
|
|
if (!result) {
|
|
PyErr_Clear();
|
|
#endif
|
|
result = __Pyx_GetBuiltinName(name);
|
|
}
|
|
return result;
|
|
}
|
|
|
|
#if CYTHON_COMPILING_IN_CPYTHON
|
|
static CYTHON_INLINE PyObject* __Pyx_PyObject_Call(PyObject *func, PyObject *arg, PyObject *kw) {
|
|
PyObject *result;
|
|
ternaryfunc call = func->ob_type->tp_call;
|
|
if (unlikely(!call))
|
|
return PyObject_Call(func, arg, kw);
|
|
#if PY_VERSION_HEX >= 0x02060000
|
|
if (unlikely(Py_EnterRecursiveCall((char*)" while calling a Python object")))
|
|
return NULL;
|
|
#endif
|
|
result = (*call)(func, arg, kw);
|
|
#if PY_VERSION_HEX >= 0x02060000
|
|
Py_LeaveRecursiveCall();
|
|
#endif
|
|
if (unlikely(!result) && unlikely(!PyErr_Occurred())) {
|
|
PyErr_SetString(
|
|
PyExc_SystemError,
|
|
"NULL result without error in PyObject_Call");
|
|
}
|
|
return result;
|
|
}
|
|
#endif
|
|
|
|
static CYTHON_INLINE int __Pyx_TypeTest(PyObject *obj, PyTypeObject *type) {
|
|
if (unlikely(!type)) {
|
|
PyErr_SetString(PyExc_SystemError, "Missing type object");
|
|
return 0;
|
|
}
|
|
if (likely(PyObject_TypeCheck(obj, type)))
|
|
return 1;
|
|
PyErr_Format(PyExc_TypeError, "Cannot convert %.200s to %.200s",
|
|
Py_TYPE(obj)->tp_name, type->tp_name);
|
|
return 0;
|
|
}
|
|
|
|
static void __Pyx_RaiseBufferFallbackError(void) {
|
|
PyErr_SetString(PyExc_ValueError,
|
|
"Buffer acquisition failed on assignment; and then reacquiring the old buffer failed too!");
|
|
}
|
|
|
|
static CYTHON_INLINE void __Pyx_ErrRestore(PyObject *type, PyObject *value, PyObject *tb) {
|
|
#if CYTHON_COMPILING_IN_CPYTHON
|
|
PyObject *tmp_type, *tmp_value, *tmp_tb;
|
|
PyThreadState *tstate = PyThreadState_GET();
|
|
tmp_type = tstate->curexc_type;
|
|
tmp_value = tstate->curexc_value;
|
|
tmp_tb = tstate->curexc_traceback;
|
|
tstate->curexc_type = type;
|
|
tstate->curexc_value = value;
|
|
tstate->curexc_traceback = tb;
|
|
Py_XDECREF(tmp_type);
|
|
Py_XDECREF(tmp_value);
|
|
Py_XDECREF(tmp_tb);
|
|
#else
|
|
PyErr_Restore(type, value, tb);
|
|
#endif
|
|
}
|
|
static CYTHON_INLINE void __Pyx_ErrFetch(PyObject **type, PyObject **value, PyObject **tb) {
|
|
#if CYTHON_COMPILING_IN_CPYTHON
|
|
PyThreadState *tstate = PyThreadState_GET();
|
|
*type = tstate->curexc_type;
|
|
*value = tstate->curexc_value;
|
|
*tb = tstate->curexc_traceback;
|
|
tstate->curexc_type = 0;
|
|
tstate->curexc_value = 0;
|
|
tstate->curexc_traceback = 0;
|
|
#else
|
|
PyErr_Fetch(type, value, tb);
|
|
#endif
|
|
}
|
|
|
|
#if PY_MAJOR_VERSION < 3
|
|
static void __Pyx_Raise(PyObject *type, PyObject *value, PyObject *tb,
|
|
CYTHON_UNUSED PyObject *cause) {
|
|
Py_XINCREF(type);
|
|
if (!value || value == Py_None)
|
|
value = NULL;
|
|
else
|
|
Py_INCREF(value);
|
|
if (!tb || tb == Py_None)
|
|
tb = NULL;
|
|
else {
|
|
Py_INCREF(tb);
|
|
if (!PyTraceBack_Check(tb)) {
|
|
PyErr_SetString(PyExc_TypeError,
|
|
"raise: arg 3 must be a traceback or None");
|
|
goto raise_error;
|
|
}
|
|
}
|
|
#if PY_VERSION_HEX < 0x02050000
|
|
if (PyClass_Check(type)) {
|
|
#else
|
|
if (PyType_Check(type)) {
|
|
#endif
|
|
#if CYTHON_COMPILING_IN_PYPY
|
|
if (!value) {
|
|
Py_INCREF(Py_None);
|
|
value = Py_None;
|
|
}
|
|
#endif
|
|
PyErr_NormalizeException(&type, &value, &tb);
|
|
} else {
|
|
if (value) {
|
|
PyErr_SetString(PyExc_TypeError,
|
|
"instance exception may not have a separate value");
|
|
goto raise_error;
|
|
}
|
|
value = type;
|
|
#if PY_VERSION_HEX < 0x02050000
|
|
if (PyInstance_Check(type)) {
|
|
type = (PyObject*) ((PyInstanceObject*)type)->in_class;
|
|
Py_INCREF(type);
|
|
} else {
|
|
type = 0;
|
|
PyErr_SetString(PyExc_TypeError,
|
|
"raise: exception must be an old-style class or instance");
|
|
goto raise_error;
|
|
}
|
|
#else
|
|
type = (PyObject*) Py_TYPE(type);
|
|
Py_INCREF(type);
|
|
if (!PyType_IsSubtype((PyTypeObject *)type, (PyTypeObject *)PyExc_BaseException)) {
|
|
PyErr_SetString(PyExc_TypeError,
|
|
"raise: exception class must be a subclass of BaseException");
|
|
goto raise_error;
|
|
}
|
|
#endif
|
|
}
|
|
__Pyx_ErrRestore(type, value, tb);
|
|
return;
|
|
raise_error:
|
|
Py_XDECREF(value);
|
|
Py_XDECREF(type);
|
|
Py_XDECREF(tb);
|
|
return;
|
|
}
|
|
#else /* Python 3+ */
|
|
static void __Pyx_Raise(PyObject *type, PyObject *value, PyObject *tb, PyObject *cause) {
|
|
PyObject* owned_instance = NULL;
|
|
if (tb == Py_None) {
|
|
tb = 0;
|
|
} else if (tb && !PyTraceBack_Check(tb)) {
|
|
PyErr_SetString(PyExc_TypeError,
|
|
"raise: arg 3 must be a traceback or None");
|
|
goto bad;
|
|
}
|
|
if (value == Py_None)
|
|
value = 0;
|
|
if (PyExceptionInstance_Check(type)) {
|
|
if (value) {
|
|
PyErr_SetString(PyExc_TypeError,
|
|
"instance exception may not have a separate value");
|
|
goto bad;
|
|
}
|
|
value = type;
|
|
type = (PyObject*) Py_TYPE(value);
|
|
} else if (PyExceptionClass_Check(type)) {
|
|
PyObject *instance_class = NULL;
|
|
if (value && PyExceptionInstance_Check(value)) {
|
|
instance_class = (PyObject*) Py_TYPE(value);
|
|
if (instance_class != type) {
|
|
if (PyObject_IsSubclass(instance_class, type)) {
|
|
type = instance_class;
|
|
} else {
|
|
instance_class = NULL;
|
|
}
|
|
}
|
|
}
|
|
if (!instance_class) {
|
|
PyObject *args;
|
|
if (!value)
|
|
args = PyTuple_New(0);
|
|
else if (PyTuple_Check(value)) {
|
|
Py_INCREF(value);
|
|
args = value;
|
|
} else
|
|
args = PyTuple_Pack(1, value);
|
|
if (!args)
|
|
goto bad;
|
|
owned_instance = PyObject_Call(type, args, NULL);
|
|
Py_DECREF(args);
|
|
if (!owned_instance)
|
|
goto bad;
|
|
value = owned_instance;
|
|
if (!PyExceptionInstance_Check(value)) {
|
|
PyErr_Format(PyExc_TypeError,
|
|
"calling %R should have returned an instance of "
|
|
"BaseException, not %R",
|
|
type, Py_TYPE(value));
|
|
goto bad;
|
|
}
|
|
}
|
|
} else {
|
|
PyErr_SetString(PyExc_TypeError,
|
|
"raise: exception class must be a subclass of BaseException");
|
|
goto bad;
|
|
}
|
|
#if PY_VERSION_HEX >= 0x03030000
|
|
if (cause) {
|
|
#else
|
|
if (cause && cause != Py_None) {
|
|
#endif
|
|
PyObject *fixed_cause;
|
|
if (cause == Py_None) {
|
|
fixed_cause = NULL;
|
|
} else if (PyExceptionClass_Check(cause)) {
|
|
fixed_cause = PyObject_CallObject(cause, NULL);
|
|
if (fixed_cause == NULL)
|
|
goto bad;
|
|
} else if (PyExceptionInstance_Check(cause)) {
|
|
fixed_cause = cause;
|
|
Py_INCREF(fixed_cause);
|
|
} else {
|
|
PyErr_SetString(PyExc_TypeError,
|
|
"exception causes must derive from "
|
|
"BaseException");
|
|
goto bad;
|
|
}
|
|
PyException_SetCause(value, fixed_cause);
|
|
}
|
|
PyErr_SetObject(type, value);
|
|
if (tb) {
|
|
PyThreadState *tstate = PyThreadState_GET();
|
|
PyObject* tmp_tb = tstate->curexc_traceback;
|
|
if (tb != tmp_tb) {
|
|
Py_INCREF(tb);
|
|
tstate->curexc_traceback = tb;
|
|
Py_XDECREF(tmp_tb);
|
|
}
|
|
}
|
|
bad:
|
|
Py_XDECREF(owned_instance);
|
|
return;
|
|
}
|
|
#endif
|
|
|
|
static CYTHON_INLINE PyObject* __Pyx_decode_c_string(
|
|
const char* cstring, Py_ssize_t start, Py_ssize_t stop,
|
|
const char* encoding, const char* errors,
|
|
PyObject* (*decode_func)(const char *s, Py_ssize_t size, const char *errors)) {
|
|
Py_ssize_t length;
|
|
if (unlikely((start < 0) | (stop < 0))) {
|
|
length = strlen(cstring);
|
|
if (start < 0) {
|
|
start += length;
|
|
if (start < 0)
|
|
start = 0;
|
|
}
|
|
if (stop < 0)
|
|
stop += length;
|
|
}
|
|
length = stop - start;
|
|
if (unlikely(length <= 0))
|
|
return PyUnicode_FromUnicode(NULL, 0);
|
|
cstring += start;
|
|
if (decode_func) {
|
|
return decode_func(cstring, length, errors);
|
|
} else {
|
|
return PyUnicode_Decode(cstring, length, encoding, errors);
|
|
}
|
|
}
|
|
|
|
static int __Pyx_GetException(PyObject **type, PyObject **value, PyObject **tb) {
|
|
PyObject *local_type, *local_value, *local_tb;
|
|
#if CYTHON_COMPILING_IN_CPYTHON
|
|
PyObject *tmp_type, *tmp_value, *tmp_tb;
|
|
PyThreadState *tstate = PyThreadState_GET();
|
|
local_type = tstate->curexc_type;
|
|
local_value = tstate->curexc_value;
|
|
local_tb = tstate->curexc_traceback;
|
|
tstate->curexc_type = 0;
|
|
tstate->curexc_value = 0;
|
|
tstate->curexc_traceback = 0;
|
|
#else
|
|
PyErr_Fetch(&local_type, &local_value, &local_tb);
|
|
#endif
|
|
PyErr_NormalizeException(&local_type, &local_value, &local_tb);
|
|
#if CYTHON_COMPILING_IN_CPYTHON
|
|
if (unlikely(tstate->curexc_type))
|
|
#else
|
|
if (unlikely(PyErr_Occurred()))
|
|
#endif
|
|
goto bad;
|
|
#if PY_MAJOR_VERSION >= 3
|
|
if (local_tb) {
|
|
if (unlikely(PyException_SetTraceback(local_value, local_tb) < 0))
|
|
goto bad;
|
|
}
|
|
#endif
|
|
Py_XINCREF(local_tb);
|
|
Py_XINCREF(local_type);
|
|
Py_XINCREF(local_value);
|
|
*type = local_type;
|
|
*value = local_value;
|
|
*tb = local_tb;
|
|
#if CYTHON_COMPILING_IN_CPYTHON
|
|
tmp_type = tstate->exc_type;
|
|
tmp_value = tstate->exc_value;
|
|
tmp_tb = tstate->exc_traceback;
|
|
tstate->exc_type = local_type;
|
|
tstate->exc_value = local_value;
|
|
tstate->exc_traceback = local_tb;
|
|
Py_XDECREF(tmp_type);
|
|
Py_XDECREF(tmp_value);
|
|
Py_XDECREF(tmp_tb);
|
|
#else
|
|
PyErr_SetExcInfo(local_type, local_value, local_tb);
|
|
#endif
|
|
return 0;
|
|
bad:
|
|
*type = 0;
|
|
*value = 0;
|
|
*tb = 0;
|
|
Py_XDECREF(local_type);
|
|
Py_XDECREF(local_value);
|
|
Py_XDECREF(local_tb);
|
|
return -1;
|
|
}
|
|
|
|
static CYTHON_INLINE void __Pyx_ExceptionSwap(PyObject **type, PyObject **value, PyObject **tb) {
|
|
PyObject *tmp_type, *tmp_value, *tmp_tb;
|
|
#if CYTHON_COMPILING_IN_CPYTHON
|
|
PyThreadState *tstate = PyThreadState_GET();
|
|
tmp_type = tstate->exc_type;
|
|
tmp_value = tstate->exc_value;
|
|
tmp_tb = tstate->exc_traceback;
|
|
tstate->exc_type = *type;
|
|
tstate->exc_value = *value;
|
|
tstate->exc_traceback = *tb;
|
|
#else
|
|
PyErr_GetExcInfo(&tmp_type, &tmp_value, &tmp_tb);
|
|
PyErr_SetExcInfo(*type, *value, *tb);
|
|
#endif
|
|
*type = tmp_type;
|
|
*value = tmp_value;
|
|
*tb = tmp_tb;
|
|
}
|
|
|
|
static CYTHON_INLINE void __Pyx_ExceptionSave(PyObject **type, PyObject **value, PyObject **tb) {
|
|
#if CYTHON_COMPILING_IN_CPYTHON
|
|
PyThreadState *tstate = PyThreadState_GET();
|
|
*type = tstate->exc_type;
|
|
*value = tstate->exc_value;
|
|
*tb = tstate->exc_traceback;
|
|
Py_XINCREF(*type);
|
|
Py_XINCREF(*value);
|
|
Py_XINCREF(*tb);
|
|
#else
|
|
PyErr_GetExcInfo(type, value, tb);
|
|
#endif
|
|
}
|
|
static void __Pyx_ExceptionReset(PyObject *type, PyObject *value, PyObject *tb) {
|
|
#if CYTHON_COMPILING_IN_CPYTHON
|
|
PyObject *tmp_type, *tmp_value, *tmp_tb;
|
|
PyThreadState *tstate = PyThreadState_GET();
|
|
tmp_type = tstate->exc_type;
|
|
tmp_value = tstate->exc_value;
|
|
tmp_tb = tstate->exc_traceback;
|
|
tstate->exc_type = type;
|
|
tstate->exc_value = value;
|
|
tstate->exc_traceback = tb;
|
|
Py_XDECREF(tmp_type);
|
|
Py_XDECREF(tmp_value);
|
|
Py_XDECREF(tmp_tb);
|
|
#else
|
|
PyErr_SetExcInfo(type, value, tb);
|
|
#endif
|
|
}
|
|
|
|
static CYTHON_INLINE long __Pyx_div_long(long a, long b) {
|
|
long q = a / b;
|
|
long r = a - q*b;
|
|
q -= ((r != 0) & ((r ^ b) < 0));
|
|
return q;
|
|
}
|
|
|
|
static CYTHON_INLINE void __Pyx_RaiseTooManyValuesError(Py_ssize_t expected) {
|
|
PyErr_Format(PyExc_ValueError,
|
|
"too many values to unpack (expected %" CYTHON_FORMAT_SSIZE_T "d)", expected);
|
|
}
|
|
|
|
static CYTHON_INLINE void __Pyx_RaiseNeedMoreValuesError(Py_ssize_t index) {
|
|
PyErr_Format(PyExc_ValueError,
|
|
"need more than %" CYTHON_FORMAT_SSIZE_T "d value%.1s to unpack",
|
|
index, (index == 1) ? "" : "s");
|
|
}
|
|
|
|
static CYTHON_INLINE void __Pyx_RaiseNoneNotIterableError(void) {
|
|
PyErr_SetString(PyExc_TypeError, "'NoneType' object is not iterable");
|
|
}
|
|
|
|
#if PY_MAJOR_VERSION < 3
|
|
static int __Pyx_GetBuffer(PyObject *obj, Py_buffer *view, int flags) {
|
|
#if PY_VERSION_HEX >= 0x02060000
|
|
if (PyObject_CheckBuffer(obj)) return PyObject_GetBuffer(obj, view, flags);
|
|
#endif
|
|
if (PyObject_TypeCheck(obj, __pyx_ptype_5numpy_ndarray)) return __pyx_pw_5numpy_7ndarray_1__getbuffer__(obj, view, flags);
|
|
#if PY_VERSION_HEX < 0x02060000
|
|
if (obj->ob_type->tp_dict) {
|
|
PyObject *getbuffer_cobj = PyObject_GetItem(
|
|
obj->ob_type->tp_dict, __pyx_n_s_pyx_getbuffer);
|
|
if (getbuffer_cobj) {
|
|
getbufferproc func = (getbufferproc) PyCObject_AsVoidPtr(getbuffer_cobj);
|
|
Py_DECREF(getbuffer_cobj);
|
|
if (!func)
|
|
goto fail;
|
|
return func(obj, view, flags);
|
|
} else {
|
|
PyErr_Clear();
|
|
}
|
|
}
|
|
#endif
|
|
PyErr_Format(PyExc_TypeError, "'%.200s' does not have the buffer interface", Py_TYPE(obj)->tp_name);
|
|
#if PY_VERSION_HEX < 0x02060000
|
|
fail:
|
|
#endif
|
|
return -1;
|
|
}
|
|
static void __Pyx_ReleaseBuffer(Py_buffer *view) {
|
|
PyObject *obj = view->obj;
|
|
if (!obj) return;
|
|
#if PY_VERSION_HEX >= 0x02060000
|
|
if (PyObject_CheckBuffer(obj)) {
|
|
PyBuffer_Release(view);
|
|
return;
|
|
}
|
|
#endif
|
|
if (PyObject_TypeCheck(obj, __pyx_ptype_5numpy_ndarray)) { __pyx_pw_5numpy_7ndarray_3__releasebuffer__(obj, view); return; }
|
|
#if PY_VERSION_HEX < 0x02060000
|
|
if (obj->ob_type->tp_dict) {
|
|
PyObject *releasebuffer_cobj = PyObject_GetItem(
|
|
obj->ob_type->tp_dict, __pyx_n_s_pyx_releasebuffer);
|
|
if (releasebuffer_cobj) {
|
|
releasebufferproc func = (releasebufferproc) PyCObject_AsVoidPtr(releasebuffer_cobj);
|
|
Py_DECREF(releasebuffer_cobj);
|
|
if (!func)
|
|
goto fail;
|
|
func(obj, view);
|
|
return;
|
|
} else {
|
|
PyErr_Clear();
|
|
}
|
|
}
|
|
#endif
|
|
goto nofail;
|
|
#if PY_VERSION_HEX < 0x02060000
|
|
fail:
|
|
#endif
|
|
PyErr_WriteUnraisable(obj);
|
|
nofail:
|
|
Py_DECREF(obj);
|
|
view->obj = NULL;
|
|
}
|
|
#endif /* PY_MAJOR_VERSION < 3 */
|
|
|
|
|
|
static PyObject *__Pyx_Import(PyObject *name, PyObject *from_list, int level) {
|
|
PyObject *empty_list = 0;
|
|
PyObject *module = 0;
|
|
PyObject *global_dict = 0;
|
|
PyObject *empty_dict = 0;
|
|
PyObject *list;
|
|
#if PY_VERSION_HEX < 0x03030000
|
|
PyObject *py_import;
|
|
py_import = __Pyx_PyObject_GetAttrStr(__pyx_b, __pyx_n_s_import);
|
|
if (!py_import)
|
|
goto bad;
|
|
#endif
|
|
if (from_list)
|
|
list = from_list;
|
|
else {
|
|
empty_list = PyList_New(0);
|
|
if (!empty_list)
|
|
goto bad;
|
|
list = empty_list;
|
|
}
|
|
global_dict = PyModule_GetDict(__pyx_m);
|
|
if (!global_dict)
|
|
goto bad;
|
|
empty_dict = PyDict_New();
|
|
if (!empty_dict)
|
|
goto bad;
|
|
#if PY_VERSION_HEX >= 0x02050000
|
|
{
|
|
#if PY_MAJOR_VERSION >= 3
|
|
if (level == -1) {
|
|
if (strchr(__Pyx_MODULE_NAME, '.')) {
|
|
#if PY_VERSION_HEX < 0x03030000
|
|
PyObject *py_level = PyInt_FromLong(1);
|
|
if (!py_level)
|
|
goto bad;
|
|
module = PyObject_CallFunctionObjArgs(py_import,
|
|
name, global_dict, empty_dict, list, py_level, NULL);
|
|
Py_DECREF(py_level);
|
|
#else
|
|
module = PyImport_ImportModuleLevelObject(
|
|
name, global_dict, empty_dict, list, 1);
|
|
#endif
|
|
if (!module) {
|
|
if (!PyErr_ExceptionMatches(PyExc_ImportError))
|
|
goto bad;
|
|
PyErr_Clear();
|
|
}
|
|
}
|
|
level = 0; /* try absolute import on failure */
|
|
}
|
|
#endif
|
|
if (!module) {
|
|
#if PY_VERSION_HEX < 0x03030000
|
|
PyObject *py_level = PyInt_FromLong(level);
|
|
if (!py_level)
|
|
goto bad;
|
|
module = PyObject_CallFunctionObjArgs(py_import,
|
|
name, global_dict, empty_dict, list, py_level, NULL);
|
|
Py_DECREF(py_level);
|
|
#else
|
|
module = PyImport_ImportModuleLevelObject(
|
|
name, global_dict, empty_dict, list, level);
|
|
#endif
|
|
}
|
|
}
|
|
#else
|
|
if (level>0) {
|
|
PyErr_SetString(PyExc_RuntimeError, "Relative import is not supported for Python <=2.4.");
|
|
goto bad;
|
|
}
|
|
module = PyObject_CallFunctionObjArgs(py_import,
|
|
name, global_dict, empty_dict, list, NULL);
|
|
#endif
|
|
bad:
|
|
#if PY_VERSION_HEX < 0x03030000
|
|
Py_XDECREF(py_import);
|
|
#endif
|
|
Py_XDECREF(empty_list);
|
|
Py_XDECREF(empty_dict);
|
|
return module;
|
|
}
|
|
|
|
#define __PYX_VERIFY_RETURN_INT(target_type, func_type, func) \
|
|
{ \
|
|
func_type value = func(x); \
|
|
if (sizeof(target_type) < sizeof(func_type)) { \
|
|
if (unlikely(value != (func_type) (target_type) value)) { \
|
|
func_type zero = 0; \
|
|
PyErr_SetString(PyExc_OverflowError, \
|
|
(is_unsigned && unlikely(value < zero)) ? \
|
|
"can't convert negative value to " #target_type : \
|
|
"value too large to convert to " #target_type); \
|
|
return (target_type) -1; \
|
|
} \
|
|
} \
|
|
return (target_type) value; \
|
|
}
|
|
|
|
#if CYTHON_COMPILING_IN_CPYTHON && PY_MAJOR_VERSION >= 3
|
|
#if CYTHON_USE_PYLONG_INTERNALS
|
|
#include "longintrepr.h"
|
|
#endif
|
|
#endif
|
|
static CYTHON_INLINE int __Pyx_PyInt_As_int(PyObject *x) {
|
|
const int neg_one = (int) -1, const_zero = 0;
|
|
const int is_unsigned = neg_one > const_zero;
|
|
#if PY_MAJOR_VERSION < 3
|
|
if (likely(PyInt_Check(x))) {
|
|
if (sizeof(int) < sizeof(long)) {
|
|
__PYX_VERIFY_RETURN_INT(int, long, PyInt_AS_LONG)
|
|
} else {
|
|
long val = PyInt_AS_LONG(x);
|
|
if (is_unsigned && unlikely(val < 0)) {
|
|
PyErr_SetString(PyExc_OverflowError,
|
|
"can't convert negative value to int");
|
|
return (int) -1;
|
|
}
|
|
return (int) val;
|
|
}
|
|
} else
|
|
#endif
|
|
if (likely(PyLong_Check(x))) {
|
|
if (is_unsigned) {
|
|
#if CYTHON_COMPILING_IN_CPYTHON && PY_MAJOR_VERSION >= 3
|
|
#if CYTHON_USE_PYLONG_INTERNALS
|
|
if (sizeof(digit) <= sizeof(int)) {
|
|
switch (Py_SIZE(x)) {
|
|
case 0: return 0;
|
|
case 1: return (int) ((PyLongObject*)x)->ob_digit[0];
|
|
}
|
|
}
|
|
#endif
|
|
#endif
|
|
if (unlikely(Py_SIZE(x) < 0)) {
|
|
PyErr_SetString(PyExc_OverflowError,
|
|
"can't convert negative value to int");
|
|
return (int) -1;
|
|
}
|
|
if (sizeof(int) <= sizeof(unsigned long)) {
|
|
__PYX_VERIFY_RETURN_INT(int, unsigned long, PyLong_AsUnsignedLong)
|
|
} else if (sizeof(int) <= sizeof(unsigned long long)) {
|
|
__PYX_VERIFY_RETURN_INT(int, unsigned long long, PyLong_AsUnsignedLongLong)
|
|
}
|
|
} else {
|
|
#if CYTHON_COMPILING_IN_CPYTHON && PY_MAJOR_VERSION >= 3
|
|
#if CYTHON_USE_PYLONG_INTERNALS
|
|
if (sizeof(digit) <= sizeof(int)) {
|
|
switch (Py_SIZE(x)) {
|
|
case 0: return 0;
|
|
case 1: return +(int) ((PyLongObject*)x)->ob_digit[0];
|
|
case -1: return -(int) ((PyLongObject*)x)->ob_digit[0];
|
|
}
|
|
}
|
|
#endif
|
|
#endif
|
|
if (sizeof(int) <= sizeof(long)) {
|
|
__PYX_VERIFY_RETURN_INT(int, long, PyLong_AsLong)
|
|
} else if (sizeof(int) <= sizeof(long long)) {
|
|
__PYX_VERIFY_RETURN_INT(int, long long, PyLong_AsLongLong)
|
|
}
|
|
}
|
|
{
|
|
#if CYTHON_COMPILING_IN_PYPY && !defined(_PyLong_AsByteArray)
|
|
PyErr_SetString(PyExc_RuntimeError,
|
|
"_PyLong_AsByteArray() not available in PyPy, cannot convert large numbers");
|
|
#else
|
|
int val;
|
|
PyObject *v = __Pyx_PyNumber_Int(x);
|
|
#if PY_MAJOR_VERSION < 3
|
|
if (likely(v) && !PyLong_Check(v)) {
|
|
PyObject *tmp = v;
|
|
v = PyNumber_Long(tmp);
|
|
Py_DECREF(tmp);
|
|
}
|
|
#endif
|
|
if (likely(v)) {
|
|
int one = 1; int is_little = (int)*(unsigned char *)&one;
|
|
unsigned char *bytes = (unsigned char *)&val;
|
|
int ret = _PyLong_AsByteArray((PyLongObject *)v,
|
|
bytes, sizeof(val),
|
|
is_little, !is_unsigned);
|
|
Py_DECREF(v);
|
|
if (likely(!ret))
|
|
return val;
|
|
}
|
|
#endif
|
|
return (int) -1;
|
|
}
|
|
} else {
|
|
int val;
|
|
PyObject *tmp = __Pyx_PyNumber_Int(x);
|
|
if (!tmp) return (int) -1;
|
|
val = __Pyx_PyInt_As_int(tmp);
|
|
Py_DECREF(tmp);
|
|
return val;
|
|
}
|
|
}
|
|
|
|
static CYTHON_INLINE PyObject* __Pyx_PyInt_From_Py_intptr_t(Py_intptr_t value) {
|
|
const Py_intptr_t neg_one = (Py_intptr_t) -1, const_zero = 0;
|
|
const int is_unsigned = neg_one > const_zero;
|
|
if (is_unsigned) {
|
|
if (sizeof(Py_intptr_t) < sizeof(long)) {
|
|
return PyInt_FromLong((long) value);
|
|
} else if (sizeof(Py_intptr_t) <= sizeof(unsigned long)) {
|
|
return PyLong_FromUnsignedLong((unsigned long) value);
|
|
} else if (sizeof(Py_intptr_t) <= sizeof(unsigned long long)) {
|
|
return PyLong_FromUnsignedLongLong((unsigned long long) value);
|
|
}
|
|
} else {
|
|
if (sizeof(Py_intptr_t) <= sizeof(long)) {
|
|
return PyInt_FromLong((long) value);
|
|
} else if (sizeof(Py_intptr_t) <= sizeof(long long)) {
|
|
return PyLong_FromLongLong((long long) value);
|
|
}
|
|
}
|
|
{
|
|
int one = 1; int little = (int)*(unsigned char *)&one;
|
|
unsigned char *bytes = (unsigned char *)&value;
|
|
return _PyLong_FromByteArray(bytes, sizeof(Py_intptr_t),
|
|
little, !is_unsigned);
|
|
}
|
|
}
|
|
|
|
static CYTHON_INLINE PyObject* __Pyx_PyInt_From_int(int value) {
|
|
const int neg_one = (int) -1, const_zero = 0;
|
|
const int is_unsigned = neg_one > const_zero;
|
|
if (is_unsigned) {
|
|
if (sizeof(int) < sizeof(long)) {
|
|
return PyInt_FromLong((long) value);
|
|
} else if (sizeof(int) <= sizeof(unsigned long)) {
|
|
return PyLong_FromUnsignedLong((unsigned long) value);
|
|
} else if (sizeof(int) <= sizeof(unsigned long long)) {
|
|
return PyLong_FromUnsignedLongLong((unsigned long long) value);
|
|
}
|
|
} else {
|
|
if (sizeof(int) <= sizeof(long)) {
|
|
return PyInt_FromLong((long) value);
|
|
} else if (sizeof(int) <= sizeof(long long)) {
|
|
return PyLong_FromLongLong((long long) value);
|
|
}
|
|
}
|
|
{
|
|
int one = 1; int little = (int)*(unsigned char *)&one;
|
|
unsigned char *bytes = (unsigned char *)&value;
|
|
return _PyLong_FromByteArray(bytes, sizeof(int),
|
|
little, !is_unsigned);
|
|
}
|
|
}
|
|
|
|
#if CYTHON_CCOMPLEX
|
|
#ifdef __cplusplus
|
|
static CYTHON_INLINE __pyx_t_float_complex __pyx_t_float_complex_from_parts(float x, float y) {
|
|
return ::std::complex< float >(x, y);
|
|
}
|
|
#else
|
|
static CYTHON_INLINE __pyx_t_float_complex __pyx_t_float_complex_from_parts(float x, float y) {
|
|
return x + y*(__pyx_t_float_complex)_Complex_I;
|
|
}
|
|
#endif
|
|
#else
|
|
static CYTHON_INLINE __pyx_t_float_complex __pyx_t_float_complex_from_parts(float x, float y) {
|
|
__pyx_t_float_complex z;
|
|
z.real = x;
|
|
z.imag = y;
|
|
return z;
|
|
}
|
|
#endif
|
|
|
|
#if CYTHON_CCOMPLEX
|
|
#else
|
|
static CYTHON_INLINE int __Pyx_c_eqf(__pyx_t_float_complex a, __pyx_t_float_complex b) {
|
|
return (a.real == b.real) && (a.imag == b.imag);
|
|
}
|
|
static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_sumf(__pyx_t_float_complex a, __pyx_t_float_complex b) {
|
|
__pyx_t_float_complex z;
|
|
z.real = a.real + b.real;
|
|
z.imag = a.imag + b.imag;
|
|
return z;
|
|
}
|
|
static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_difff(__pyx_t_float_complex a, __pyx_t_float_complex b) {
|
|
__pyx_t_float_complex z;
|
|
z.real = a.real - b.real;
|
|
z.imag = a.imag - b.imag;
|
|
return z;
|
|
}
|
|
static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_prodf(__pyx_t_float_complex a, __pyx_t_float_complex b) {
|
|
__pyx_t_float_complex z;
|
|
z.real = a.real * b.real - a.imag * b.imag;
|
|
z.imag = a.real * b.imag + a.imag * b.real;
|
|
return z;
|
|
}
|
|
static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_quotf(__pyx_t_float_complex a, __pyx_t_float_complex b) {
|
|
__pyx_t_float_complex z;
|
|
float denom = b.real * b.real + b.imag * b.imag;
|
|
z.real = (a.real * b.real + a.imag * b.imag) / denom;
|
|
z.imag = (a.imag * b.real - a.real * b.imag) / denom;
|
|
return z;
|
|
}
|
|
static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_negf(__pyx_t_float_complex a) {
|
|
__pyx_t_float_complex z;
|
|
z.real = -a.real;
|
|
z.imag = -a.imag;
|
|
return z;
|
|
}
|
|
static CYTHON_INLINE int __Pyx_c_is_zerof(__pyx_t_float_complex a) {
|
|
return (a.real == 0) && (a.imag == 0);
|
|
}
|
|
static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_conjf(__pyx_t_float_complex a) {
|
|
__pyx_t_float_complex z;
|
|
z.real = a.real;
|
|
z.imag = -a.imag;
|
|
return z;
|
|
}
|
|
#if 1
|
|
static CYTHON_INLINE float __Pyx_c_absf(__pyx_t_float_complex z) {
|
|
#if !defined(HAVE_HYPOT) || defined(_MSC_VER)
|
|
return sqrtf(z.real*z.real + z.imag*z.imag);
|
|
#else
|
|
return hypotf(z.real, z.imag);
|
|
#endif
|
|
}
|
|
static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_powf(__pyx_t_float_complex a, __pyx_t_float_complex b) {
|
|
__pyx_t_float_complex z;
|
|
float r, lnr, theta, z_r, z_theta;
|
|
if (b.imag == 0 && b.real == (int)b.real) {
|
|
if (b.real < 0) {
|
|
float denom = a.real * a.real + a.imag * a.imag;
|
|
a.real = a.real / denom;
|
|
a.imag = -a.imag / denom;
|
|
b.real = -b.real;
|
|
}
|
|
switch ((int)b.real) {
|
|
case 0:
|
|
z.real = 1;
|
|
z.imag = 0;
|
|
return z;
|
|
case 1:
|
|
return a;
|
|
case 2:
|
|
z = __Pyx_c_prodf(a, a);
|
|
return __Pyx_c_prodf(a, a);
|
|
case 3:
|
|
z = __Pyx_c_prodf(a, a);
|
|
return __Pyx_c_prodf(z, a);
|
|
case 4:
|
|
z = __Pyx_c_prodf(a, a);
|
|
return __Pyx_c_prodf(z, z);
|
|
}
|
|
}
|
|
if (a.imag == 0) {
|
|
if (a.real == 0) {
|
|
return a;
|
|
}
|
|
r = a.real;
|
|
theta = 0;
|
|
} else {
|
|
r = __Pyx_c_absf(a);
|
|
theta = atan2f(a.imag, a.real);
|
|
}
|
|
lnr = logf(r);
|
|
z_r = expf(lnr * b.real - theta * b.imag);
|
|
z_theta = theta * b.real + lnr * b.imag;
|
|
z.real = z_r * cosf(z_theta);
|
|
z.imag = z_r * sinf(z_theta);
|
|
return z;
|
|
}
|
|
#endif
|
|
#endif
|
|
|
|
#if CYTHON_CCOMPLEX
|
|
#ifdef __cplusplus
|
|
static CYTHON_INLINE __pyx_t_double_complex __pyx_t_double_complex_from_parts(double x, double y) {
|
|
return ::std::complex< double >(x, y);
|
|
}
|
|
#else
|
|
static CYTHON_INLINE __pyx_t_double_complex __pyx_t_double_complex_from_parts(double x, double y) {
|
|
return x + y*(__pyx_t_double_complex)_Complex_I;
|
|
}
|
|
#endif
|
|
#else
|
|
static CYTHON_INLINE __pyx_t_double_complex __pyx_t_double_complex_from_parts(double x, double y) {
|
|
__pyx_t_double_complex z;
|
|
z.real = x;
|
|
z.imag = y;
|
|
return z;
|
|
}
|
|
#endif
|
|
|
|
#if CYTHON_CCOMPLEX
|
|
#else
|
|
static CYTHON_INLINE int __Pyx_c_eq(__pyx_t_double_complex a, __pyx_t_double_complex b) {
|
|
return (a.real == b.real) && (a.imag == b.imag);
|
|
}
|
|
static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_sum(__pyx_t_double_complex a, __pyx_t_double_complex b) {
|
|
__pyx_t_double_complex z;
|
|
z.real = a.real + b.real;
|
|
z.imag = a.imag + b.imag;
|
|
return z;
|
|
}
|
|
static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_diff(__pyx_t_double_complex a, __pyx_t_double_complex b) {
|
|
__pyx_t_double_complex z;
|
|
z.real = a.real - b.real;
|
|
z.imag = a.imag - b.imag;
|
|
return z;
|
|
}
|
|
static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_prod(__pyx_t_double_complex a, __pyx_t_double_complex b) {
|
|
__pyx_t_double_complex z;
|
|
z.real = a.real * b.real - a.imag * b.imag;
|
|
z.imag = a.real * b.imag + a.imag * b.real;
|
|
return z;
|
|
}
|
|
static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_quot(__pyx_t_double_complex a, __pyx_t_double_complex b) {
|
|
__pyx_t_double_complex z;
|
|
double denom = b.real * b.real + b.imag * b.imag;
|
|
z.real = (a.real * b.real + a.imag * b.imag) / denom;
|
|
z.imag = (a.imag * b.real - a.real * b.imag) / denom;
|
|
return z;
|
|
}
|
|
static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_neg(__pyx_t_double_complex a) {
|
|
__pyx_t_double_complex z;
|
|
z.real = -a.real;
|
|
z.imag = -a.imag;
|
|
return z;
|
|
}
|
|
static CYTHON_INLINE int __Pyx_c_is_zero(__pyx_t_double_complex a) {
|
|
return (a.real == 0) && (a.imag == 0);
|
|
}
|
|
static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_conj(__pyx_t_double_complex a) {
|
|
__pyx_t_double_complex z;
|
|
z.real = a.real;
|
|
z.imag = -a.imag;
|
|
return z;
|
|
}
|
|
#if 1
|
|
static CYTHON_INLINE double __Pyx_c_abs(__pyx_t_double_complex z) {
|
|
#if !defined(HAVE_HYPOT) || defined(_MSC_VER)
|
|
return sqrt(z.real*z.real + z.imag*z.imag);
|
|
#else
|
|
return hypot(z.real, z.imag);
|
|
#endif
|
|
}
|
|
static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_pow(__pyx_t_double_complex a, __pyx_t_double_complex b) {
|
|
__pyx_t_double_complex z;
|
|
double r, lnr, theta, z_r, z_theta;
|
|
if (b.imag == 0 && b.real == (int)b.real) {
|
|
if (b.real < 0) {
|
|
double denom = a.real * a.real + a.imag * a.imag;
|
|
a.real = a.real / denom;
|
|
a.imag = -a.imag / denom;
|
|
b.real = -b.real;
|
|
}
|
|
switch ((int)b.real) {
|
|
case 0:
|
|
z.real = 1;
|
|
z.imag = 0;
|
|
return z;
|
|
case 1:
|
|
return a;
|
|
case 2:
|
|
z = __Pyx_c_prod(a, a);
|
|
return __Pyx_c_prod(a, a);
|
|
case 3:
|
|
z = __Pyx_c_prod(a, a);
|
|
return __Pyx_c_prod(z, a);
|
|
case 4:
|
|
z = __Pyx_c_prod(a, a);
|
|
return __Pyx_c_prod(z, z);
|
|
}
|
|
}
|
|
if (a.imag == 0) {
|
|
if (a.real == 0) {
|
|
return a;
|
|
}
|
|
r = a.real;
|
|
theta = 0;
|
|
} else {
|
|
r = __Pyx_c_abs(a);
|
|
theta = atan2(a.imag, a.real);
|
|
}
|
|
lnr = log(r);
|
|
z_r = exp(lnr * b.real - theta * b.imag);
|
|
z_theta = theta * b.real + lnr * b.imag;
|
|
z.real = z_r * cos(z_theta);
|
|
z.imag = z_r * sin(z_theta);
|
|
return z;
|
|
}
|
|
#endif
|
|
#endif
|
|
|
|
static CYTHON_INLINE PyObject* __Pyx_PyInt_From_long(long value) {
|
|
const long neg_one = (long) -1, const_zero = 0;
|
|
const int is_unsigned = neg_one > const_zero;
|
|
if (is_unsigned) {
|
|
if (sizeof(long) < sizeof(long)) {
|
|
return PyInt_FromLong((long) value);
|
|
} else if (sizeof(long) <= sizeof(unsigned long)) {
|
|
return PyLong_FromUnsignedLong((unsigned long) value);
|
|
} else if (sizeof(long) <= sizeof(unsigned long long)) {
|
|
return PyLong_FromUnsignedLongLong((unsigned long long) value);
|
|
}
|
|
} else {
|
|
if (sizeof(long) <= sizeof(long)) {
|
|
return PyInt_FromLong((long) value);
|
|
} else if (sizeof(long) <= sizeof(long long)) {
|
|
return PyLong_FromLongLong((long long) value);
|
|
}
|
|
}
|
|
{
|
|
int one = 1; int little = (int)*(unsigned char *)&one;
|
|
unsigned char *bytes = (unsigned char *)&value;
|
|
return _PyLong_FromByteArray(bytes, sizeof(long),
|
|
little, !is_unsigned);
|
|
}
|
|
}
|
|
|
|
#if CYTHON_COMPILING_IN_CPYTHON && PY_MAJOR_VERSION >= 3
|
|
#if CYTHON_USE_PYLONG_INTERNALS
|
|
#include "longintrepr.h"
|
|
#endif
|
|
#endif
|
|
static CYTHON_INLINE long __Pyx_PyInt_As_long(PyObject *x) {
|
|
const long neg_one = (long) -1, const_zero = 0;
|
|
const int is_unsigned = neg_one > const_zero;
|
|
#if PY_MAJOR_VERSION < 3
|
|
if (likely(PyInt_Check(x))) {
|
|
if (sizeof(long) < sizeof(long)) {
|
|
__PYX_VERIFY_RETURN_INT(long, long, PyInt_AS_LONG)
|
|
} else {
|
|
long val = PyInt_AS_LONG(x);
|
|
if (is_unsigned && unlikely(val < 0)) {
|
|
PyErr_SetString(PyExc_OverflowError,
|
|
"can't convert negative value to long");
|
|
return (long) -1;
|
|
}
|
|
return (long) val;
|
|
}
|
|
} else
|
|
#endif
|
|
if (likely(PyLong_Check(x))) {
|
|
if (is_unsigned) {
|
|
#if CYTHON_COMPILING_IN_CPYTHON && PY_MAJOR_VERSION >= 3
|
|
#if CYTHON_USE_PYLONG_INTERNALS
|
|
if (sizeof(digit) <= sizeof(long)) {
|
|
switch (Py_SIZE(x)) {
|
|
case 0: return 0;
|
|
case 1: return (long) ((PyLongObject*)x)->ob_digit[0];
|
|
}
|
|
}
|
|
#endif
|
|
#endif
|
|
if (unlikely(Py_SIZE(x) < 0)) {
|
|
PyErr_SetString(PyExc_OverflowError,
|
|
"can't convert negative value to long");
|
|
return (long) -1;
|
|
}
|
|
if (sizeof(long) <= sizeof(unsigned long)) {
|
|
__PYX_VERIFY_RETURN_INT(long, unsigned long, PyLong_AsUnsignedLong)
|
|
} else if (sizeof(long) <= sizeof(unsigned long long)) {
|
|
__PYX_VERIFY_RETURN_INT(long, unsigned long long, PyLong_AsUnsignedLongLong)
|
|
}
|
|
} else {
|
|
#if CYTHON_COMPILING_IN_CPYTHON && PY_MAJOR_VERSION >= 3
|
|
#if CYTHON_USE_PYLONG_INTERNALS
|
|
if (sizeof(digit) <= sizeof(long)) {
|
|
switch (Py_SIZE(x)) {
|
|
case 0: return 0;
|
|
case 1: return +(long) ((PyLongObject*)x)->ob_digit[0];
|
|
case -1: return -(long) ((PyLongObject*)x)->ob_digit[0];
|
|
}
|
|
}
|
|
#endif
|
|
#endif
|
|
if (sizeof(long) <= sizeof(long)) {
|
|
__PYX_VERIFY_RETURN_INT(long, long, PyLong_AsLong)
|
|
} else if (sizeof(long) <= sizeof(long long)) {
|
|
__PYX_VERIFY_RETURN_INT(long, long long, PyLong_AsLongLong)
|
|
}
|
|
}
|
|
{
|
|
#if CYTHON_COMPILING_IN_PYPY && !defined(_PyLong_AsByteArray)
|
|
PyErr_SetString(PyExc_RuntimeError,
|
|
"_PyLong_AsByteArray() not available in PyPy, cannot convert large numbers");
|
|
#else
|
|
long val;
|
|
PyObject *v = __Pyx_PyNumber_Int(x);
|
|
#if PY_MAJOR_VERSION < 3
|
|
if (likely(v) && !PyLong_Check(v)) {
|
|
PyObject *tmp = v;
|
|
v = PyNumber_Long(tmp);
|
|
Py_DECREF(tmp);
|
|
}
|
|
#endif
|
|
if (likely(v)) {
|
|
int one = 1; int is_little = (int)*(unsigned char *)&one;
|
|
unsigned char *bytes = (unsigned char *)&val;
|
|
int ret = _PyLong_AsByteArray((PyLongObject *)v,
|
|
bytes, sizeof(val),
|
|
is_little, !is_unsigned);
|
|
Py_DECREF(v);
|
|
if (likely(!ret))
|
|
return val;
|
|
}
|
|
#endif
|
|
return (long) -1;
|
|
}
|
|
} else {
|
|
long val;
|
|
PyObject *tmp = __Pyx_PyNumber_Int(x);
|
|
if (!tmp) return (long) -1;
|
|
val = __Pyx_PyInt_As_long(tmp);
|
|
Py_DECREF(tmp);
|
|
return val;
|
|
}
|
|
}
|
|
|
|
static int __Pyx_check_binary_version(void) {
|
|
char ctversion[4], rtversion[4];
|
|
PyOS_snprintf(ctversion, 4, "%d.%d", PY_MAJOR_VERSION, PY_MINOR_VERSION);
|
|
PyOS_snprintf(rtversion, 4, "%s", Py_GetVersion());
|
|
if (ctversion[0] != rtversion[0] || ctversion[2] != rtversion[2]) {
|
|
char message[200];
|
|
PyOS_snprintf(message, sizeof(message),
|
|
"compiletime version %s of module '%.100s' "
|
|
"does not match runtime version %s",
|
|
ctversion, __Pyx_MODULE_NAME, rtversion);
|
|
#if PY_VERSION_HEX < 0x02050000
|
|
return PyErr_Warn(NULL, message);
|
|
#else
|
|
return PyErr_WarnEx(NULL, message, 1);
|
|
#endif
|
|
}
|
|
return 0;
|
|
}
|
|
|
|
#ifndef __PYX_HAVE_RT_ImportModule
|
|
#define __PYX_HAVE_RT_ImportModule
|
|
static PyObject *__Pyx_ImportModule(const char *name) {
|
|
PyObject *py_name = 0;
|
|
PyObject *py_module = 0;
|
|
py_name = __Pyx_PyIdentifier_FromString(name);
|
|
if (!py_name)
|
|
goto bad;
|
|
py_module = PyImport_Import(py_name);
|
|
Py_DECREF(py_name);
|
|
return py_module;
|
|
bad:
|
|
Py_XDECREF(py_name);
|
|
return 0;
|
|
}
|
|
#endif
|
|
|
|
#ifndef __PYX_HAVE_RT_ImportType
|
|
#define __PYX_HAVE_RT_ImportType
|
|
static PyTypeObject *__Pyx_ImportType(const char *module_name, const char *class_name,
|
|
size_t size, int strict)
|
|
{
|
|
PyObject *py_module = 0;
|
|
PyObject *result = 0;
|
|
PyObject *py_name = 0;
|
|
char warning[200];
|
|
Py_ssize_t basicsize;
|
|
#ifdef Py_LIMITED_API
|
|
PyObject *py_basicsize;
|
|
#endif
|
|
py_module = __Pyx_ImportModule(module_name);
|
|
if (!py_module)
|
|
goto bad;
|
|
py_name = __Pyx_PyIdentifier_FromString(class_name);
|
|
if (!py_name)
|
|
goto bad;
|
|
result = PyObject_GetAttr(py_module, py_name);
|
|
Py_DECREF(py_name);
|
|
py_name = 0;
|
|
Py_DECREF(py_module);
|
|
py_module = 0;
|
|
if (!result)
|
|
goto bad;
|
|
if (!PyType_Check(result)) {
|
|
PyErr_Format(PyExc_TypeError,
|
|
"%.200s.%.200s is not a type object",
|
|
module_name, class_name);
|
|
goto bad;
|
|
}
|
|
#ifndef Py_LIMITED_API
|
|
basicsize = ((PyTypeObject *)result)->tp_basicsize;
|
|
#else
|
|
py_basicsize = PyObject_GetAttrString(result, "__basicsize__");
|
|
if (!py_basicsize)
|
|
goto bad;
|
|
basicsize = PyLong_AsSsize_t(py_basicsize);
|
|
Py_DECREF(py_basicsize);
|
|
py_basicsize = 0;
|
|
if (basicsize == (Py_ssize_t)-1 && PyErr_Occurred())
|
|
goto bad;
|
|
#endif
|
|
if (!strict && (size_t)basicsize > size) {
|
|
PyOS_snprintf(warning, sizeof(warning),
|
|
"%s.%s size changed, may indicate binary incompatibility",
|
|
module_name, class_name);
|
|
#if PY_VERSION_HEX < 0x02050000
|
|
if (PyErr_Warn(NULL, warning) < 0) goto bad;
|
|
#else
|
|
if (PyErr_WarnEx(NULL, warning, 0) < 0) goto bad;
|
|
#endif
|
|
}
|
|
else if ((size_t)basicsize != size) {
|
|
PyErr_Format(PyExc_ValueError,
|
|
"%.200s.%.200s has the wrong size, try recompiling",
|
|
module_name, class_name);
|
|
goto bad;
|
|
}
|
|
return (PyTypeObject *)result;
|
|
bad:
|
|
Py_XDECREF(py_module);
|
|
Py_XDECREF(result);
|
|
return NULL;
|
|
}
|
|
#endif
|
|
|
|
static int __pyx_bisect_code_objects(__Pyx_CodeObjectCacheEntry* entries, int count, int code_line) {
|
|
int start = 0, mid = 0, end = count - 1;
|
|
if (end >= 0 && code_line > entries[end].code_line) {
|
|
return count;
|
|
}
|
|
while (start < end) {
|
|
mid = (start + end) / 2;
|
|
if (code_line < entries[mid].code_line) {
|
|
end = mid;
|
|
} else if (code_line > entries[mid].code_line) {
|
|
start = mid + 1;
|
|
} else {
|
|
return mid;
|
|
}
|
|
}
|
|
if (code_line <= entries[mid].code_line) {
|
|
return mid;
|
|
} else {
|
|
return mid + 1;
|
|
}
|
|
}
|
|
static PyCodeObject *__pyx_find_code_object(int code_line) {
|
|
PyCodeObject* code_object;
|
|
int pos;
|
|
if (unlikely(!code_line) || unlikely(!__pyx_code_cache.entries)) {
|
|
return NULL;
|
|
}
|
|
pos = __pyx_bisect_code_objects(__pyx_code_cache.entries, __pyx_code_cache.count, code_line);
|
|
if (unlikely(pos >= __pyx_code_cache.count) || unlikely(__pyx_code_cache.entries[pos].code_line != code_line)) {
|
|
return NULL;
|
|
}
|
|
code_object = __pyx_code_cache.entries[pos].code_object;
|
|
Py_INCREF(code_object);
|
|
return code_object;
|
|
}
|
|
static void __pyx_insert_code_object(int code_line, PyCodeObject* code_object) {
|
|
int pos, i;
|
|
__Pyx_CodeObjectCacheEntry* entries = __pyx_code_cache.entries;
|
|
if (unlikely(!code_line)) {
|
|
return;
|
|
}
|
|
if (unlikely(!entries)) {
|
|
entries = (__Pyx_CodeObjectCacheEntry*)PyMem_Malloc(64*sizeof(__Pyx_CodeObjectCacheEntry));
|
|
if (likely(entries)) {
|
|
__pyx_code_cache.entries = entries;
|
|
__pyx_code_cache.max_count = 64;
|
|
__pyx_code_cache.count = 1;
|
|
entries[0].code_line = code_line;
|
|
entries[0].code_object = code_object;
|
|
Py_INCREF(code_object);
|
|
}
|
|
return;
|
|
}
|
|
pos = __pyx_bisect_code_objects(__pyx_code_cache.entries, __pyx_code_cache.count, code_line);
|
|
if ((pos < __pyx_code_cache.count) && unlikely(__pyx_code_cache.entries[pos].code_line == code_line)) {
|
|
PyCodeObject* tmp = entries[pos].code_object;
|
|
entries[pos].code_object = code_object;
|
|
Py_DECREF(tmp);
|
|
return;
|
|
}
|
|
if (__pyx_code_cache.count == __pyx_code_cache.max_count) {
|
|
int new_max = __pyx_code_cache.max_count + 64;
|
|
entries = (__Pyx_CodeObjectCacheEntry*)PyMem_Realloc(
|
|
__pyx_code_cache.entries, new_max*sizeof(__Pyx_CodeObjectCacheEntry));
|
|
if (unlikely(!entries)) {
|
|
return;
|
|
}
|
|
__pyx_code_cache.entries = entries;
|
|
__pyx_code_cache.max_count = new_max;
|
|
}
|
|
for (i=__pyx_code_cache.count; i>pos; i--) {
|
|
entries[i] = entries[i-1];
|
|
}
|
|
entries[pos].code_line = code_line;
|
|
entries[pos].code_object = code_object;
|
|
__pyx_code_cache.count++;
|
|
Py_INCREF(code_object);
|
|
}
|
|
|
|
#include "compile.h"
|
|
#include "frameobject.h"
|
|
#include "traceback.h"
|
|
static PyCodeObject* __Pyx_CreateCodeObjectForTraceback(
|
|
const char *funcname, int c_line,
|
|
int py_line, const char *filename) {
|
|
PyCodeObject *py_code = 0;
|
|
PyObject *py_srcfile = 0;
|
|
PyObject *py_funcname = 0;
|
|
#if PY_MAJOR_VERSION < 3
|
|
py_srcfile = PyString_FromString(filename);
|
|
#else
|
|
py_srcfile = PyUnicode_FromString(filename);
|
|
#endif
|
|
if (!py_srcfile) goto bad;
|
|
if (c_line) {
|
|
#if PY_MAJOR_VERSION < 3
|
|
py_funcname = PyString_FromFormat( "%s (%s:%d)", funcname, __pyx_cfilenm, c_line);
|
|
#else
|
|
py_funcname = PyUnicode_FromFormat( "%s (%s:%d)", funcname, __pyx_cfilenm, c_line);
|
|
#endif
|
|
}
|
|
else {
|
|
#if PY_MAJOR_VERSION < 3
|
|
py_funcname = PyString_FromString(funcname);
|
|
#else
|
|
py_funcname = PyUnicode_FromString(funcname);
|
|
#endif
|
|
}
|
|
if (!py_funcname) goto bad;
|
|
py_code = __Pyx_PyCode_New(
|
|
0, /*int argcount,*/
|
|
0, /*int kwonlyargcount,*/
|
|
0, /*int nlocals,*/
|
|
0, /*int stacksize,*/
|
|
0, /*int flags,*/
|
|
__pyx_empty_bytes, /*PyObject *code,*/
|
|
__pyx_empty_tuple, /*PyObject *consts,*/
|
|
__pyx_empty_tuple, /*PyObject *names,*/
|
|
__pyx_empty_tuple, /*PyObject *varnames,*/
|
|
__pyx_empty_tuple, /*PyObject *freevars,*/
|
|
__pyx_empty_tuple, /*PyObject *cellvars,*/
|
|
py_srcfile, /*PyObject *filename,*/
|
|
py_funcname, /*PyObject *name,*/
|
|
py_line, /*int firstlineno,*/
|
|
__pyx_empty_bytes /*PyObject *lnotab*/
|
|
);
|
|
Py_DECREF(py_srcfile);
|
|
Py_DECREF(py_funcname);
|
|
return py_code;
|
|
bad:
|
|
Py_XDECREF(py_srcfile);
|
|
Py_XDECREF(py_funcname);
|
|
return NULL;
|
|
}
|
|
static void __Pyx_AddTraceback(const char *funcname, int c_line,
|
|
int py_line, const char *filename) {
|
|
PyCodeObject *py_code = 0;
|
|
PyObject *py_globals = 0;
|
|
PyFrameObject *py_frame = 0;
|
|
py_code = __pyx_find_code_object(c_line ? c_line : py_line);
|
|
if (!py_code) {
|
|
py_code = __Pyx_CreateCodeObjectForTraceback(
|
|
funcname, c_line, py_line, filename);
|
|
if (!py_code) goto bad;
|
|
__pyx_insert_code_object(c_line ? c_line : py_line, py_code);
|
|
}
|
|
py_globals = PyModule_GetDict(__pyx_m);
|
|
if (!py_globals) goto bad;
|
|
py_frame = PyFrame_New(
|
|
PyThreadState_GET(), /*PyThreadState *tstate,*/
|
|
py_code, /*PyCodeObject *code,*/
|
|
py_globals, /*PyObject *globals,*/
|
|
0 /*PyObject *locals*/
|
|
);
|
|
if (!py_frame) goto bad;
|
|
py_frame->f_lineno = py_line;
|
|
PyTraceBack_Here(py_frame);
|
|
bad:
|
|
Py_XDECREF(py_code);
|
|
Py_XDECREF(py_frame);
|
|
}
|
|
|
|
static int __Pyx_InitStrings(__Pyx_StringTabEntry *t) {
|
|
while (t->p) {
|
|
#if PY_MAJOR_VERSION < 3
|
|
if (t->is_unicode) {
|
|
*t->p = PyUnicode_DecodeUTF8(t->s, t->n - 1, NULL);
|
|
} else if (t->intern) {
|
|
*t->p = PyString_InternFromString(t->s);
|
|
} else {
|
|
*t->p = PyString_FromStringAndSize(t->s, t->n - 1);
|
|
}
|
|
#else /* Python 3+ has unicode identifiers */
|
|
if (t->is_unicode | t->is_str) {
|
|
if (t->intern) {
|
|
*t->p = PyUnicode_InternFromString(t->s);
|
|
} else if (t->encoding) {
|
|
*t->p = PyUnicode_Decode(t->s, t->n - 1, t->encoding, NULL);
|
|
} else {
|
|
*t->p = PyUnicode_FromStringAndSize(t->s, t->n - 1);
|
|
}
|
|
} else {
|
|
*t->p = PyBytes_FromStringAndSize(t->s, t->n - 1);
|
|
}
|
|
#endif
|
|
if (!*t->p)
|
|
return -1;
|
|
++t;
|
|
}
|
|
return 0;
|
|
}
|
|
|
|
static CYTHON_INLINE PyObject* __Pyx_PyUnicode_FromString(char* c_str) {
|
|
return __Pyx_PyUnicode_FromStringAndSize(c_str, strlen(c_str));
|
|
}
|
|
static CYTHON_INLINE char* __Pyx_PyObject_AsString(PyObject* o) {
|
|
Py_ssize_t ignore;
|
|
return __Pyx_PyObject_AsStringAndSize(o, &ignore);
|
|
}
|
|
static CYTHON_INLINE char* __Pyx_PyObject_AsStringAndSize(PyObject* o, Py_ssize_t *length) {
|
|
#if __PYX_DEFAULT_STRING_ENCODING_IS_ASCII || __PYX_DEFAULT_STRING_ENCODING_IS_DEFAULT
|
|
if (
|
|
#if PY_MAJOR_VERSION < 3 && __PYX_DEFAULT_STRING_ENCODING_IS_ASCII
|
|
__Pyx_sys_getdefaultencoding_not_ascii &&
|
|
#endif
|
|
PyUnicode_Check(o)) {
|
|
#if PY_VERSION_HEX < 0x03030000
|
|
char* defenc_c;
|
|
PyObject* defenc = _PyUnicode_AsDefaultEncodedString(o, NULL);
|
|
if (!defenc) return NULL;
|
|
defenc_c = PyBytes_AS_STRING(defenc);
|
|
#if __PYX_DEFAULT_STRING_ENCODING_IS_ASCII
|
|
{
|
|
char* end = defenc_c + PyBytes_GET_SIZE(defenc);
|
|
char* c;
|
|
for (c = defenc_c; c < end; c++) {
|
|
if ((unsigned char) (*c) >= 128) {
|
|
PyUnicode_AsASCIIString(o);
|
|
return NULL;
|
|
}
|
|
}
|
|
}
|
|
#endif /*__PYX_DEFAULT_STRING_ENCODING_IS_ASCII*/
|
|
*length = PyBytes_GET_SIZE(defenc);
|
|
return defenc_c;
|
|
#else /* PY_VERSION_HEX < 0x03030000 */
|
|
if (PyUnicode_READY(o) == -1) return NULL;
|
|
#if __PYX_DEFAULT_STRING_ENCODING_IS_ASCII
|
|
if (PyUnicode_IS_ASCII(o)) {
|
|
*length = PyUnicode_GET_DATA_SIZE(o);
|
|
return PyUnicode_AsUTF8(o);
|
|
} else {
|
|
PyUnicode_AsASCIIString(o);
|
|
return NULL;
|
|
}
|
|
#else /* __PYX_DEFAULT_STRING_ENCODING_IS_ASCII */
|
|
return PyUnicode_AsUTF8AndSize(o, length);
|
|
#endif /* __PYX_DEFAULT_STRING_ENCODING_IS_ASCII */
|
|
#endif /* PY_VERSION_HEX < 0x03030000 */
|
|
} else
|
|
#endif /* __PYX_DEFAULT_STRING_ENCODING_IS_ASCII || __PYX_DEFAULT_STRING_ENCODING_IS_DEFAULT */
|
|
#if !CYTHON_COMPILING_IN_PYPY
|
|
#if PY_VERSION_HEX >= 0x02060000
|
|
if (PyByteArray_Check(o)) {
|
|
*length = PyByteArray_GET_SIZE(o);
|
|
return PyByteArray_AS_STRING(o);
|
|
} else
|
|
#endif
|
|
#endif
|
|
{
|
|
char* result;
|
|
int r = PyBytes_AsStringAndSize(o, &result, length);
|
|
if (unlikely(r < 0)) {
|
|
return NULL;
|
|
} else {
|
|
return result;
|
|
}
|
|
}
|
|
}
|
|
static CYTHON_INLINE int __Pyx_PyObject_IsTrue(PyObject* x) {
|
|
int is_true = x == Py_True;
|
|
if (is_true | (x == Py_False) | (x == Py_None)) return is_true;
|
|
else return PyObject_IsTrue(x);
|
|
}
|
|
static CYTHON_INLINE PyObject* __Pyx_PyNumber_Int(PyObject* x) {
|
|
PyNumberMethods *m;
|
|
const char *name = NULL;
|
|
PyObject *res = NULL;
|
|
#if PY_MAJOR_VERSION < 3
|
|
if (PyInt_Check(x) || PyLong_Check(x))
|
|
#else
|
|
if (PyLong_Check(x))
|
|
#endif
|
|
return Py_INCREF(x), x;
|
|
m = Py_TYPE(x)->tp_as_number;
|
|
#if PY_MAJOR_VERSION < 3
|
|
if (m && m->nb_int) {
|
|
name = "int";
|
|
res = PyNumber_Int(x);
|
|
}
|
|
else if (m && m->nb_long) {
|
|
name = "long";
|
|
res = PyNumber_Long(x);
|
|
}
|
|
#else
|
|
if (m && m->nb_int) {
|
|
name = "int";
|
|
res = PyNumber_Long(x);
|
|
}
|
|
#endif
|
|
if (res) {
|
|
#if PY_MAJOR_VERSION < 3
|
|
if (!PyInt_Check(res) && !PyLong_Check(res)) {
|
|
#else
|
|
if (!PyLong_Check(res)) {
|
|
#endif
|
|
PyErr_Format(PyExc_TypeError,
|
|
"__%.4s__ returned non-%.4s (type %.200s)",
|
|
name, name, Py_TYPE(res)->tp_name);
|
|
Py_DECREF(res);
|
|
return NULL;
|
|
}
|
|
}
|
|
else if (!PyErr_Occurred()) {
|
|
PyErr_SetString(PyExc_TypeError,
|
|
"an integer is required");
|
|
}
|
|
return res;
|
|
}
|
|
#if CYTHON_COMPILING_IN_CPYTHON && PY_MAJOR_VERSION >= 3
|
|
#if CYTHON_USE_PYLONG_INTERNALS
|
|
#include "longintrepr.h"
|
|
#endif
|
|
#endif
|
|
static CYTHON_INLINE Py_ssize_t __Pyx_PyIndex_AsSsize_t(PyObject* b) {
|
|
Py_ssize_t ival;
|
|
PyObject *x;
|
|
#if PY_MAJOR_VERSION < 3
|
|
if (likely(PyInt_CheckExact(b)))
|
|
return PyInt_AS_LONG(b);
|
|
#endif
|
|
if (likely(PyLong_CheckExact(b))) {
|
|
#if CYTHON_COMPILING_IN_CPYTHON && PY_MAJOR_VERSION >= 3
|
|
#if CYTHON_USE_PYLONG_INTERNALS
|
|
switch (Py_SIZE(b)) {
|
|
case -1: return -(sdigit)((PyLongObject*)b)->ob_digit[0];
|
|
case 0: return 0;
|
|
case 1: return ((PyLongObject*)b)->ob_digit[0];
|
|
}
|
|
#endif
|
|
#endif
|
|
#if PY_VERSION_HEX < 0x02060000
|
|
return PyInt_AsSsize_t(b);
|
|
#else
|
|
return PyLong_AsSsize_t(b);
|
|
#endif
|
|
}
|
|
x = PyNumber_Index(b);
|
|
if (!x) return -1;
|
|
ival = PyInt_AsSsize_t(x);
|
|
Py_DECREF(x);
|
|
return ival;
|
|
}
|
|
static CYTHON_INLINE PyObject * __Pyx_PyInt_FromSize_t(size_t ival) {
|
|
#if PY_VERSION_HEX < 0x02050000
|
|
if (ival <= LONG_MAX)
|
|
return PyInt_FromLong((long)ival);
|
|
else {
|
|
unsigned char *bytes = (unsigned char *) &ival;
|
|
int one = 1; int little = (int)*(unsigned char*)&one;
|
|
return _PyLong_FromByteArray(bytes, sizeof(size_t), little, 0);
|
|
}
|
|
#else
|
|
return PyInt_FromSize_t(ival);
|
|
#endif
|
|
}
|
|
|
|
|
|
#endif /* Py_PYTHON_H */
|