Commit Graph

223 Commits

Author SHA1 Message Date
Rémy Léone 9b7176dd9d [DOC] Fix broken links 2016-03-23 12:45:34 -07:00
Andreas Mueller 1e5820b0ad Semantics of ``assert_almost_equal`` now consistent on floats and arrays. see https://github.com/numpy/numpy/issues/5200 2016-02-15 14:09:18 +01:00
giorgiop 58c859e7ba Limit the number of thread and force install libgfortran 2016-02-06 18:56:03 +01:00
giorgiop 6470a83f99 MAINT speed up test_kernels 2016-02-06 18:55:23 +01:00
giorgiop dd6ab4e896 MAINT speed up test_gpr 2016-02-06 18:55:23 +01:00
giorgiop 8d270fb40c MAINT speed up test_gpc 2016-02-06 18:55:22 +01:00
Olivier Grisel 4ae03d1bab Merge pull request #5701 from ziky90/gp-comparison-fixes
[MRG + 1] Fix 5663: string comparison on arrays in new Gaussian process
2016-02-03 16:34:11 +01:00
seales 0485ada58b General spelling fixes 2015-12-16 09:46:42 -08:00
Andreas Mueller 2653833a07 DOC some fixes to the doc build. 2015-11-03 12:23:23 -05:00
Zikes, Jan b9fdeb056d shortened if condition based on glouppe's suggestion 2015-11-03 15:35:10 +01:00
Zikes, Jan 149aade763 Fixed string comparison on arrays in new Gaussian process described in issue #5663 2015-11-03 14:50:17 +01:00
Rémy Léone c95ee28961 remove useless pass 2015-10-31 10:02:35 +01:00
Raghav R V 8878088b19 FIX inspect.argspect is deprecated; use signature 2015-10-24 10:27:26 +02:00
Gilles Louppe 4bcfedb813 FIX: GaussianProcess will be deprecated in 0.20, not 0.19 2015-10-21 10:59:03 +02:00
Gilles Louppe 9758e25735 FIX: gaussian_process will be deprecated in 0.19, not 0.18 2015-10-20 09:34:34 +02:00
Jan Hendrik Metzen cea3f29e0f TST test_lml_precomputed() checks only for equality in first 7 digits 2015-10-19 18:07:15 +02:00
Jan Hendrik Metzen edc4a651c6 ADD Mixins for normalized and stationary kernels 2015-10-19 18:07:14 +02:00
Jan Hendrik Metzen 2649598c64 FIX Enforcing y to be numeric in GPR and fixing python3 issue with maps 2015-10-19 18:07:14 +02:00
Jan Hendrik Metzen 3957fc3b34 ENH GPR.log_marginal_likelihood() returns the current log-likelihood if no theta vector is provided 2015-10-19 18:07:14 +02:00
Jan Hendrik Metzen c3a41a310f FIX String comparison via equality and not identity in Hyperparameter.__init__ 2015-10-19 18:07:14 +02:00
Jan Hendrik Metzen 8f77ced609 MISC Changing default for copy_X_train to True in GaussianProcessClassifier 2015-10-19 18:07:14 +02:00
Jan Hendrik Metzen e2a340a4ee REF More meaningful names for hyperparameters of GP kernels 2015-10-19 18:07:14 +02:00
Jan Hendrik Metzen 2dd1f285b9 PEP8 Making pep8 and pyflakes happy 2015-10-19 18:07:14 +02:00
Jan Hendrik Metzen 213a6be540 FIX Fix message of ValueError for wrong shape of alpha in GPR 2015-10-19 18:07:14 +02:00
Jan Hendrik Metzen 1c4b23f47b MISC copy_X_train defaults to True in GPR and GPC 2015-10-19 18:07:14 +02:00
Jan Hendrik Metzen 98e8093c93 FIX Further python3 related fixes 2015-10-19 18:07:14 +02:00
Jan Hendrik Metzen 55d26aa9a6 FIX Fixing test_kernel_theta 2015-10-19 18:07:14 +02:00
Jan Hendrik Metzen f76e64c9c7 FIX Fix failing tests (doctest, order of hyperparameters, pairwise_kernels) 2015-10-19 18:07:14 +02:00
Jan Hendrik Metzen 1813322d0a DOC Documenting GP kernel API 2015-10-19 18:07:14 +02:00
Jan Hendrik Metzen e87fad31fb REF Renaming max_iter to max_iter_predict in GaussianProcessClassifier 2015-10-19 18:07:14 +02:00
Jan Hendrik Metzen c85177ef51 DEL Removing bounds.setter in kernels.py 2015-10-19 18:07:14 +02:00
Jan Hendrik Metzen eb54b496d2 REF Removing theta_vars attribute from kernels and using Hyperparameter instances instead 2015-10-19 18:07:14 +02:00
Jan Hendrik Metzen 3f1a0f1a5a TST Adding two unittests for testing GP kernels
test_kernel_versus_pairwise() checks that GP kernels can also be used as pairwise kernels.
test_set_get_params() checks that set_params()/get_params() is consistent with kernel.theta.
2015-10-19 18:07:14 +02:00
Jan Hendrik Metzen 4c40f64753 FIX theta_vars correctly supported in KernelOperators 2015-10-19 18:07:14 +02:00
Jan Hendrik Metzen d344fa6588 ENH Full support of (deep) get_params() and set_params() in GP kernels 2015-10-19 18:07:14 +02:00
Jan Hendrik Metzen 65555b300b REF Renaming sigma_squared_n to alpha (consistency with Ridge) 2015-10-19 18:07:13 +02:00
Jan Hendrik Metzen d0eb99be76 ENH More efficient computation of K_gradient for anisotropic Matern kernel 2015-10-19 18:07:13 +02:00
Jan Hendrik Metzen c6db24e56f REF Several small changes based on @eickenberg's suggestions 2015-10-19 18:07:13 +02:00
Jan Hendrik Metzen d34b7ddbfc REF Realizing multi-class GPC bei delegating to OneVsRest or OneVsOne
Delegation is more flexible than subclassing.
2015-10-19 18:07:13 +02:00
Jan Hendrik Metzen a6d564b4bb TST Testing n_jobs option of GaussianProcessClassifier 2015-10-19 18:07:13 +02:00
Jan Hendrik Metzen 0c255e6c41 FIX Undoing regression_model and correlation_model deprecation
Using the deprecation decorator caused issues when pickling the GaussianProcess estimator.
2015-10-19 18:07:13 +02:00
Jan Hendrik Metzen 03718f80fa FIX Remove BinaryGaussianProcessClassifierLaplace from packages __all__ list 2015-10-19 18:07:13 +02:00
Jan Hendrik Metzen 34506ad705 COS Making BinaryGaussianProcessClassifierLaplace private 2015-10-19 18:07:13 +02:00
Jan Hendrik Metzen 68be69f0f7 MISC Deprecating legacy GP implementation 2015-10-19 18:07:13 +02:00
Jan Hendrik Metzen 032c2a763b FIX Added missing import of ConstantKernel in gpc.py 2015-10-19 18:07:13 +02:00
Jan Hendrik Metzen 9b86186ceb COS Removing keyword magic from PairwiseKernel 2015-10-19 18:07:13 +02:00
Jan Hendrik Metzen 83bc6c2440 ENH Adding max_iter parameter for Newton iteration in GPC 2015-10-19 18:07:13 +02:00
Jan Hendrik Metzen c57aa64312 ENH X_train_ can be copied if requested 2015-10-19 18:07:13 +02:00
Jan Hendrik Metzen adc7451201 PEP8 Fixing PEP8 issues in gaussian_process package 2015-10-19 18:07:13 +02:00
Jan Hendrik Metzen 59d754ba90 FIX Hiding method decision_function in GaussianProcessClassifier 2015-10-19 18:07:13 +02:00