b1fc5c30bd
TST Replace pytest.warns(None) in test_gpc.py ( #22960 )
2022-03-27 13:22:00 +02:00
5b901fe573
TST Replace pytest.warns(None) in test_gpr.py ( #22959 )
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Co-authored-by: Theis Hjortkjær <theis@Theiss-MacBook-Pro.local>
2022-03-26 14:29:09 -04:00
3d4ee9e9dc
MNT Remove utf-8 encoding declarations ( #21260 )
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Co-authored-by: Jérémie du Boisberranger <34657725+jeremiedbb@users.noreply.github.com>
2022-03-14 17:59:36 +01:00
d135a0f8db
MNT additional cleaning in test for 1.1 ( #22661 )
2022-03-03 10:31:02 +01:00
1fc86b6aac
MNT Update black to stable version ( #22474 )
2022-02-15 11:36:26 +01:00
3786daf7dc
BUG Fix covariance and stdev shape in GPR with normalize_y ( #22199 )
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Co-authored-by: Guillaume Lemaitre <g.lemaitre58@gmail.com>
Co-authored-by: Nakamura-Zimmerer, Tenavi (ARC-AF) <tenavi.nakamura-zimmerer@nasa.gov>
2022-02-14 16:18:23 -05:00
b519d6c748
ENH Fix AttributeError of compound kernel of Gaussian processes ( #22223 )
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* Catch CompoundKernel in GPC
* added Changelog
* updated the error message and docs
* removed spacebar in docs
* updated docs and test
* Update doc/whats_new/v1.1.rst
Co-authored-by: Thomas J. Fan <thomasjpfan@gmail.com>
* changelog updated
Co-authored-by: Thomas J. Fan <thomasjpfan@gmail.com>
2022-01-18 18:27:30 +01:00
55f0a12ca5
DOC Fix doc by adding a missing closing parenthesis in _gpr.py ( #22184 )
2022-01-11 11:31:35 -05:00
510fb587c6
DOC fix typo in gaussian_process_regressor ( #21653 )
2021-11-15 15:14:04 +01:00
9b210ae8ff
FIX compute y_std and y_cov properly with multi-target in GPR ( #20761 )
2021-10-20 22:21:39 +02:00
8d81fabec3
DOC move versionadded misplaced ( #21162 )
2021-09-27 12:55:38 +02:00
20d5eaf426
DOC fix an import in the docsting of RationalQuadratic ( #21156 )
2021-09-27 11:37:04 +02:00
01b9b5ae21
DOC Fix sphinx's links to Glossary ( #21094 )
2021-09-21 10:01:17 -04:00
f71c031314
DOC Typos found by codespell ( #21069 )
2021-09-17 19:04:54 +02:00
0b782bc3ed
DOC Ensures that GaussianProcessRegressor passes numpydoc validation ( #20981 )
2021-09-09 11:02:52 +02:00
786c4e5e39
DOC Adds feature_names_in_ to docstrings ( #20787 )
2021-08-26 13:44:45 +02:00
3659a2038f
DOC ensures GaussianProcessClassifier is passing numpydoc validation ( #20393 )
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Co-authored-by: Roman Yurchak <rth.yurchak@gmail.com>
2021-06-29 10:42:22 +02:00
3ae7c76153
STY Enables black with experimental_string_processing=true ( #20412 )
2021-06-29 09:47:04 +02:00
7b715111bf
EHN/DOC add reference and small optimizations for GPR ( #19952 )
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Co-authored-by: Ian <iwhalvic@gmail.com>
Co-authored-by: Chiara Marmo <cmarmo@users.noreply.github.com>
Co-authored-by: Julien Jerphanion <git@jjerphan.xyz>
2021-06-23 18:29:44 +02:00
5b3721c480
MAINT Skip unstable GPR tests on 32 bit Python [cd build] ( #20334 )
2021-06-23 15:02:09 +02:00
983cfae8ed
TST USes pytest.approx for floats in test_lml_precomputed ( #20330 )
2021-06-23 09:42:17 +02:00
351ace7935
STY Uses black's with target_version >= 3.7 ( #20294 )
2021-06-17 15:50:27 -04:00
82df48934e
MNT Applies black formatting to most of the code base ( #18948 )
2021-06-17 14:21:09 -04:00
1cd282d600
DOC add n_features_in_ in the documentation ( #20236 )
2021-06-09 16:58:03 +02:00
f6e6ad2d9e
MNT clean futurewarning for 1.0 | _deprecate_positional_args ( #20002 )
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Co-authored-by: Olivier Grisel <olivier.grisel@ensta.org>
Co-authored-by: Thomas J. Fan <thomasjpfan@gmail.com>
2021-05-14 11:30:27 -04:00
7b1c9afcaf
FIX Use cho_solve when return_std=True for GaussianProcessRegressor ( #19939 )
2021-04-27 18:23:08 +02:00
b84afe541c
FIX prevent division by zero with constant target in GPR ( #19703 )
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Co-authored-by: Sasha Fonari <fonari@schrodinger.com>
Co-authored-by: Chiara Marmo <cmarmo@users.noreply.github.com>
Co-authored-by: Guillaume Lemaitre <g.lemaitre58@gmail.com>
2021-04-21 20:39:07 +02:00
7b343ddd53
CLN Improve doc/error consistency for GaussianProcessRegressor ( #19687 )
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Co-authored-by: Thomas J. Fan <thomasjpfan@gmail.com>
2021-04-12 07:51:22 -04:00
071ddc75e9
Removed assert_warns_message from gaussian_process/tests ( #19697 )
2021-03-19 16:26:15 +01:00
e3e4a778d3
MNT Remove absolute imports ( #19668 )
2021-03-14 12:36:49 +01:00
26c5530e79
MNT Set non-interactive installation mode for the pypy job ( #19461 )
2021-02-22 21:22:49 +01:00
7729cb4b14
FIX RuntimeWarning by dividing by zero in test_kernel_gradient ( #19396 )
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Co-authored-by: Julien Jerphanion <git@jjerphan.xyz>
Co-authored-by: Jérémie du Boisberranger <34657725+jeremiedbb@users.noreply.github.com>
Co-authored-by: Roman Yurchak <rth.yurchak@gmail.com>
2021-02-11 16:21:20 +01:00
8f72c2a334
ENH Adds n_features_in_ checking in gaussian_process ( #18743 )
2021-01-02 22:31:19 +01:00
8aa6f076a2
MNT Catches scipy 1.3.0 for using deprecated tostring method ( #18755 )
2020-11-06 18:58:38 +01:00
0864c58968
DOC Clarify GaussianProcessRegressor default kernel behavior ( #18518 )
2020-10-05 18:58:14 +11:00
2828a889bb
DOC Resolve confusion about the role of alpha in Gaussian Process Regression ( #15990 )
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Co-authored-by: Chiara Marmo <cmarmo@users.noreply.github.com>
Co-authored-by: Christian Lorentzen <lorentzen.ch@gmail.com>
2020-09-17 23:31:17 +02:00
ecad0c6988
DOC Add None as valid option to random_state for gaussian_process module ( #18252 )
2020-08-26 11:05:26 +02:00
eb7b15817e
DOC clarify the kernel gradient for GaussianProcesses ( #18115 )
2020-08-16 09:54:18 +10:00
c5ef2e985c
DOC Fix doc of defaults in gaussion_process._gpr.py ( #18075 )
2020-08-04 13:58:29 +02:00
0550793bd6
FIX inconsistent hyperparameter and bounds issue in GP kernels ( #17946 )
2020-07-18 11:27:31 +02:00
8f63e9144f
FIX Add warning for GP's hyperparameters ( #12673 )
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* Add a warning for GP Regressor if optimized hyperparameter matches one of its bounds
* pep8 fix
* Add a test and use np.isclose
* More verbose warning message
* remove print
* Ad a more precise warning and update tests
* fix warning and update tests
* fix test dims
* fix multiple dimensions test
* fix pep8
* change variable name
* add warning for GP classifier
* tests for gpc
* pep8 fix
* put the warning in a function
* add comment to warning function
* update name in gpr and gpc
* update whats_new
* update whats_new
* update whats_new
* remove merge conflict text
* add WhiteKernel
* put the log in the last version
2020-07-17 10:28:17 +02:00
99baa5084f
DOC Add explanation of n_jobs in gaussian_process/_gpc.py ( #17716 )
2020-06-25 14:31:08 +02:00
4a97ad49c1
DOC add missing attributes in GaussianProcessClassifier ( #17698 )
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Co-authored-by: Beatriz San Miguel <beatriz.sanmiguelgonzalez@uk.fujitsu.com>
Co-authored-by: Loïc Estève <loic.esteve@ymail.com>
Co-authored-by: Guillaume Lemaitre <g.lemaitre58@gmail.com>
2020-06-24 18:38:28 +02:00
a704fee26d
DOC Add example to CompoundKernel ( #17653 )
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Co-authored-by: Guillaume Lemaitre <g.lemaitre58@gmail.com>
2020-06-23 12:05:43 +02:00
4ea7fd687f
DOC Adding examples to gaussian_process.kernels.Hyperparameter docstring ( #17450 )
2020-06-22 15:48:58 +02:00
d9ae80eec6
DOC Add example for PairwiseKernel ( #17601 )
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* Add example for PairwiseKernel
* Remove empty line
* Do not return standard deviation
It is not really needed in this minimal example.
* Implement classifier example
2020-06-17 12:38:14 +02:00
ac8cbb3799
[MRG] More deprecation for 0.24 ( #17142 )
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* normalize_components in sparsePCA
* changed default strategy of Dummy to prior and removed outputs_2d ttribute
* removed usage of None to drop estimator in ensemble and behaviour param of IsolationForest
* remove support for drop=None in Voting
* removed some warning decorators
* remove feature_extraction.extract_patches
* removed VectorizerMixin and copy parameter from TFIDFVectorizer
* kernel.set_params now raises attributeerror
* removed fig from plot_partial_dependence
* removed iid parameter of search estimators
* removed brier_scorer
* raise error in split when shuffle is False and random_state is not None
* removed MultiOutputEstimator
* removed base classes of NaiveBayes
* removed drop from pipeline
* removed utils in random_projection
* removed presort and classes_ in trees
* flake8
* fixed some tests
* flake
* fixed docstring
* fixed other one
* some left
* mmmm
2020-05-20 16:04:14 -04:00
7e15285d2e
API make gaussian_process __init__ params kwarg ( #16870 )
2020-04-20 13:48:36 -04:00
e9b7883e12
Fix wrong optimization for Log Likelihood Gradient ( #16047 )
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Fixes #16046
2020-03-18 09:34:50 +11:00
438bb3a438
MNT Remove unused imports ( #16665 )
2020-03-11 10:01:51 +11:00
Theis Ferré Hjortkjær