0f94f2962b
MNT simple deprecations and removals for 0.21 ( #12238 )
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Part of #11992 .
These were all the things that seemed pretty straight-forward. It's actually a bit bulky but should still be easy to review, hopefully.
2018-10-11 14:56:37 -04:00
6a2d8d5bbc
[MRG+2] BUILD Rewrite setup.py files to handle cython dependencies ( #7719 )
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* Rewriting of cythonization in setup.py
By using Cython.Build.cythonize and switching between .c and .pyx files
as appropriate cython dependencies are correctly taken into account.
* Use cythonize once on the root config rather than in each subpackage
* Fix for Windows
* Remove caching from Travis
Cython dependencies are taken care of by Cython.Build.cythonize and
based on file timestamps, so .C and .so files will always be rebuild
from scratch on each build in Travis.
* Specify .pyx in setup.files for cython generated extensions
More natural this way. Tweak the extensions to generate from .c and .cpp
files for a release.
* COSMIT Remove commented out code
* Check cython version is greater than 0.23
* COSMIT better names for functions
* flake8 fix (imported module not at top of file)
* Install cython 0.23 for Python 2.6
now that cython >= 0.23 requirement is enforced in setup.py
* Use module constant for minimum required cython version
* Fix Travis install.sh
No easy way to put comments inside multi-line command
2016-11-02 22:57:04 +11:00
e743cf75f5
MAINT: re-organize setup.py & make sure all tests are discoverable by nose
2016-05-13 06:57:09 -07:00
f7d14b365d
MISC rename random.pyx to _random.pyx
2014-07-14 20:47:17 +02:00
bbb8f1d1bf
Moved sparsefuncs to sparsefuncs_fast
2014-03-27 13:20:45 +05:30
1ada65fea2
Merge branch 'master' into hc_linkage
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Conflicts:
sklearn/cluster/tests/test_hierarchical.py
2014-02-04 22:04:48 +01:00
bb743ddb2a
ENH speed up SVMlight loader using Cython's array support
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Loading the binary covtype dataset from
http://www.csie.ntu.edu.tw/~cjlin/libsvmtools/datasets/binary.html
now takes 1/3 less wall clock time, which includes disk I/O and
decompression (bzip2).
Got rid of ArrayBuilder in the process.
2014-01-05 22:10:02 +01:00
15434800d7
Merge master in hc_linkage
2013-10-28 16:23:05 +01:00
b8e1a6c357
ENH SGD Cython improvements
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* nogil declarations where possible (but no with nogil blocks, since the
performance benefit of those is not clear)
* use BLAS where appropriate
* replaced DOUBLE by double, INTEGER and int32 by int/np.intc, since that's
the type used by scipy.sparse
* explicit checks that dataset dims don't exceed INT_MAX
* replaced an np.all by an explicit loop (npymath library for C99 isfinite)
2013-09-07 18:24:36 +02:00
d5ac03caa0
MISC: move fast_dict to utils
2013-08-25 11:33:40 +02:00
e488649af4
ENH Add fast and stable logistic sigmoid to utils and RBM
2013-07-24 17:27:22 +02:00
4e1e1ab772
Now that the folder has more than just mst in it, rename to sparsetools, which should help with referencing it.
2013-07-22 10:27:26 +02:00
3ebd9ee775
Missed a spot
2013-07-22 10:27:25 +02:00
67cdef8078
Moved mst to a subfolder and added a README file
2013-06-04 13:57:15 +02:00
4c4f1cffb2
Minimal spanning tree backported from scipy 0.13
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No tests in this commit
2013-06-04 13:57:15 +02:00
68d2388f24
COSMIT translate lgamma replacement to C and clean it up
2013-01-31 01:22:08 +01:00
452ca22102
ENH: use lgamma function from John D. Cook
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Conflicts:
sklearn/metrics/cluster/expected_mutual_info_fast.c
sklearn/utils/lgamma.cpp
sklearn/utils/lgamma.pyx
sklearn/utils/setup.py
2013-01-13 14:03:45 +00:00
76c66a0dab
BUG Cholesky delete routines wouldn't compile on Solaris
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Fixed that and cleaned it up. Should solve #1510 .
2013-01-03 15:03:26 +01:00
966e10c252
COSMIT PEP8
2012-12-22 16:48:17 +01:00
754c2d9533
COSMIT pep8
2012-12-22 16:48:17 +01:00
a6ed58dc4d
ENH flatten random_projection module + add sklearn.utils.random
2012-12-21 14:48:00 +01:00
82a762f69d
COSMIT pep8
2012-08-10 11:06:42 +01:00
446611dbcf
MISC: build_utils: module rather than a subpackages
2012-07-26 11:45:20 +02:00
d8e30f1ca8
REF: hack to be able to share distutils utilities.
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We took the ugly trick from NumPy to separate build vs normal use of
sklearn imports.
2012-07-25 11:35:40 +01:00
c1c734af47
ENH put atlas checking in one place and load from there.
2012-07-20 23:45:26 +01:00
d4dc61b709
FIX trying to fix long-standing linker issue
2012-07-16 21:31:23 +01:00
b32180db46
BUILD: add libm onlyon posix systems
2012-05-06 15:32:59 +02:00
690aaf1d1f
- fix missing links to the C math libray
2012-05-06 15:32:59 +02:00
7fcb2dbb3e
moved WeightVector und SequentialDataset into seperate modules.
2012-03-07 20:09:05 +01:00
3ea19f0d82
renamed largescale -> large_scale
2012-03-06 08:10:51 +01:00
add24160c3
added largescale ext module to setup.py
2012-02-15 21:30:36 +01:00
ec20311e06
ENH: get the murmurhash to build properly
2012-01-16 08:11:50 +01:00
6f6697896b
first stab at trying to wrap MurmurHash3
2012-01-16 01:40:47 +01:00
7f53024ae9
remove unused imports
2011-12-23 09:27:40 -08:00
64adbcaddd
Implement mean_variance_axis0.
2011-12-19 16:28:21 +01:00
911eb2b6b6
COSMIT reindented for pep8
2011-11-20 21:18:41 +01:00
48fda638a5
ENH incrementally build arrays in SVMlight loader to reduce memory usage
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Memory use on covtype.binary [1] reduced by nearly 2/3, at the expense of
of a 40% slowdown.
[1] http://www.csie.ntu.edu.tw/~cjlin/libsvmtools/datasets/binary.html#covtype.binary
2011-11-17 19:43:00 +01:00
78dd8b5626
batch trailing spaces cleanup
2011-09-06 23:12:26 +02:00
ddf4b72109
Move project directory from scikits.learn to sklearn
2011-09-02 12:06:57 +02:00
68f27e3790
Revert "Move project directory from scikits.learn to sklearn"
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This reverts commit fd0d3b879d
2011-09-02 12:03:18 +02:00
fd0d3b879d
Move project directory from scikits.learn to sklearn
2011-09-02 11:38:24 +02:00
Andreas Mueller