f4e7d2b19a
Converting http to https (3)... ( #12302 )
2018-10-05 18:50:31 +02:00
adddf00433
[MRG] np.ones -> np.full ( #11628 )
2018-07-23 09:49:01 +02:00
553b5fb8f8
BLD fix sphx gallery errors ( #11307 )
2018-06-18 16:07:33 +10:00
d3f8b1e131
Use X and y in plot_lle_digits.py ( #10970 )
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rather than digits.data and digits.target
2018-04-13 08:07:32 +02:00
db127bd969
[MRG+1] Support minimal dependencies in examples ( #10351 )
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* Support minimal dependencies in examples
* bins="auto" only supported for numpy >= 1.11
* viridis is default cmap in matplotlib 2
* Use signature instead of viridis cmap
2018-01-08 21:36:28 +01:00
cb1b6c4734
FIX t-SNE memory usage and many other optimizer issues ( #9032 )
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Use a sparse matrix representation of the neighbors.
Re-factored the QuadTree implementation to avoid insertion errors.
Various fixes in the gradient descent schedule to get the Barnes Hut and exact solvers to behave more robustly and consistently.
2017-07-12 22:56:02 +02:00
ae8223356b
Add example on t-sne perplexity
2017-06-30 21:10:41 +02:00
d0ce40e8b2
[MRG] remove "matplotlib <1" compatibility code from manifold examples ( #8552 )
2017-03-10 08:25:37 +01:00
bd5cecce44
update references link namespace
2016-08-03 20:23:50 +02:00
d2aaf0f4bb
doc: fix spellings of 'license'
2016-03-31 17:25:31 -07:00
9b7176dd9d
[DOC] Fix broken links
2016-03-23 12:45:34 -07:00
5b1aca08c2
MAINT Don't use deprecated 1d X (or deprecated matplotlib stuff) in examples.
2015-12-10 12:11:48 -05:00
d15f322111
Added colorblind compatibility
2015-10-23 19:47:32 +02:00
32ab5b5d24
DOC fix missing import in plot_lle_digits example
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and remove unused lda import.
2015-10-15 21:16:20 +02:00
679936f6bc
MAINT Deprecate LDA/QDA in favor of expanded names
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The LDA accronym for Linear Discriminant Analysis is ambiguous
because of the newly introduced Latent Dirichlet Allocation model.
We therefore deprecate the sklearn.lda.LDA and sklearn.lda.QDA
in favor of explicit names.
2015-09-11 15:32:11 +02:00
5b247f90e4
move around examples for better structure.
2014-07-17 09:35:30 +02:00
f59e08f21f
Correct examples
2014-05-28 20:04:46 +02:00
08c17d24c5
Use PCA initialization in examples
2014-05-28 19:56:10 +02:00
91e95df436
Integrate PCA initialization
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* update docstring
* add tests
2014-05-28 19:56:09 +02:00
58bcbaf0bd
Add optional PCA init to t-SNE
2014-05-28 19:56:09 +02:00
25a8c5f05a
Adress Gael's comments
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* rename _binary_search to _utils
* indent list elements
* use default parameters in examples
2014-05-28 19:56:09 +02:00
8d0fadabbc
Remove generalization
2014-05-28 19:56:09 +02:00
1b668d471c
Explain example
2014-05-28 19:56:09 +02:00
43b41f1ff7
Modify learning schedule
2014-05-28 19:56:09 +02:00
5de4c7ddc6
Remove example with digits dataset
2014-05-28 19:56:09 +02:00
8c969cb011
Add t-SNE to other examples
2014-05-28 19:56:09 +02:00
53e015c961
Simplify optimization
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* remove L-BFGS, gradient descent finds better visualizations (although the cost is often higher)
* learning_rate is a parameter
* learning schedule:
* initialize embedding with standard deviation 1
* 100 episodes with early exaggeration
* 20 iterations with momentum 0.5
* then switch to momentum 0.8
* default learning rate is 100, reasonable range is 100-500
2014-05-28 19:54:15 +02:00
4f2154a3e7
Compare t-SNE with other manifold learners
2014-05-28 19:54:15 +02:00
7a1f84eb69
Generalize with average of nearest neighbors
2014-05-28 19:51:08 +02:00
da43e4c230
Add t-SNE
2014-05-28 19:51:08 +02:00
5e20b8c664
Fixed pep8 violations. Some 'line too long' errors still remain.
2014-05-15 09:23:16 +05:30
2244098532
Updated examples to use pyplot for plotting instead of pylab
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Some examples not updated because scripts throw error (probably not
because of the change)
2014-05-15 02:18:07 +05:30
26eb3c606f
DOC/EXAMPLES fix more documentation errors, deprecated api usages.
2013-07-28 15:01:48 +02:00
8861833ec9
DOC spellfixes
2013-06-29 16:18:23 +03:00
dacfd8bd5d
DOC: Replaced all BSD style licenses with "BSD 3 clause"
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Replaced all BSD style licenses with "BSD 3 clause"
Not checked yet!
Removed duplicate "3 clause, 3 clause"
Removed trailing period if exists
Fixed some missed licences, still about 50 to do, but those can be automated
Think I got the last of them.
Apparently me and sed have different ideas of regex.
Found a few more
2013-04-30 08:34:46 +02:00
67ece78da4
COSMIT various typofixes
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As suggested by codespell <https://github.com/lucasdemarchi/codespell >
Signed-off-by: Stefano Lattarini <stefano.lattarini@gmail.com>
2013-04-11 21:22:14 +02:00
837093df7f
P3K: use print as a function in the examples
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Also corrected some typos, including two people misspelling their own names :)
2013-02-01 15:04:42 +01:00
4f1bc46fc1
COSMIT pep8 in examples
2013-01-17 12:51:12 +01:00
f5cfa64787
DOC mds example: suppress warning for explicit initialization
2013-01-16 22:57:36 +01:00
44fe9be14f
DOC fix in mds example (new interface)
2013-01-16 22:54:13 +01:00
9e3ef3985e
DOC some sphinx fixes
2013-01-16 22:51:24 +01:00
685c6529b6
ENH rename proximity to dissimilarity
2013-01-07 09:41:48 +01:00
1aacfbede8
ENH updated to more examples.
2013-01-07 09:41:48 +01:00
791a2241aa
FIX another typo, fix examples
2013-01-07 09:41:48 +01:00
9301f149a7
FIX the mds example did not plot the NMDS
2013-01-01 15:04:06 +01:00
12c8d3be79
ENH Rename Bernoulli random projection to sparse random projection
2012-12-21 14:48:01 +01:00
eb67e016eb
FIX typo mistakes
2012-12-21 14:47:58 +01:00
6cc099771c
FIX example import (name changed)
2012-12-21 14:34:23 +01:00
110842ab64
use random projections in the digits manifold example
2012-12-21 14:34:18 +01:00
0e77bcecd9
FIX spectral_embedding test erros, ADD spectral embedding to sphere examples
2012-12-13 13:05:28 +08:00
TakingItCasual