2f099334f9
MAINT deprecate 1d input arrays for all estimators
...
Passing 1D arrays to check_array, without setting `ensure_2d` to false now
raises a deprecation warning before reshaping it. This will later throw an
error.
All Scaler classes also throw warnings when 1D arrays are passed.
All unit tests/doctests are modified to ensure that no 1D arrays are passed,
except in explicit 1D array tests where the warnings have been silenced.
Additional tests are also included which check for different 1D array cases.
2D array tests with one samples and one features are also added and where
they failed, `check_array` call has been modified to give a more useful error
message
2015-09-09 15:49:58 +02:00
fb58d37846
Merge branch 'master' into pr_4009
...
Conflicts:
sklearn/neighbors/ball_tree.c
sklearn/neighbors/dist_metrics.c
sklearn/neighbors/dist_metrics.pyx
sklearn/neighbors/kd_tree.c
sklearn/neighbors/tests/test_neighbors.py
2015-08-30 11:54:40 +01:00
99d08b571e
DOC organise documentation hierarchy / table of contents
2015-06-12 08:09:41 +10:00
567a956338
Merge branch 'pr/4714' + pep8 fixes
...
Conflicts:
doc/modules/model_persistence.rst
doc/modules/pipeline.rst
doc/modules/svm.rst
doc/tutorial/basic/tutorial.rst
doc/tutorial/statistical_inference/supervised_learning.rst
sklearn/svm/classes.py
2015-06-08 11:31:51 +02:00
41788c353b
Changed SVM to use gamma='auto' by default. Deprecated gamma=0.0.
2015-06-05 22:47:43 +01:00
6d4bcda876
ENH refactor OVO decision function, use it in SVC for sklearn-like decision_function shape
2015-06-05 13:14:45 -04:00
867da316ff
DOC minor sphinx fixes
2015-06-04 16:29:19 -04:00
0fe613ebab
Add conventions section to userguide
2015-04-15 11:09:32 -04:00
deeaf0ad35
change default to shuffle=True in SGDClassifier and friends.
2015-03-03 11:56:23 -05:00
9bc4de8dae
some fixes for sphinx and in examples
2015-03-02 12:50:53 -05:00
63039b24bc
Added multithreading support for kneighbors search
2015-02-19 13:15:55 +03:00
e936dfa641
search C not gamma of linear svm in tutorial
2015-01-27 18:15:36 -05:00
164381c3ea
Spelling in heading newgroups -> newsgroups
...
The section title is "newgroups", this fixes it so that it matches the rest of the document.
2014-12-25 15:18:33 +02:00
e915fcc3ab
Changed default argument of precompute in ElasticNet and Lasso
...
Setting precompute to "auto" was found to be slower when n_samples > n_features
since the computation of the Gram matrix is computationally expensive and
outweighs the benefit of fitting the Gram for just one alpha.
2014-10-03 18:25:12 +02:00
4f2ff2dd7a
Small PEP8 fix, n_jobs attribute is compatible with both fit method and the constructor
2014-09-19 15:32:06 +05:30
25c03a7ff8
Added Deprecation warning
2014-09-19 14:39:35 +05:30
75e11c0b50
Merge pull request #3591 from MechCoder/refactor_logreg
...
[MRG] MAINT: Remove BaseLibLinear for LogisticRegression
2014-08-30 21:22:07 +10:00
34a4517983
ENH: Improved verbosity and denesting
2014-08-26 20:48:23 +02:00
959a4ac698
MAINT: Remove BaseLibLinear for LogisticRegression
2014-08-26 13:58:07 +02:00
4b82379c20
TST fix doctest for k-NN
2014-08-25 23:49:56 +02:00
4cd177758f
ENH: Merge MultinomialLR into LR with multi_class='multinomial'
2014-08-21 17:37:37 +02:00
763af9690a
DOC fix line references in tutorial
2014-08-20 21:00:54 +10:00
341ca9323b
DOC avoid the plot_ prefix in example where no plot
...
Also fix line reference
2014-08-20 21:00:54 +10:00
cf4cf60b7e
ENH Stochastic Coordinate Descent for ElasticNet & Lasso
2014-07-29 10:23:33 +02:00
e4111290b6
ENH: Weighted logistic regression for lbfgs and newton-cg
2014-07-22 16:57:41 +02:00
5b247f90e4
move around examples for better structure.
2014-07-17 09:35:30 +02:00
2eb1e98eef
MAINT ensure that examples figures are displayed in the correct order
2014-07-14 15:47:17 +02:00
c176ced74d
DOC double backticks for fixed-width (code) font
...
Fixes #3337 . Also other minor fixes while I was at it.
2014-07-06 14:18:33 +02:00
3729143bd0
Typo
2014-07-04 15:11:56 +02:00
9a4c9f2064
MAINT add docstring to explain the motivation of the fixture
2014-07-04 11:48:15 +02:00
ac45e5d03c
MAINT skip tests that require large datadownload under travis
2014-07-02 13:50:47 +02:00
df27e26156
model persistence doc, added improvements from ogrisel comments
2014-06-27 08:57:23 -03:00
8489c33010
added a new section on model persistence
2014-06-27 08:57:23 -03:00
926e651f44
Stop using some deprecated interfaces.
2014-06-08 22:16:26 +02:00
67b8601314
Minor fixes in the docs
2014-06-07 16:38:53 +02:00
eb86ff8ecd
Explain the -1 Python syntax.
2014-05-25 13:24:44 -06:00
bf5798ea16
Remove extraneous period.
2014-05-25 13:10:45 -06:00
46d27f566b
Use double backticks.
2014-05-25 13:08:38 -06:00
8f2e208503
Explicitly invoke the Python interpreter.
2014-05-25 13:03:47 -06:00
1928f6f01e
Merge pull request #3135 from ugurthemaster/patch-1
...
Update working_with_text_data.rst
2014-05-06 22:30:42 +02:00
880bf96cd3
Update working_with_text_data.rst
...
A few typos have been corrected.
2014-05-06 23:27:28 +03:00
b965452902
DOC: Change URL-based link to sphinx :ref:
2014-04-17 15:35:31 -06:00
a30b2fd54b
DOC: Remove dead link
...
Link to installation instructions was pointed to a non-existant
location.
2014-04-17 13:39:13 -06:00
b6eedcc210
DOC remove import scikits.learn from tutorial
...
I think this is mostly a distraction here;
probably better for readers to take it out.
2014-04-13 16:55:29 +02:00
b906d5338c
DOC: typo: 1e-2 is 0.01 not 100
2014-04-13 16:54:00 +02:00
e6e7acffe7
typo: "requiered" -> "required"
2014-04-13 09:39:57 -04:00
60b3120338
target is response, not explanatory
2014-04-11 18:36:32 -04:00
71a50af860
Minor grammar fix.
2014-03-16 09:44:35 +00:00
3ac34554e4
MISC: documentation and cosmits
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Address comments by @jnothman
2014-02-17 11:20:42 +01:00
0cd5251575
FIX: fix failing doctest
2014-02-17 08:37:07 +01:00
76206f1919
COSMIT: many cosmetic comments
...
Fixes remarks by @ogrisel, @agramfort, @larsman, @jnothman
2014-02-17 08:34:25 +01:00
75705e2b24
MISC: remove reference to deprecated Ward
2014-02-07 09:25:08 +01:00
de384755b0
MISC: typos in docs
2014-02-07 08:49:54 +01:00
1ada65fea2
Merge branch 'master' into hc_linkage
...
Conflicts:
sklearn/cluster/tests/test_hierarchical.py
2014-02-04 22:04:48 +01:00
b2473494d0
DOC: more context in embedded code
...
Fixes #2816
2014-02-02 12:07:55 +01:00
abe888d04a
sphinx colon error fix
2014-01-15 15:43:13 +01:00
11ec8368de
small fixes
2014-01-15 12:23:05 +01:00
1dcab45588
conflict fix
2014-01-15 11:47:26 +01:00
7013e243ff
FIX : n_jobs was missing from LassoCV
2014-01-11 21:39:25 +01:00
67d3bb2340
Python 3 fixes for the second exercise
2014-01-10 14:56:10 +01:00
65460d79a7
Python 3 fixes in exercises
2014-01-09 11:47:21 +01:00
d32d7ed4ed
Python 3 compat
2014-01-09 11:33:25 +01:00
ef6af87351
changed PCA to truncated SVD
2014-01-08 16:45:26 +01:00
99158e19b5
olivier suggestions
2014-01-08 15:22:53 +01:00
0ee004dbe3
whitespace removals
2014-01-08 14:49:30 +01:00
46c4bbbf79
where to from here section
2014-01-08 14:48:39 +01:00
aaa20caa47
recommit joel comments
2014-01-08 13:56:18 +01:00
6996bde28d
whatsnew conflict fix
2013-12-17 15:03:13 +01:00
a1aa44904f
Fixing small typos in the docs.
2013-12-04 10:52:23 -02:00
ae1ea1cbb7
update what`s new
2013-11-29 16:24:04 +01:00
0451b24141
remove extra headings from tuts page
2013-11-29 16:04:08 +01:00
acc897d31c
typo fix
2013-11-29 15:48:23 +01:00
65634f60a1
fix tutorials index, update dropdown menu in navbar, update stat_learning tutorial link on documentation.html page
2013-11-29 15:39:03 +01:00
f0a7062893
further changes to headings and subsections
2013-11-29 11:50:00 +01:00
209c93a7cb
remove face-recognition exercises, skeletons, etc and merge artifacts
2013-11-29 11:45:52 +01:00
8524c64711
changes to headings and sections
2013-11-29 11:23:32 +01:00
b583310d72
typo fix
2013-11-29 11:09:27 +01:00
c224111d49
redo typo fixes
2013-11-27 17:07:24 +01:00
e85ac0e05d
some cleanup, conflict fixes, squashes, re-dos
2013-11-27 16:59:52 +01:00
99e3245658
Merge branch 'master' into DOC_olivier_tut
2013-11-25 14:51:52 +01:00
ea7ad29123
sort out plot_iris vs plot_svm_iris
2013-11-03 22:10:57 -08:00
15434800d7
Merge master in hc_linkage
2013-10-28 16:23:05 +01:00
e3002c5efc
FIX #2372 : non-shuffling StratifiedKFold implementation and updated tests
2013-09-25 15:56:47 +02:00
0ab527804e
Revert "Fix accidental doctest breakage."
...
This reverts commit 4c95f5e00a
2013-09-20 13:27:48 +02:00
4c95f5e00a
Fix accidental doctest breakage.
2013-09-20 12:41:39 +02:00
9a9b9e85ed
DOC+COSMIT: typos, lots of them
...
Fixes #2102 . There's one typo left in joblib which is better fixed
upstream.
2013-09-13 16:29:42 +02:00
a45d23fcfd
DOC improve narrative docs on hierarchical clustering
2013-08-25 11:33:40 +02:00
9b5dff1677
redo old deletions
2013-08-07 10:04:18 +02:00
a25e4364f1
merge conflict fix
2013-08-07 09:47:08 +02:00
a390a0799a
commit added for hack-warning
2013-08-02 13:25:10 +02:00
3fa71e90c1
fix cut-off ML map
2013-07-31 13:57:52 +02:00
8229823650
fix broken directory name
2013-07-30 09:57:39 +02:00
c30a062bb1
fix and squash broken branch, remove all but section 3 and redo some docstring breaks
2013-07-30 09:36:12 +02:00
211e538627
flatten the tutorial / doc structure as proposed by @ogrisel
2013-07-28 11:15:03 +02:00
2d97949125
DOC update docstrings to reflect libsvm random_state
2013-07-27 19:50:25 +02:00
38b87559e4
DOC recommend understanding NumPy in the tutorial
2013-07-25 19:08:26 +02:00
0e5815726a
FIX: address @agramfort 's comments
2013-07-23 15:49:26 +02:00
f7f2db14bb
ENH: improve tutorial to be more clean.
2013-07-23 15:49:26 +02:00
17aff7d2f7
FIX: tutorial
2013-07-23 15:49:25 +02:00
9bd98c34f4
Merge branch 'pr_1732'
2013-07-14 11:43:22 -05:00
fe52584e83
Got all the doc-tests working
2013-07-10 10:52:25 -04:00
7b762d88bb
DOC: make doc tests pass
2013-07-07 20:24:00 -07:00
4b15cb5d0a
Tutorial Setup
2013-06-06 13:47:34 +02:00
f2e065dba6
tutorial index initial touchups
2013-05-27 11:19:47 +02:00
c3cac4b9c3
moved tutorial out of tutorial folder
2013-05-27 11:05:01 +02:00
820aab55e1
Placeholder to tutorials page
2013-05-22 15:12:54 +02:00
d69566c023
initial tutorial re-added with it`s commit history
2013-05-22 14:31:39 +02:00
89ba448457
remove duplicates for merging larsmans branch
2013-05-22 14:27:35 +02:00
d8da862361
Merge branch 'tutorial' into DOC_olivier_tut
2013-05-22 14:12:13 +02:00
331738f2b4
remove placehoder
2013-05-22 14:06:15 +02:00
fda420ebc6
Merge branch 'tutorial'
...
This merges in the master branch of the old tutorial at
https://github.com/scikit-learn/scikit-learn-tutorial and
http://scikit-learn.github.io/scikit-learn-tutorial/ .
2013-05-20 22:52:07 +02:00
9a64bc1933
DOC move old tutorial out of the way for merge
2013-05-20 22:52:01 +02:00
7c16dadc12
initial commit
2013-05-17 14:58:26 +02:00
962e2e1d99
maintenance scripts added for machine learning maps - needed for modifying the map in future
2013-05-14 21:28:30 +02:00
b2082b5d42
DOC added link to scipy lecture notes to tuts
2013-05-04 17:16:44 +02:00
05a7766c3c
resized image
2013-04-29 17:13:22 +02:00
cd9cffac81
layout fixes and top paragraph
2013-04-25 13:33:05 +02:00
ed643e18d7
sidebar added
2013-04-25 11:23:32 +02:00
021f515ef8
remove svg2html script,toctree section added,doc page for ml_map created
2013-04-24 20:05:52 +02:00
6261c4b964
rename image/html
2013-04-23 16:28:39 +02:00
8238a865e2
update tutorial page
2013-04-23 15:34:52 +02:00
e6ed507b20
intigrated to tutorial index
2013-04-23 15:28:04 +02:00
467c90486a
jquerys added
2013-04-23 01:58:47 +02:00
d6d2a5b323
last links fixed
2013-04-23 01:53:12 +02:00
574b9ed8e2
add further links
2013-04-23 01:15:06 +02:00
a999972a47
link fixes
2013-04-23 00:36:38 +02:00
1d3e480c44
image and html file added
2013-04-22 23:53:15 +02:00
ed52df3ee8
fix numbering for tutorials page
2013-04-20 17:06:41 +02:00
65d1ef5147
DOC FIX finite precision
2013-03-15 10:15:15 +01:00
0c94b55c63
ENH add randomized hyperparameter optimization
2013-03-03 20:56:39 +01:00
adb85bb487
fix doctest
2013-03-02 16:39:42 +01:00
85ec0fd1ae
P3K death to the print statement
2013-02-11 23:11:57 +01:00
0985264a4a
warning removal
2013-01-26 18:01:29 +01:00
0dd3e13771
FIX remaining doctests
2013-01-03 13:21:51 +01:00
9d5ed3a7c2
Feedback from @amueller
2013-01-02 17:24:35 +01:00
3352bbac31
Type-os and added great links to learning more about Machine Learning
2013-01-02 17:24:35 +01:00
ac2e0c7a1c
DOC copyedit tutorials
2012-11-10 11:16:39 +01:00
252f73c92e
COSMIT: pep8, wording, layout
2012-11-08 09:29:07 +01:00
c188755c2f
Edited docs to reflect change in kernel used.
2012-11-08 09:15:16 +01:00
425c6e9b83
DOC: further improvements to the model selection exercise
2012-10-27 16:49:22 +02:00
eca762dd9b
DOC: improve the model selection exercise
...
Fixes #1278
2012-10-25 18:12:15 +02:00
e64cea0342
ENH add random seed to logistic regression
2012-10-18 13:48:10 +02:00
51b06b8203
FIX doctests for max_iter
2012-10-16 16:46:48 +02:00
1b367e56e5
ENH set n_fold default to 3, rename k to n_fold in all doctests, docs, and examples
2012-10-10 19:10:29 +01:00
466479fe03
API : consistent use alpha_/alphas_ for alpha/alphas estimated by CV in linear models (issue #1041 )
2012-09-02 23:16:54 +02:00
e00d70602d
Merge pull request #991 from jakevdp/doc-update
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DOC: add tutorial links
2012-08-19 14:20:00 -07:00
da968171cf
DOC tutorial: explain what an estimator is
2012-08-04 01:26:27 +02:00
b3bedb5da8
DOC: add tutorial links
2012-08-01 08:25:01 -07:00
01572bf129
TST: fix doctest
2012-07-30 11:35:25 +02:00
df1e71149c
DOC: ward docstring and testing
2012-07-26 09:15:57 +02:00
4e7d9962f6
ENH fixed doctests, addressed comments.
2012-06-15 19:31:47 +02:00
4865777058
Merge branch 'master' of https://github.com/scikit-learn/scikit-learn
2012-05-30 11:53:03 +02:00
d9a6243c98
ENH rename k in clustering examples and doctests to n_clusters
2012-05-30 07:41:34 +02:00
2f89cd1edb
Added `note` to tutorial index for `doctest_mode` in `ipython`
2012-05-29 10:30:19 +02:00
25112d0069
DOC: more readable title
2012-05-07 08:18:16 +02:00
87f06b74ea
DOC more minor fixes
2012-05-06 23:33:55 +02:00
4e3f00833e
DOC minor fixes to rst and image paths
2012-05-06 23:28:31 +02:00
bae4e41418
DOC: cosmits on tutorials and videos
2012-05-06 19:59:46 +02:00
3c2e01f8be
DOC some doc corrections
2012-05-06 10:47:07 +02:00
3885dd8ac3
FIX: doctests for scale_C, took some liberties
2012-05-05 21:57:05 +02:00
15455263b7
API : change back default C to 1. explicitely and epsilon 0.1
2012-05-05 21:57:04 +02:00
5edfa06019
DOC docs and examples have scale_C removed
2012-05-05 21:57:04 +02:00
1c6797b832
Fixed some typos
2012-05-02 13:37:58 -03:00
80e6ec2e4a
MISC don't use private ``set_params`` method as that raises a warning.
2012-04-26 13:43:25 +02:00
55959ed879
COSMIT don't use deprecated attributes in tutorial.
2012-04-23 21:16:13 +02:00
fb4bedf94b
Merge pull request #747 from ibayer/posCoeff
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positivity constraint for lasso and elastic net
2012-04-11 00:06:06 -07:00
7a87d7f1c7
Merge pull request #742 from davidmarek/pdistance
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minkowski p-distance in sklearn.neighbors
2012-04-05 00:16:01 -07:00
987f0fb490
Merge pull request #751 from jaquesgrobler/master
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Removed `_plot` from the face recognition example
2012-04-03 07:45:11 -07:00
ca50d31a42
Removed `_plot` from the face recognition example
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updated tutorial page to use static image.
2012-04-03 13:20:01 +02:00
b7b7b62aff
fixed doctest
2012-04-01 19:22:50 +02:00
8474e94e9a
DOC sphinx/rst errors
2012-03-31 16:10:59 +02:00
a8b5110496
Fix doctest failure.
2012-03-31 21:11:43 +09:00
e761d69e8c
TEST: tested different p values in nearest neighbors
2012-03-31 13:02:10 +02:00
efd467cffd
Fixed broken image link
2012-03-27 15:27:14 +02:00
f62966d5b3
COSMIT Typo
2012-03-26 09:55:57 +02:00
2edfa60d66
BUG: fix doctests
2012-03-26 02:14:42 +02:00
6b1bc1744f
BUG: no plotting in doctests
2012-03-26 01:32:07 +02:00
7278dfe482
DOC: finish misc in tutorial
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@jaquesgrobler : there were still a few things to do :)
2012-03-26 01:20:53 +02:00
6c7a166ae0
fixed new doc-test error
2012-03-22 17:16:53 +01:00
0d63d785e7
Merge branch 'master' into WIP_tut
...
Conflicts:
examples/linear_model/plot_ols.py
2012-03-22 17:12:36 +01:00
66d8f4e3b0
spelling errors,edit curse of dimensionality, explain top-down
2012-03-21 10:08:15 +01:00
11408e71ab
spelling fixes
2012-03-20 08:49:35 +01:00
a161f3dbbe
fixed numbering in main User Guide
2012-03-12 10:50:21 +01:00
1890d6eefa
fixed typo,changed 2.2s numbering, fixed 4 examples in exercises
2012-03-12 10:19:01 +01:00
493c7cc327
path fix of moved figure
2012-03-11 23:45:43 +01:00
7f155e9d1a
moved exercises into seperate folder, neating up
2012-03-09 16:07:50 +01:00
1b06362a1a
fixed links & neatening
2012-03-08 15:21:53 +01:00
4ee5b5e3eb
Merge remote-tracking branch 'origin/master' into WIP_tut
2012-03-08 10:30:17 +01:00
17fa297ea6
added ... to ellipsis
2012-03-08 09:23:43 +01:00
e7a08add17
added ELLIPSIS to 4 examples
2012-03-08 09:06:51 +01:00
4cca090b05
replaced silence paramenter in makefile, links removed in stat_learn tutorial, big_toc_css copy deleted, heading changed in tutorial index, tutorial index info added
2012-03-07 17:08:14 +01:00
49c657ca52
examples merged to example pool
2012-03-07 12:15:46 +01:00
db38edb7ea
delete redundant file, merged some examples and updated links
2012-03-07 03:55:18 +01:00
bca803eb55
Merged a few examples into the example pool
2012-03-07 00:52:17 +01:00
30150cfdef
Merged some examples into examples folder.
...
- updated links accordingly
- renamed miss-spelt excercice to exercise
2012-03-06 23:40:49 +01:00
fc869043ca
3 files moved into main example pool - links to them updated
2012-03-06 13:23:48 +01:00
bd271ab65c
Better doctest time(wip),removed duplicate examples, update plot_ols.py
...
- I wish to replace the old plot_ols.py example with a new one which
uses the diabetes_dataset instead of synthetic data.
- references to changed example paths updated
2012-03-05 17:18:05 +01:00
f3ed2d7f34
Fixes for doctests
2012-03-02 11:53:07 +01:00
c6f619c918
All scikit tutorial images and links redone
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-plot_face_recognition's code was updated to latest face_recognition
2012-03-01 18:17:27 +01:00
43b962a210
Section 4 done - images/links/htmls for images
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-_plot_pca_3d renamed to plot_pca_3d
-plot_pca_3d still needs quiver, but plot works now
-plot_lena_ward added to plot ward clustering of lena
2012-03-01 17:16:41 +01:00
Vighnesh Birodkar