ac8cbb3799
[MRG] More deprecation for 0.24 ( #17142 )
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* normalize_components in sparsePCA
* changed default strategy of Dummy to prior and removed outputs_2d ttribute
* removed usage of None to drop estimator in ensemble and behaviour param of IsolationForest
* remove support for drop=None in Voting
* removed some warning decorators
* remove feature_extraction.extract_patches
* removed VectorizerMixin and copy parameter from TFIDFVectorizer
* kernel.set_params now raises attributeerror
* removed fig from plot_partial_dependence
* removed iid parameter of search estimators
* removed brier_scorer
* raise error in split when shuffle is False and random_state is not None
* removed MultiOutputEstimator
* removed base classes of NaiveBayes
* removed drop from pipeline
* removed utils in random_projection
* removed presort and classes_ in trees
* flake8
* fixed some tests
* flake
* fixed docstring
* fixed other one
* some left
* mmmm
2020-05-20 16:04:14 -04:00
9b39c4c4d2
TST Fix unreachable code in tests ( #16110 )
2020-02-16 14:41:26 +01:00
e1f7b631ce
ENH Allow usage of nu=inf in Matern kernel ( #15972 )
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Co-authored-by: Sam Dixon <sam.dixon@berkeley.edu>
2019-12-26 12:04:54 +01:00
8360786895
ENH Allowing Gaussian process kernels on structured data ( #15557 )
2019-11-15 16:07:36 -08:00
b92455a6b2
MAINT Deprecate all of utils.testing except all_estimators ( #15367 )
2019-10-28 17:28:56 +01:00
a7a834bdb7
ENH improved error anisotropic RationalQuadratic kernel ( #12603 )
2019-08-08 18:22:00 +10:00
0279108bef
API don't default get_params output to None in the future ( #14464 )
2019-07-28 23:37:47 +10:00
f3eb9d2206
[MRG] MNT removing assert_equal, etc -- continued ( #14232 )
2019-07-02 14:53:51 +10:00
19c068a2ec
MNT towards removing assert_equal, etc ( #14222 )
2019-07-01 09:13:32 -04:00
2bd87f6ed8
Remove python < 3.5 from CI ( #12746 )
2018-12-14 10:53:12 +01:00
f049ec72eb
TST Pytest parametrization part3 - feature_extraction, gaussian_process modules ( #11143 )
2018-06-04 22:23:29 +08:00
d9a0774afc
MAINT Always import signature from sklearn.utils.fixes ( #11019 )
2018-04-24 09:27:45 +10:00
39076ff385
fix deprecated comparison to string in GP ( #8518 )
2017-03-04 13:37:11 -08:00
0ec6664ff1
[MRG] Make tests runnable with pytest without error ( #8246 )
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* Make tests runnable with pytest without error.
Errors were due to pytest quirks with (deprecated) yield support.
* Add pytest build on Travis
and tweak pytest settings in setup.cfg
* Tweak comment
2017-02-20 13:08:09 +01:00
9f6b849c35
TST Change rstrip() to truncation in test function ( #8237 )
2017-01-27 08:41:03 +11:00
19aebe2431
use == instead of 'is' for string comparison ( #7422 )
2016-09-15 09:42:34 +10:00
3d1a2fdb5c
COSMIT don't use docstrings in tests (gp kernel tests) ( #7399 )
2016-09-13 13:17:38 +02:00
49fb295561
[MRG+2] Fix repr on isotropic kernels when a 1-D length scale is given ( #7259 )
2016-09-03 22:02:07 +10:00
c31ad7ada3
[MRG + 1] [MAINT] Remove non-trivial logic during kernel initialization ( #6963 )
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* Make sure set_params does not break clone on kernels
For example, in kernels such as RBF, using set_params with a
length_scale of different length, used to break clone because of
the non-trivial modification of length_scale in the constructor.
This PR resolves this by moving this logic to __call__ and
making hyperparameter attributes properties.
* Fix tests by using get_params and implement __eq__ for Hyperparameter
* Explain XXX
* Check that hyperparameters are equal after non-trivial set_params
* Refactor into _check_length-scale
2016-08-16 23:43:58 -07:00
d2aaf0f4bb
doc: fix spellings of 'license'
2016-03-31 17:25:31 -07:00
58c859e7ba
Limit the number of thread and force install libgfortran
2016-02-06 18:56:03 +01:00
6470a83f99
MAINT speed up test_kernels
2016-02-06 18:55:23 +01:00
8878088b19
FIX inspect.argspect is deprecated; use signature
2015-10-24 10:27:26 +02:00
e2a340a4ee
REF More meaningful names for hyperparameters of GP kernels
2015-10-19 18:07:14 +02:00
2dd1f285b9
PEP8 Making pep8 and pyflakes happy
2015-10-19 18:07:14 +02:00
98e8093c93
FIX Further python3 related fixes
2015-10-19 18:07:14 +02:00
55d26aa9a6
FIX Fixing test_kernel_theta
2015-10-19 18:07:14 +02:00
f76e64c9c7
FIX Fix failing tests (doctest, order of hyperparameters, pairwise_kernels)
2015-10-19 18:07:14 +02:00
eb54b496d2
REF Removing theta_vars attribute from kernels and using Hyperparameter instances instead
2015-10-19 18:07:14 +02:00
3f1a0f1a5a
TST Adding two unittests for testing GP kernels
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test_kernel_versus_pairwise() checks that GP kernels can also be used as pairwise kernels.
test_set_get_params() checks that set_params()/get_params() is consistent with kernel.theta.
2015-10-19 18:07:14 +02:00
adc7451201
PEP8 Fixing PEP8 issues in gaussian_process package
2015-10-19 18:07:13 +02:00
768c81fd1b
TST Further GP-related fixes
2015-10-19 18:07:13 +02:00
9929b37270
FIX Excluding WhiteKernel from one unit-test
2015-10-19 18:07:12 +02:00
daa90c22d3
ENH Adding Matern kernel for Gaussian Processes
2015-10-19 18:07:12 +02:00
15309a4227
TST Adapting GP tests to changed hyperparameter representation
2015-10-19 18:07:11 +02:00
c961392424
REFACTOR Changed order of l and alpha in RationalQuadratic kernel
2015-10-19 18:07:10 +02:00
e3413b70f7
FIX Kernel property theta can deal with anisotropic RBF kernel
2015-10-19 18:07:10 +02:00
4571a7f648
TST Adapted tests to changes in kernels and added additional test for theta property
2015-10-19 18:07:10 +02:00
1c70e52dd6
ENH Adding diag(X) method to GP kernels.
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Using this method rather than np.diag(kernel(X)) or np.apply_along_axis
reduces memory-consumption and speeds up computation considerably
2015-10-19 18:04:56 +02:00
0210de4225
TST test_kernels tests Exponentiation kernel
2015-10-19 18:04:56 +02:00
752b6b86a9
TST Replace call to deepcopy() by clone()
2015-10-19 18:04:55 +02:00
73b32e3a73
TST Tests for cloning kernels with sklearn.base's clone function
2015-10-19 18:04:55 +02:00
403b5f1412
REFACTOR REnamed kernel property params to theta
2015-10-19 18:04:55 +02:00
9f6e48f6cc
REFACTOR GP kernels use separate specification of bounds and params (no joint param_space)
2015-10-19 18:04:55 +02:00
3ad82d8947
TST Testing kernel stationarity
2015-10-19 18:04:55 +02:00
4d3eb9611a
TST Cover more kernels in tests
2015-10-19 18:04:55 +02:00
5eaa8cf594
ENH Adding PairwiseKernel for GPs (wraps kernels from metrics.pairwise)
2015-10-19 18:04:54 +02:00
03e35758f8
REFACTOR Merging kernel methods auto() and cross() in __call__()
2015-10-19 18:04:54 +02:00
2ab097f0d3
TST Dealing with failing tests from test_common
2015-10-19 18:04:54 +02:00
515defe7a4
REFACTOR auto_correlation() -> auto(), cross_correlation() -> cross()
2015-10-19 18:04:54 +02:00
Nicolas Hug